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PDB: 17892 results

4Y9W
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Aspartic Proteinase Sapp2 Secreted from Candida Parapsilosis at 0.82 A Resolution.
Descriptor: Aspartic acid endopeptidase Sapp2, PEPTIDE
Authors:Dostal, J, Brynda, J, Hruskova-Heidingsfeldova, O, Rezacova, P, Mareckova, L, Pichova, I.
Deposit date:2015-02-17
Release date:2016-11-30
Last modified:2019-09-04
Method:X-RAY DIFFRACTION (0.83 Å)
Cite:Atomic resolution crystal structure of Sapp2p, a secreted aspartic protease from Candida parapsilosis.
Acta Crystallogr.,Sect.D, 71, 2015
1KGD
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BU of 1kgd by Molmil
Crystal Structure of the Guanylate Kinase-like Domain of Human CASK
Descriptor: FORMIC ACID, PERIPHERAL PLASMA MEMBRANE CASK
Authors:Li, Y, Spangenberg, O, Paarmann, I, Konrad, M, Lavie, A.
Deposit date:2001-11-26
Release date:2001-12-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.314 Å)
Cite:Structural basis for nucleotide-dependent regulation of membrane-associated guanylate kinase-like domains.
J.Biol.Chem., 277, 2002
6B7G
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Solution NMR structure of BCoR in complex with AF9 (BCoR-AF9)
Descriptor: BCL-6 corepressor, Protein AF-9
Authors:Schmidt, C.R, Kuntimaddi, A, Leach, B.I, Bushweller, J.H.
Deposit date:2017-10-04
Release date:2018-10-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:BCOR Binding to MLL-AF9 Is Essential for Leukemia via Altered EYA1, SIX, and MYC Activity.
Blood Cancer Discov, 1, 2020
6R66
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Crystal structure of transthyretin in complex with CHF5075, a flurbiprofen analogue
Descriptor: 1-[4-[3,5-bis(chloranyl)phenyl]-3-fluoranyl-phenyl]cyclopropane-1-carboxylic acid, Transthyretin
Authors:Loconte, V, Menozzi, I, Ferrari, A, Berni, R, Zanotti, G.
Deposit date:2019-03-26
Release date:2019-09-11
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure-activity relationships of flurbiprofen analogues as stabilizers of the amyloidogenic protein transthyretin.
J.Struct.Biol., 208, 2019
6EZR
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BU of 6ezr by Molmil
Crystal structure of GH20 Exo beta-N-Acetylglucosaminidase from Vibrio harveyi
Descriptor: Beta-N-acetylglucosaminidase Nag2
Authors:Porfetye, A.T, Meekrathok, P, Burger, M, Vetter, I.R, Suginta, W.
Deposit date:2017-11-16
Release date:2018-12-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Crystal structure of GH20 Exo beta-N-Acetylglucosaminidase from Vibrio harveyi
To Be Published
4YUN
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Multiconformer synchrotron model of CypA at 310 K
Descriptor: Peptidyl-prolyl cis-trans isomerase A
Authors:Keedy, D.A, Kenner, L.R, Warkentin, M, Woldeyes, R.A, Thompson, M.C, Brewster, A.S, Van Benschoten, A.H, Baxter, E.L, Hopkins, J.B, Uervirojnangkoorn, M, McPhillips, S.E, Song, J, Mori, R.A, Holton, J.M, Weis, W.I, Brunger, A.T, Soltis, M, Lemke, H, Gonzalez, A, Sauter, N.K, Cohen, A.E, van den Bedem, H, Thorne, R.E, Fraser, J.S.
Deposit date:2015-03-18
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
1ZTB
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Crystal Structure of Chorismate Synthase from Mycobacterium tuberculosis
Descriptor: Chorismate synthase
Authors:Dias, M.V.B, Borges, J.C, Ely, F, Pereira, J.H, Canduri, F, Ramos, C.H.I, Frazzon, J, Palma, M.S, Basso, L.A, Santos, D.S, Azevedo Jr, W.F.
Deposit date:2005-05-26
Release date:2006-05-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure of chorismate synthase from Mycobacterium tuberculosis
J.Struct.Biol., 154, 2006
3CQG
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Nucleoporin Nup107/Nup133 interaction complex, delta finger mutant
Descriptor: Nuclear pore complex protein Nup107, Nuclear pore complex protein Nup133
Authors:Jeudy, S, Boehmer, T, Berke, I, Schwartz, T.U.
Deposit date:2008-04-02
Release date:2008-07-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and functional studies of Nup107/Nup133 interaction and its implications for the architecture of the nuclear pore complex.
Mol.Cell, 30, 2008
6B1Q
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Hydrogen Bonding Complementary, not size complementarity is key in the formation of the double helix
Descriptor: DNA (5'-D(*CP*TP*TP*AP*TP*(CJ1)P*(CJ1)P*(CJ1))-3'), DNA (5'-D(P*(1AP)P*(1AP)P*(1AP)P*AP*TP*AP*AP*G)-3'), Reverse transcriptase
Authors:Singh, I, Georgiadis, M.M.
Deposit date:2017-09-18
Release date:2018-09-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:"Skinny" and "Fat" DNA: Two New Double Helices.
J. Am. Chem. Soc., 140, 2018
7JI0
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BU of 7ji0 by Molmil
CryoEM structure of Streptococcus thermophilus SHP pheromone receptor Rgg3 in complex with SHP3
Descriptor: Positive transcriptional regulator MutR family, SHP3
Authors:Petrou, V.I, Capodagli, G.C, Kaelber, J.T, Neiditch, M.B.
Deposit date:2020-07-21
Release date:2020-10-07
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structure-function studies of Rgg binding to pheromones and target promoters reveal a model of transcription factor interplay.
Proc.Natl.Acad.Sci.USA, 117, 2020
6F63
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Crystal structure of the SYCP1 C-terminal back-to-back assembly
Descriptor: Synaptonemal complex protein 1
Authors:Dunce, J.M, Millan, C, Uson, I, Davies, O.R.
Deposit date:2017-12-04
Release date:2018-06-06
Last modified:2020-04-22
Method:X-RAY DIFFRACTION (2.154 Å)
Cite:Structural basis of meiotic chromosome synapsis through SYCP1 self-assembly.
Nat. Struct. Mol. Biol., 25, 2018
1KM8
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BU of 1km8 by Molmil
The Structure of a Cytotoxic Ribonuclease From the Oocyte of Rana Catesbeiana (Bullfrog)
Descriptor: PHOSPHATE ION, RIBONUCLEASE, OOCYTES
Authors:Chern, S.-S, Musayev, F.N, Amiraslanov, I.R, Liao, Y.-D, Liaw, Y.-C.
Deposit date:2001-12-14
Release date:2003-09-09
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Structure of a Cytotoxic Ribonuclease From the Oocyte of Rana Catesbeiana (Bullfrog)
To be Published
2BL7
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BU of 2bl7 by Molmil
1.6 Angstrom crystal structure of EntA-im: a bacterial immunity protein conferring immunity to the antimicrobial activity of the pediocin-like bacteriocin, enterocin A
Descriptor: ENTEROCINE A IMMUNITY PROTEIN
Authors:Johnsen, L, Dalhus, B, Leiros, I, Nissen-Meyer, J.
Deposit date:2005-03-02
Release date:2005-03-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:1.6-A Crystal Structure of Enta-Im: A Bacterial Immunity Protein Conferring Immunity to the Antimicrobial Activity of the Pediocin-Like Bacteriocin Enterocin A
J.Biol.Chem., 280, 2005
6B9H
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Complex of Hook Domain with a Dynein Light Intermediate Chain Peptide
Descriptor: Cytoplasmic dynein 1 light intermediate chain 1, Protein Hook homolog 3
Authors:Lee, I.G, Dominguez, R.
Deposit date:2017-10-10
Release date:2018-03-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A conserved interaction of the dynein light intermediate chain with dynein-dynactin effectors necessary for processivity.
Nat Commun, 9, 2018
2BOU
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EGF Domains 1,2,5 of human EMR2, a 7-TM immune system molecule, in complex with barium.
Descriptor: BARIUM ION, CACODYLATE ION, CALCIUM ION, ...
Authors:Abbott, R.J.M, Spendlove, I, Roversi, P, Teriete, P, Knott, V, Handford, P.A, McDonnell, J.M, Lea, S.M.
Deposit date:2005-04-14
Release date:2006-10-18
Last modified:2017-01-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Functional Characterization of a Novel T Cell Receptor Co-Regulatory Protein Complex, Cd97-Cd55.
J.Biol.Chem., 282, 2007
4YOB
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Crystal Structure of Apo HIV-1 Protease MDR769 L33F
Descriptor: HIV-1 Protease
Authors:Kuiper, B.D, Keusch, B, Dewdney, T.G, Chordia, P, Ross, K, Brunzelle, J.S, Kovari, I.A, MacArthur, R, Salimnia, H, Kovari, L.C.
Deposit date:2015-03-11
Release date:2015-07-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.504 Å)
Cite:The L33F darunavir resistance mutation acts as a molecular anchor reducing the flexibility of the HIV-1 protease 30s and 80s loops.
Biochem Biophys Rep, 2, 2015
7GSP
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BU of 7gsp by Molmil
RIBONUCLEASE T1/2',3'-CGPS, NON-PRODUCTIVE
Descriptor: GUANOSINE-2',3'-CYCLOPHOSPHOROTHIOATE, PHOSPHATE ION, RIBONUCLEASE T1
Authors:Zegers, I, Wyns, L.
Deposit date:1997-12-10
Release date:1998-03-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Hydrolysis of a slow cyclic thiophosphate substrate of RNase T1 analyzed by time-resolved crystallography.
Nat.Struct.Biol., 5, 1998
6BBD
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Structure of N-glycosylated porcine surfactant protein-D complexed with glycerol
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ...
Authors:van Eijk, M, Rynkiewicz, M.J, Khatri, K, Leymarie, N, Zaia, J, White, M.R, Hartshorn, K.L, Cafarella, T.R, van Die, I, Hessing, M, Seaton, B.A, Haagsman, H.P.
Deposit date:2017-10-18
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Lectin-mediated binding and sialoglycans of porcine surfactant protein D synergistically neutralize influenza A virus.
J. Biol. Chem., 293, 2018
2BXD
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BU of 2bxd by Molmil
Human serum albumin complexed with warfarin
Descriptor: R-WARFARIN, SERUM ALBUMIN
Authors:Ghuman, J, Zunszain, P.A, Petitpas, I, Bhattacharya, A.A, Curry, S.
Deposit date:2005-07-26
Release date:2005-09-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural Basis of the Drug-Binding Specificity of Human Serum Albumin.
J.Mol.Biol., 353, 2005
4YLS
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BU of 4yls by Molmil
Tubulin Glutamylase
Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Tubulin polyglutamylase TTLL7
Authors:Garnham, C.P, Vemu, A, Wilson-Kubalek, E.M, Yu, I, Szyk, A, Lander, G.C, Milligan, R.A, Roll-Mecak, A.
Deposit date:2015-03-05
Release date:2015-06-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Multivalent Microtubule Recognition by Tubulin Tyrosine Ligase-like Family Glutamylases.
Cell, 161, 2015
6EZS
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BU of 6ezs by Molmil
Crystal structure of GH20 Exo beta-N-Acetylglucosaminidase from Vibrio harveyi in complex with N-acetylglucosamine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-N-acetylglucosaminidase Nag2, MALONATE ION
Authors:Porfetye, A.T, Meekrathok, P, Burger, M, Vetter, I.R, Suginta, W.
Deposit date:2017-11-16
Release date:2018-12-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of GH20 Exo beta-N-Acetylglucosaminidase from Vibrio harveyi
To Be Published
2BS7
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Crystal structure of F17b-G in complex with chitobiose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, F17BG LECTIN
Authors:Buts, L, Wellens, A, Van Molle, I, Wyns, L, Loris, R, Lahmann, M, Oscarson, S, De Greve, H, Bouckaert, J.
Deposit date:2005-05-18
Release date:2006-05-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Impact of Natural Variation in Bacterial F17G Adhesins on Crystallization Behaviour.
Acta Crystallogr.,Sect.D, 61, 2005
7JFQ
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BU of 7jfq by Molmil
The crystal structure of 3CL MainPro of SARS-CoV-2 with de-oxidized C145
Descriptor: 1,2-ETHANEDIOL, 3C-like proteinase, FORMIC ACID
Authors:Tan, K, Maltseva, N.I, Welk, L.F, Jedrzejczak, R.P, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-07-17
Release date:2020-07-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The crystal structure of 3CL MainPro of SARS-CoV-2 with de-oxidized C145
To Be Published
4YPM
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Crystal structure of a LonA protease domain in complex with bortezomib
Descriptor: CITRIC ACID, DI(HYDROXYETHYL)ETHER, Lon protease, ...
Authors:Lin, C.-C, Chang, C.-I.
Deposit date:2015-03-13
Release date:2016-03-16
Last modified:2016-05-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Basis for the Magnesium-Dependent Activation and Hexamerization of the Lon AAA+ Protease
Structure, 24, 2016
4YUM
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Multiconformer synchrotron model of CypA at 300 K
Descriptor: Peptidyl-prolyl cis-trans isomerase A
Authors:Keedy, D.A, Kenner, L.R, Warkentin, M, Woldeyes, R.A, Thompson, M.C, Brewster, A.S, Van Benschoten, A.H, Baxter, E.L, Hopkins, J.B, Uervirojnangkoorn, M, McPhillips, S.E, Song, J, Mori, R.A, Holton, J.M, Weis, W.I, Brunger, A.T, Soltis, M, Lemke, H, Gonzalez, A, Sauter, N.K, Cohen, A.E, van den Bedem, H, Thorne, R.E, Fraser, J.S.
Deposit date:2015-03-18
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015

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