Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17892 件

6PVN
DownloadVisualize
BU of 6pvn by Molmil
Cryo-EM structure of mouse TRPV3-Y564A in putative sensitized state at 4 degrees Celsius
分子名称: SODIUM ION, Transient receptor potential cation channel subfamily V member 3
著者Singh, A.K, McGoldrick, L.L, Sobolevsky, A.I.
登録日2019-07-21
公開日2019-10-23
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.07 Å)
主引用文献Structural basis of temperature sensation by the TRP channel TRPV3.
Nat.Struct.Mol.Biol., 26, 2019
6PVL
DownloadVisualize
BU of 6pvl by Molmil
Cryo-EM structure of mouse TRPV3 in closed state at 42 degrees Celsius
分子名称: SODIUM ION, Transient receptor potential cation channel subfamily V member 3
著者Singh, A.K, McGoldrick, L.L, Sobolevsky, A.I.
登録日2019-07-21
公開日2019-10-23
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structural basis of temperature sensation by the TRP channel TRPV3.
Nat.Struct.Mol.Biol., 26, 2019
6PWS
DownloadVisualize
BU of 6pws by Molmil
Crystal structure of the cow C-type carbohydrate-recognition domain of CD23 in the presence of alpha-methyl mannoside
分子名称: CALCIUM ION, Fc fragment of IgE receptor II, methyl alpha-D-mannopyranoside
著者Weis, W.I, Feinberg, H.
登録日2019-07-23
公開日2019-09-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献CD23 is a glycan-binding receptor in some mammalian species.
J.Biol.Chem., 294, 2019
1J1G
DownloadVisualize
BU of 1j1g by Molmil
Crystal structure of the RNase MC1 mutant N71S in complex with 5'-GMP
分子名称: GUANOSINE-5'-MONOPHOSPHATE, Ribonuclease MC1
著者Numata, T, Suzuki, A, Kakuta, Y, Kimura, K, Yao, M, Tanaka, I, Yoshida, Y, Ueda, T, Kimura, M.
登録日2002-12-04
公開日2003-05-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structures of the Ribonuclease MC1 Mutants N71T and N71S in Complex with 5'-GMP: Structural Basis for Alterations in Substrate Specificity
Biochemistry, 42, 2003
5NPJ
DownloadVisualize
BU of 5npj by Molmil
Structure of the Hepatitis C virus strain JFH1 glycoprotein E2 antigenic region 532-540 bound to the single chain variable fragment of the non-neutralizing antibody DAO5
分子名称: Epitope peptide, Single chain variable fragment of the non-neutralizing antibody DAO5
著者Vasiliauskaite, I, Rey, F.A, Krey, T.
登録日2017-04-16
公開日2017-05-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Conformational Flexibility in the Immunoglobulin-Like Domain of the Hepatitis C Virus Glycoprotein E2.
MBio, 8, 2017
6MDZ
DownloadVisualize
BU of 6mdz by Molmil
Human Argonaute2-miR-122 bound to a target RNA with two central mismatches (bu2)
分子名称: PHENOL, Protein argonaute-2, RNA (5'-R(P*AP*AP*AP*CP*AP*CP*CP*AP*UP*UP*UP*CP*CP*AP*CP*AP*CP*UP*CP*CP*AP*AP*A)-3'), ...
著者Sheu-Gruttadauria, J, MacRae, I.J.
登録日2018-09-05
公開日2019-08-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural Basis for Target-Directed MicroRNA Degradation.
Mol.Cell, 75, 2019
4Z2S
DownloadVisualize
BU of 4z2s by Molmil
The crystal structure of Sclerotium Rolfsii lectin variant 2 (SSR2) in complex with N-acetyl-glucosamine
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, ...
著者Kantsadi, A.L, Peppa, V.I, Leonidas, D.D.
登録日2015-03-30
公開日2015-07-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Molecular Cloning, Carbohydrate Specificity and the Crystal Structure of Two Sclerotium rolfsii Lectin Variants.
Molecules, 20, 2015
6SDX
DownloadVisualize
BU of 6sdx by Molmil
Salmonella ATPase InvC with ATP gamma S
分子名称: ATP synthase, GLYCEROL, MAGNESIUM ION, ...
著者Bernal, I, Roemermann, J, Flacht, L, Lunelli, M, Uetrecht, C, Kolbe, M.
登録日2019-07-29
公開日2019-08-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.645 Å)
主引用文献Structural analysis of ligand-bound states of the Salmonella type III secretion system ATPase InvC.
Protein Sci., 28, 2019
6PVM
DownloadVisualize
BU of 6pvm by Molmil
Cryo-EM structure of mouse TRPV3 in putative sensitized state at 42 degrees Celsius
分子名称: SODIUM ION, Transient receptor potential cation channel subfamily V member 3
著者Singh, A.K, McGoldrick, L.L, Sobolevsky, A.I.
登録日2019-07-21
公開日2019-10-23
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structural basis of temperature sensation by the TRP channel TRPV3.
Nat.Struct.Mol.Biol., 26, 2019
5NP2
DownloadVisualize
BU of 5np2 by Molmil
Abl1 SH3 pTyr89/134
分子名称: Tyrosine-protein kinase ABL1
著者Mero, B, Radnai, L, Gogl, G, Leveles, I, Buday, L.
登録日2017-04-13
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural insights into the tyrosine phosphorylation-mediated inhibition of SH3 domain-ligand interactions.
J.Biol.Chem., 294, 2019
5NQX
DownloadVisualize
BU of 5nqx by Molmil
Structure of a fHbp(V1.1):PorA(P1.16) chimera. Fusion at fHbp position 294.
分子名称: Factor H binding protein,Major outer membrane protein P.IA,Factor H binding protein
著者Johnson, S, Jongerius, I, Lea, S.M, Tang, C.M.
登録日2017-04-21
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.66 Å)
主引用文献Structure-based design of chimeric antigens for multivalent protein vaccines.
Nat Commun, 9, 2018
1S5D
DownloadVisualize
BU of 1s5d by Molmil
Cholera holotoxin with an A-subunit Y30S mutation, Crystal form 2
分子名称: Cholera enterotoxin, A chain, GLYCEROL, ...
著者O'Neal, C.J, Amaya, E.I, Jobling, M.G, Holmes, R.K, Hol, W.G.
登録日2004-01-20
公開日2004-04-06
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structures of an intrinsically active cholera toxin mutant yield insight into the toxin activation mechanism
Biochemistry, 43, 2004
4Z4F
DownloadVisualize
BU of 4z4f by Molmil
Human Argonaute2 Bound to t1-DAP Target RNA
分子名称: MAGNESIUM ION, PHENOL, Protein argonaute-2, ...
著者Schirle, N.T, MacRae, I.J.
登録日2015-04-02
公開日2015-09-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Water-mediated recognition of t1-adenosine anchors Argonaute2 to microRNA targets.
Elife, 4, 2015
6QOY
DownloadVisualize
BU of 6qoy by Molmil
Crystal structure of L1 protease Lysobacter sp. XL1 in complex with AEBSF
分子名称: 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, 4-(2-azanylethyl)benzenesulfonic acid, CHLORIDE ION, ...
著者Gabdulkhakov, A, Tishchenko, S, Kudryakova, I, Afoshin, A, Vasilyeva, N.
登録日2019-02-13
公開日2019-12-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Serine bacteriolytic protease L1 of Lysobacter sp. XL1 complexed with protease inhibitor AEBSF: features of interaction
Process Biochem, 2019
4Z4D
DownloadVisualize
BU of 4z4d by Molmil
Human Argonaute2 Bound to t1-G Target RNA
分子名称: ISOPROPYL ALCOHOL, MAGNESIUM ION, PHENOL, ...
著者Schirle, N.T, MacRae, I.J.
登録日2015-04-02
公開日2015-09-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Water-mediated recognition of t1-adenosine anchors Argonaute2 to microRNA targets.
Elife, 4, 2015
6PSE
DownloadVisualize
BU of 6pse by Molmil
Complex of BICD2 with a Dynein Light Intermediate Chain Peptide
分子名称: Cytoplasmic dynein 1 light intermediate chain 1, Protein bicaudal D homolog 2
著者Dominguez, R, Lee, I.G.
登録日2019-07-12
公開日2020-07-15
最終更新日2021-07-28
実験手法X-RAY DIFFRACTION (2.404 Å)
主引用文献A tunable LIC1-adaptor interaction modulates dynein activity in a cargo-specific manner.
Nat Commun, 11, 2020
6QNQ
DownloadVisualize
BU of 6qnq by Molmil
70S ribosome initiation complex (IC) with experimentally assigned potassium ions
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Rozov, A, Khusainov, I, Yusupov, M, Yusupova, G.
登録日2019-02-11
公開日2019-06-19
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Importance of potassium ions for ribosome structure and function revealed by long-wavelength X-ray diffraction.
Nat Commun, 10, 2019
4FWV
DownloadVisualize
BU of 4fwv by Molmil
Crystal structure of the N-terminal domain of the Lon-like protease MtaLonC
分子名称: SULFATE ION, TTC1975 peptidase
著者Chang, C.I, Li, J.K, Kuo, C.I, Huang, K.F.
登録日2012-07-02
公開日2013-06-26
最終更新日2014-03-12
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The N-terminal substrate-recognition domain of a LonC protease exhibits structural and functional similarity to cytosolic chaperones
Acta Crystallogr.,Sect.D, 69, 2013
6FTB
DownloadVisualize
BU of 6ftb by Molmil
Staphylococcus aureus monofunctional glycosyltransferase in complex with moenomycin
分子名称: (2R)-2,3-dihydroxypropyl dodecanoate, 1,2-ETHANEDIOL, MOENOMYCIN, ...
著者Punekar, A.S, Dowson, C.J, Roper, D.I.
登録日2018-02-20
公開日2018-06-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The role of the jaw subdomain of peptidoglycan glycosyltransferases for lipid II polymerization.
Cell Surf, 2, 2018
1RXF
DownloadVisualize
BU of 1rxf by Molmil
DEACETOXYCEPHALOSPORIN C SYNTHASE COMPLEXED WITH FE(II)
分子名称: DEACETOXYCEPHALOSPORIN C SYNTHASE, FE (III) ION
著者Valegard, K, Terwisscha Van Scheltinga, A.C, Lloyd, M.D, Hara, T, Ramaswamy, S, Perrakis, A, Thompson, A, Lee, H.J, Baldwin, J.E, Schofield, C.J, Hajdu, J, Andersson, I.
登録日1998-06-05
公開日1999-06-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of a cephalosporin synthase.
Nature, 394, 1998
5N5C
DownloadVisualize
BU of 5n5c by Molmil
NMR solution structure of the TSL2 RNA hairpin
分子名称: RNA (19-MER)
著者Garcia-Lopez, A, Wacker, A, Tessaro, F, Jonker, H.R.A, Richter, C, Comte, A, Berntenis, N, Schmucki, R, Hatje, K, Sciarra, D, Konieczny, P, Fournet, G, Faustino, I, Orozco, M, Artero, R, Goekjian, P, Metzger, F, Ebeling, M, Joseph, B, Schwalbe, H, Scapozza, L.
登録日2017-02-13
公開日2018-03-14
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Targeting RNA structure in SMN2 reverses spinal muscular atrophy molecular phenotypes.
Nat Commun, 9, 2018
6PVU
DownloadVisualize
BU of 6pvu by Molmil
RNase A in complex with hexametaphosphate
分子名称: 2,4,6,8,10,12-hexahydroxy-2lambda~5~,4lambda~5~,6lambda~5~,8lambda~5~,10lambda~5~,12lambda~5~-cyclohexaphosphoxane-2,4,6,8,10,12-hexone, Ribonuclease pancreatic
著者Windsor, I.W, Sheppard, S.M, Cummins, C.C, Raines, R.T.
登録日2019-07-21
公開日2019-11-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Nucleoside Tetra- and Pentaphosphates Prepared Using a Tetraphosphorylation Reagent Are Potent Inhibitors of Ribonuclease A.
J.Am.Chem.Soc., 141, 2019
6PVW
DownloadVisualize
BU of 6pvw by Molmil
RNase A in complex with cp4pA
分子名称: 2,4,6,8-tetrahydroxy-1,3,5,7,2lambda~5~,4lambda~5~,6lambda~5~,8lambda~5~-tetroxatetraphosphocane-2,4,6,8-tetrone, 5'-O-[(R)-hydroxy{[(4R,8S)-4,6,8-trihydroxy-2,4,6,8-tetraoxo-1,3,5,7,2lambda~5~,4lambda~5~,6lambda~5~,8lambda~5~-tetroxatetraphosphocan-2-yl]oxy}phosphoryl]adenosine, Ribonuclease pancreatic
著者Windsor, I.W, Sheppard, S.M, Cummins, C.C, Raines, R.T.
登録日2019-07-21
公開日2019-11-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Nucleoside Tetra- and Pentaphosphates Prepared Using a Tetraphosphorylation Reagent Are Potent Inhibitors of Ribonuclease A.
J.Am.Chem.Soc., 141, 2019
6PWT
DownloadVisualize
BU of 6pwt by Molmil
Crystal structure of the cow C-type carbohydrate-recognition domain of CD23 in the presence of GlcNAc2Man3 oligosaccharide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose, CALCIUM ION, Fc fragment of IgE receptor II
著者Weis, W.I, Feinberg, H.
登録日2019-07-23
公開日2019-09-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献CD23 is a glycan-binding receptor in some mammalian species.
J.Biol.Chem., 294, 2019
6ME1
DownloadVisualize
BU of 6me1 by Molmil
Crystal structure of the clade B isolate B41 mutant fusion peptide (residues 512-521) in complex with VRC34.01
分子名称: Envelope glycoprotein gp160, VRC34.01 Fab heavy chain, VRC34.01 Fab light chain
著者Kumar, S, Sarkar, A, Wilson, I.A.
登録日2018-09-05
公開日2019-02-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Capturing the inherent structural dynamics of the HIV-1 envelope glycoprotein fusion peptide.
Nat Commun, 10, 2019

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon