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PDB: 17822 件

5JVU
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The neck-linker and alpha 7 helix of Drosophila melanogaster kinesin-1 fused to EB1
分子名称: 1,2-ETHANEDIOL, Chimera protein of Kinesin heavy chain and Microtubule-associated protein RP/EB family member 1
著者Phillips, R.K, Rayment, I.
登録日2016-05-11
公開日2016-08-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.948 Å)
主引用文献Family-specific Kinesin Structures Reveal Neck-linker Length Based on Initiation of the Coiled-coil.
J.Biol.Chem., 291, 2016
5JW7
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Crystal structure of SopA-Trim56 complex
分子名称: E3 ubiquitin-protein ligase SopA, E3 ubiquitin-protein ligase TRIM56, ZINC ION
著者Bhogaraju, S, Dikic, I.
登録日2016-05-11
公開日2017-02-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.849 Å)
主引用文献Structural basis for the recognition and degradation of host TRIM proteins by Salmonella effector SopA.
Nat Commun, 8, 2017
3AWK
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BU of 3awk by Molmil
Crystal structure of the polyketide synthase 1 from huperzia serrata
分子名称: Chalcone synthase-like polyketide synthase, GLYCEROL, SULFATE ION
著者Morita, H, Kondo, S, Kato, R, Sugio, S, Kohno, T, Abe, I.
登録日2011-03-23
公開日2011-08-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Synthesis of unnatural alkaloid scaffolds by exploiting plant polyketide synthase.
Proc.Natl.Acad.Sci.USA, 108, 2011
5KD2
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BT_4244 metallopeptidase from Bacteroides thetaiotaomicron
分子名称: 1,2-ETHANEDIOL, ZINC ION, metallopeptidase
著者Noach, I, Boraston, A.B.
登録日2016-06-07
公開日2017-01-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Recognition of protein-linked glycans as a determinant of peptidase activity.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4YOA
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BU of 4yoa by Molmil
Crsystal structure HIV-1 Protease MDR769 L33F Complexed with darunavir
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, HIV-1 Protease
著者Kuiper, B.D, Keusch, B, Dewdney, T.G, Chordia, P, Brunzelle, J.S, Ross, K, Kovari, I.A, MacArthur, R, Salimnia, H, Kovari, L.C.
登録日2015-03-11
公開日2015-07-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.697 Å)
主引用文献The L33F darunavir resistance mutation acts as a molecular anchor reducing the flexibility of the HIV-1 protease 30s and 80s loops.
Biochem Biophys Rep, 2, 2015
5K06
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Recombinant bovine beta-lactoglobulin with uncleaved N-terminal methionine (rBlgB)
分子名称: Beta-lactoglobulin, GLYCEROL, MYRISTIC ACID, ...
著者Loch, J.I, Bonarek, P, Tworzydlo, M, Polit, A, Hawro, B, Lach, A, Ludwin, E, Lewinski, K.
登録日2016-05-17
公開日2016-07-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Engineered beta-Lactoglobulin Produced in E. coli: Purification, Biophysical and Structural Characterisation.
Mol Biotechnol., 58, 2016
4EW1
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BU of 4ew1 by Molmil
High resolution structure of human glycinamide ribonucleotide transformylase in apo form.
分子名称: PHOSPHATE ION, SULFATE ION, Trifunctional purine biosynthetic protein adenosine-3
著者Connelly, S, DeMartino, K, Boger, D.L, Wilson, I.A.
登録日2012-04-26
公開日2013-07-31
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.522 Å)
主引用文献Biological and Structural Evaluation of 10R- and 10S-Methylthio-DDACTHF Reveals a New Role for Sulfur in Inhibition of Glycinamide Ribonucleotide Transformylase.
Biochemistry, 52, 2013
6SA9
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Endogenous Retrovirus HML2 Capsid NTD
分子名称: Endogenous retrovirus group K member 9 Pol protein, GLYCEROL
著者Goldstone, D.C, Ball, N.J, Taylor, I.A.
登録日2019-07-16
公開日2020-01-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for Fullerene geometry in a human endogenous retrovirus capsid.
Nat Commun, 10, 2019
4I25
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2.00 Angstroms X-ray crystal structure of NAD- and substrate-bound 2-aminomuconate 6-semialdehyde dehydrogenase from Pseudomonas fluorescens
分子名称: (2E,4E)-2-amino-6-oxohexa-2,4-dienoic acid, 2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Huo, L, Davis, I, Chen, L, Liu, A.
登録日2012-11-21
公開日2014-05-21
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action.
Nat Commun, 6, 2015
6JCH
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Crystal structure of SpaE basal pilin from Lactobacillus rhamnosus GG - Orthorhombic form
分子名称: Pilus assembly protein, SODIUM ION
著者Megta, A.K, Mishra, A.K, Palva, A, von Ossowski, I, Krishnan, V.
登録日2019-01-28
公開日2019-06-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.536 Å)
主引用文献Crystal structure of basal pilin SpaE reveals the molecular basis of its incorporation in the lactobacillar SpaFED pilus.
J.Struct.Biol., 207, 2019
5KI6
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Human Argonaute-2 bound to a guide RNA with a nucleobase modification at position 1
分子名称: PHENOL, Protein argonaute-2, miR-122
著者Schirle, N.T, MacRae, I.J.
登録日2016-06-16
公開日2016-07-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.153 Å)
主引用文献Structure-Guided Control of siRNA Off-Target Effects.
J.Am.Chem.Soc., 138, 2016
4I5U
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BU of 4i5u by Molmil
Crystal structure of a fungal chimeric cellobiohydrolase Cel6A
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Chimeric cel6A, ...
著者Arnold, F.H, Wu, I.
登録日2012-11-29
公開日2013-04-03
最終更新日2017-08-09
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Engineered thermostable fungal Cel6A and Cel7A cellobiohydrolases hydrolyze cellulose efficiently at elevated temperatures.
Biotechnol.Bioeng., 110, 2013
6SM4
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AntF (apo): type II PKS acyl-carrier protein
分子名称: Acyl carrier protein
著者Braeuer, A, Zhou, Q, Grammbitter, G.L.C, Schmalhofer, M, Ruehl, M, Kaila, V.R.I, Bode, H, Groll, M.
登録日2019-08-21
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural snapshots of the minimal PKS system responsible for octaketide biosynthesis.
Nat.Chem., 12, 2020
6JFO
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Formyl-Met-Ala-Ser bound crystal structure of class II peptide deformylase from methicillin resistant Staphylococcus aureus
分子名称: FME-ALA-SER, MAGNESIUM ION, Peptide deformylase
著者Lee, I.H, Ho, T.H, Kang, L.W.
登録日2019-02-11
公開日2020-02-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Formyl-Met-Ala-Ser bound crystal structure of class II peptide deformylase from methicillin resistant Staphylococcus aureus
To be published
5JTC
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BU of 5jtc by Molmil
Aspartyl/Asparaginyl beta-hydroxylase (AspH)oxygenase and TPR domains in complex with manganese, 2,4-pyridine dicarboxylate and factor X substrate peptide fragment(39mer-4Ser)
分子名称: Aspartyl/asparaginyl beta-hydroxylase, BROMIDE ION, Coagulation factor X, ...
著者McDonough, M.A, Pfeffer, I.
登録日2016-05-09
公開日2017-05-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Aspartate/asparagine-beta-hydroxylase: a high-throughput mass spectrometric assay for discovery of small molecule inhibitors.
Sci Rep, 10, 2020
4EKL
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BU of 4ekl by Molmil
Akt1 with GDC0068
分子名称: (2S)-2-(4-chlorophenyl)-1-{4-[(5R,7R)-7-hydroxy-5-methyl-6,7-dihydro-5H-cyclopenta[d]pyrimidin-4-yl]piperazin-1-yl}-3-(propan-2-ylamino)propan-1-one, RAC-alpha serine/threonine-protein kinase
著者Wu, W.-I, Vigers, G.P.A, Morales, T.H, Brandhuber, B.J.
登録日2012-04-09
公開日2012-05-23
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献An ATP-Site On-Off Switch That Restricts Phosphatase Accessibility of Akt.
Sci.Signal., 5, 2012
5JVM
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BU of 5jvm by Molmil
The neck-linker and alpha 7 helix of Mus musculus KIF3C
分子名称: Chimera protein of Kinesin-like protein KIF3C and Microtubule-associated protein RP/EB family member 1, MAGNESIUM ION
著者Phillips, R.K, Rayment, I.
登録日2016-05-11
公開日2016-08-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.567 Å)
主引用文献Family-specific Kinesin Structures Reveal Neck-linker Length Based on Initiation of the Coiled-coil.
J.Biol.Chem., 291, 2016
5JY0
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Crystal structure of Porphyromonas endodontalis DPP11 in complex with substrate
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Asp/Glu-specific dipeptidyl-peptidase, LEU-ASP-VAL
著者Bezerra, G.A, Cornaciu, I, Hoffmann, G, Djinovic-Carugo, K, Marquez, J.A.
登録日2016-05-13
公開日2017-06-14
最終更新日2017-06-21
実験手法X-RAY DIFFRACTION (2.599 Å)
主引用文献Bacterial protease uses distinct thermodynamic signatures for substrate recognition.
Sci Rep, 7, 2017
4EW3
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BU of 4ew3 by Molmil
The structure of human glycinamide ribonucleotide transformylase in complex with 10R-methylthio-DDATHF.
分子名称: N-({4-[(1R)-4-(2,4-diamino-6-oxo-1,6-dihydropyrimidin-5-yl)-1-(methylsulfanyl)butyl]phenyl}carbonyl)-L-glutamic acid, PHOSPHATE ION, SULFATE ION, ...
著者Connelly, S, DeMartino, K, Boger, D.L, Wilson, I.A.
登録日2012-04-26
公開日2013-07-31
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.702 Å)
主引用文献Biological and Structural Evaluation of 10R- and 10S-Methylthio-DDACTHF Reveals a New Role for Sulfur in Inhibition of Glycinamide Ribonucleotide Transformylase.
Biochemistry, 52, 2013
6M3Y
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Crystal structure of pilus adhesin, SpaC from Lactobacillus rhamnosus GG - open conformation
分子名称: MAGNESIUM ION, Pilus assembly protein
著者Kant, A, Palva, A, von Ossowski, I, Krishnan, V.
登録日2020-03-04
公開日2020-07-29
最終更新日2021-09-15
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Crystal structure of lactobacillar SpaC reveals an atypical five-domain pilus tip adhesin: Exposing its substrate-binding and assembly in SpaCBA pili.
J.Struct.Biol., 211, 2020
2YBH
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Nitrate X-ray induced reduction on HEWL crystals (2.31 MGy).
分子名称: LYSOZYME C, NITRATE ION
著者De la Mora, E, Carmichael, I, Garman, E.F.
登録日2011-03-08
公開日2011-07-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Effective Scavenging at Cryotemperatures: Further Increasing the Dose Tolerance of Protein Crystals.
J.Synchrotron.Radiat., 18, 2011
4GSL
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BU of 4gsl by Molmil
Crystal structure of an Atg7-Atg3 crosslinked complex
分子名称: Autophagy-related protein 3, Ubiquitin-like modifier-activating enzyme ATG7, ZINC ION
著者Kaiser, S.E, Mao, K, Taherbhoy, A.M, Yu, S, Olszewski, J.L, Duda, D.M, Kurinov, I, Deng, A, Fenn, T.D, Klionsky, D.J, Schulman, B.A.
登録日2012-08-27
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.703 Å)
主引用文献Noncanonical E2 recruitment by the autophagy E1 revealed by Atg7-Atg3 and Atg7-Atg10 structures.
Nat.Struct.Mol.Biol., 19, 2012
2YBM
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Nitrate X-ray induced reduction on HEWL crystals (23.3 MGy)
分子名称: LYSOZYME C, NITRIC OXIDE
著者De la Mora, E, Carmichael, I, Garman, E.F.
登録日2011-03-08
公開日2011-07-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Effective Scavenging at Cryotemperatures: Further Increasing the Dose Tolerance of Protein Crystals.
J.Synchrotron.Radiat., 18, 2011
4YJI
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BU of 4yji by Molmil
The Crystal Structure of a Bacterial Aryl Acylamidase Belonging to the Amidase signature (AS) enzymes family
分子名称: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Aryl acylamidase, N-(4-HYDROXYPHENYL)ACETAMIDE (TYLENOL)
著者Choi, I.-G, Lee, S, Park, E.-H, Ko, H.-J, Bang, W.-G.
登録日2015-03-03
公開日2015-11-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Crystal structure analysis of a bacterial aryl acylamidase belonging to the amidase signature enzyme family
Biochem.Biophys.Res.Commun., 467, 2015
4HE9
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Crystal Structure of HIV-1 protease mutants I54M complexed with inhibitor GRL-0519
分子名称: (3R,3aS,3bR,6aS,7aS)-octahydrodifuro[2,3-b:3',2'-d]furan-3-yl [(1S,2R)-1-benzyl-2-hydroxy-3-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}propyl]carbamate, CHLORIDE ION, HIV-1 protease, ...
著者Shen, C.H, Zhang, H, Weber, I.T.
登録日2012-10-03
公開日2013-08-21
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Novel P2 tris-tetrahydrofuran group in antiviral compound 1 (GRL-0519) fills the S2 binding pocket of selected mutants of HIV-1 protease.
J.Med.Chem., 56, 2013

223790

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