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PDB: 326 results

1M8S
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Crystal Structures of Cadmium-binding Acidic Phospholipase A2 from the Venom of Agkistrodon halys pallas at 1.9 Resolution (crystal grown at pH 5.9)
Descriptor: 1,4-BUTANEDIOL, CADMIUM ION, phospholipase a2
Authors:Xu, S, Gu, L, Zhou, Y, Lin, Z.
Deposit date:2002-07-25
Release date:2003-02-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of cadmium-binding acidic phospholipase A(2) from the venom of Agkistrodon halys Pallas at 1.9A resolutio
Biochem.Biophys.Res.Commun., 300, 2003
3ZJU
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Ternary complex of E .coli leucyl-tRNA synthetase, tRNA(Leu) and the benzoxaborole AN3016 in the editing conformation
Descriptor: LEUCYL-TRNA SYNTHETASE, MAGNESIUM ION, TRNALEU5 UAA ISOACCEPTOR
Authors:Cusack, S, Palencia, A, Crepin, T, Hernandez, V, Akama, T, Baker, S.J, Bu, W, Feng, L, Freund, Y.R, Liu, L, Meewan, M, Mohan, M, Mao, W, Rock, F.L, Sexton, H, Sheoran, A, Zhang, Y, Zhang, Y, Zhou, Y, Nieman, J.A, Anugula, M.R, Keramane, E.M, Savariraj, K, Reddy, D.S, Sharma, R, Subedi, R, Singh, R, OLeary, A, Simon, N.L, DeMarsh, P.L, Mushtaq, S, Warner, M, Livermore, D.M, Alley, M.R.K, Plattner, J.J.
Deposit date:2013-01-18
Release date:2013-04-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery of a Novel Class of Boron-Based Antibacterials with Activity Against Gram-Negative Bacteria.
Antimicrob.Agents Chemother., 57, 2013
7VO5
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Pimaricin type I PKS thioesterase domain (holo Pim TE)
Descriptor: (1R,3S,5E,7S,11R,13E,15E,17E,19E,21R,23S,24R,25S)-11,24-dimethyl-1,3,7,21,25-pentakis(oxidanyl)-10,27-dioxabicyclo[21.3.1]heptacosa-5,13,15,17,19-pentaen-9-one, ScnS4
Authors:Bai, L, Zhou, Y.
Deposit date:2021-10-12
Release date:2022-01-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and Mechanistic Insights into Chain Release of the Polyene PKS Thioesterase Domain
Acs Catalysis, 12, 2022
7VO4
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Pimaricin type I PKS thioesterase domain (apo Pim TE)
Descriptor: SULFATE ION, ScnS4
Authors:Bai, L, Zhou, Y.
Deposit date:2021-10-12
Release date:2022-01-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Mechanistic Insights into Chain Release of the Polyene PKS Thioesterase Domain
Acs Catalysis, 12, 2022
7VRG
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Crystal structure of chitinase-h from O. furnacalis in complex with Lynamicin B
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase, ...
Authors:Lu, Q, Liu, T, Zhou, Y, Yang, Q.
Deposit date:2021-10-22
Release date:2022-03-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Lynamicin B is a Potential Pesticide by Acting as a Lepidoptera-Exclusive Chitinase Inhibitor.
J.Agric.Food Chem., 69, 2021
8JBP
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BU of 8jbp by Molmil
Crystal structure of triosephosphate isomerase from Leishmania orientalis at 1.45 angstroms resolution with an arsenic atom bound at Cys57
Descriptor: ARSENIC, Triosephosphate isomerase
Authors:Kuaprasert, B, Leartsakulpanich, U, Riangrungroj, P, Pornthanakasem, W, Suginta, W, Robinson, R.C, Zhou, Y, Mungthin, M, Leelayoova, S, Saehlee, S, Choowongkomon, K.
Deposit date:2023-05-09
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Leishmania orientalis triosephosphate isomerase crystal structure at 1.45 angstroms resolution and its potential specific inhibitors
To be published
3WQV
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Crystal structure of Ostrinia furnacalis Group I chitinase catalytic domain in complex with a(GlcN)5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Chen, L, Zhou, Y, Yang, Q.
Deposit date:2014-02-03
Release date:2014-05-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.043 Å)
Cite:Fully deacetylated chitooligosaccharides act as efficient glycoside hydrolase family 18 chitinase inhibitors.
J.Biol.Chem., 289, 2014
2XNI
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Protein-ligand complex of a novel macrocyclic HCV NS3 protease inhibitor derived from amino cyclic boronates
Descriptor: (1-{[(10-tert-butyl-15,15-dimethyl-3,9,12-trioxo-6,7,9,10,11,12,14,15,16,17,18,19,23,23a-tetradecahydro-1H,5H-2,23:5,8-dimethano-4,13,2,8,11-benzodioxatriazacyclohenicosin-7(3H)-yl)carbonyl]amino}-3-hydroxypropyl)(trihydroxy)borate(1-), MAGNESIUM ION, NS3 PROTEASE, ...
Authors:Li, X, Zhang, Y.-K, Liu, Y, Ding, C.Z, Zhou, Y, Li, Q, Plattner, J.J, Baker, S.J, Zhang, S, Kazmierski, W.M, Wright, L.L, Smith, G.K, Grimes, R.M, Crosby, R.M, Creech, K.L, Carballo, L.H, Slater, M.J, Jarvest, R.L, Thommes, P, Hubbard, J.A, Convery, M.A, Nassau, P.M, McDowell, W, Skarzynski, T.J, Qian, X, Fan, D, Liao, L, Ni, Z.-J, Pennicott, L.E, Zou, W, Wright, J.
Deposit date:2010-08-02
Release date:2011-08-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Novel Macrocyclic Hcv Ns3 Protease Inhibitors Derived from Alpha-Amino Cyclic Boronates.
Bioorg.Med.Chem.Lett., 20, 2010
2XCF
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Crystal structure of HCV NS3 protease with a boronate inhibitor
Descriptor: CYCLOPENTYL N-[(2S)-1-[(2S,4R)-2-[[(4R)-8-HYDROXY-1,6,10-TRIOXA-5$L^{4}-BORASPIRO[4.5]DECAN-4-YL]CARBAMOYL]-4-ISOQUINOLIN-1-YLOXY-PYRROLIDIN-1-YL]-3,3-DIMETHYL-1-OXO-BUTAN-2-YL]CARBAMATE, MAGNESIUM ION, NS3 PROTEASE, ...
Authors:Li, X, Zhang, Y.-K, Liu, Y, Ding, C.Z, Li, Q, Zhou, Y, Plattner, J.J, Baker, S.J, Qian, X, Fan, D, Liao, L, Ni, Z.-J, White, G.V, Mordaunt, J.E, Lazarides, L.X, Slater, M.J, Jarvest, R.L, Thommes, P, Ellis, M, Edge, C.M, Hubbard, J.A, Nassau, P, McDowell, B, Skarzynski, T.J, Rowland, P, Somers, D.O, Kazmierski, W.M, Grimes, R.M, Wright, L.L, Smith, G.K, Zou, W, Wright, J, Pennicott, L.E.
Deposit date:2010-04-22
Release date:2010-06-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Synthesis and Evaluation of Novel Alpha-Amino Cyclic Boronates as Inhibitors of Hcv Ns3 Protease.
Bioorg.Med.Chem.Lett., 20, 2010
7YFN
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Core module of the NuA4 complex in S. cerevisiae
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ARP4 isoform 1, Actin, ...
Authors:Ji, L.T, Zhao, L.X, Xu, K, Gao, H.H, Zhou, Y, Kornberg, R.D, Zhang, H.Q.
Deposit date:2022-07-08
Release date:2023-03-08
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of the NuA4 histone acetyltransferase complex.
Proc.Natl.Acad.Sci.USA, 119, 2022
7YFP
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The NuA4 histone acetyltransferase complex from S. cerevisiae
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ARP4 isoform 1, Actin, ...
Authors:Ji, L.T, Zhao, L.X, Xu, K, Gao, H.H, Zhou, Y, Kornberg, R.D, Zhang, H.Q.
Deposit date:2022-07-08
Release date:2023-04-19
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of the NuA4 histone acetyltransferase complex.
Proc.Natl.Acad.Sci.USA, 119, 2022
1KGS
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BU of 1kgs by Molmil
Crystal Structure at 1.50 A of an OmpR/PhoB Homolog from Thermotoga maritima
Descriptor: DNA BINDING RESPONSE REGULATOR D, THIOCYANATE ION
Authors:Buckler, D.R, Zhou, Y, Stock, A.M.
Deposit date:2001-11-28
Release date:2001-12-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Evidence of intradomain and interdomain flexibility in an OmpR/PhoB homolog from Thermotoga maritima.
Structure, 10, 2002
2XCN
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BU of 2xcn by Molmil
Crystal structure of HCV NS3 protease with a boronate inhibitor
Descriptor: MAGNESIUM ION, N-[(CYCLOPENTYLOXY)CARBONYL]-3-METHYL-L-VALYL-(4R)-N-{(1R)-3-HYDROXY-1-[HYDROXY(OXIDO)BORANYL]PROPYL}-4-(ISOQUINOLIN-1-YLOXY)-L-PROLINAMIDE, NS3 PROTEASE, ...
Authors:Li, X, Zhang, Y.-K, Liu, Y, Ding, C.Z, Li, Q, Zhou, Y, Plattner, J.J, Baker, S.J, Qian, X, Fan, D, Liao, L, Ni, Z.-J, White, G.V, Mordaunt, J.E, Lazarides, L.X, Slater, M.J, Jarvest, R.L, Thommes, P, Ellis, M, Edge, C.M, Hubbard, J.A, Nassau, P, McDowell, B, Skarzynski, T.J, Rowland, P, Somers, D.O, Kazmierski, W.M, Grimes, R.M, Wright, L.L, Smith, G.K, Zou, W, Wright, J, Pennicott, L.E.
Deposit date:2010-04-23
Release date:2010-06-02
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Synthesis and Evaluation of Novel Alpha-Amino Cyclic Boronates as Inhibitors of Hcv Ns3 Protease.
Bioorg.Med.Chem.Lett., 20, 2010
3WL1
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Crystal structure of Ostrinia furnacalis Group I chitinase catalytic domain in complex with reaction products (GlcNAc)2,3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Chen, L, Liu, T, Zhou, Y, Chen, Q, Shen, X, Yang, Q.
Deposit date:2013-11-05
Release date:2014-04-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.772 Å)
Cite:Structural characteristics of an insect group I chitinase, an enzyme indispensable to moulting.
Acta Crystallogr.,Sect.D, 70, 2014
3WMB
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BU of 3wmb by Molmil
Crystal structure of insect beta-N-acetyl-D-hexosaminidase OfHex1 complexed with naphthalimide derivative Q1
Descriptor: 2-(2-{[(5-methyl-1,3,4-thiadiazol-2-yl)methyl]amino}ethyl)-1H-benzo[de]isoquinoline-1,3(2H)-dione, 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-hexosaminidase
Authors:Liu, T, Zhou, Y, Chen, L, Yang, Q.
Deposit date:2013-11-16
Release date:2014-11-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A crystal structure-guided rational design switching non-carbohydrate inhibitors' specificity between two beta-GlcNAcase homologs
Sci Rep, 4, 2014
3X21
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Crystal structure of Escherichia coli nitroreductase NfsB mutant T41L/N71S/F124W
Descriptor: FLAVIN MONONUCLEOTIDE, Oxygen-insensitive NAD(P)H nitroreductase
Authors:Bai, J, Yang, J, Zhou, Y, Yang, Q.
Deposit date:2014-12-06
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:Altering the regioselectivity of a nitroreductase in the synthesis of arylhydroxylamines by structure-based engineering.
Chembiochem, 16, 2015
3WZF
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Crystal structure of human cytoplasmic aspartate aminotransferase
Descriptor: Aspartate aminotransferase, cytoplasmic
Authors:Jiang, X, Chang, H, Zhou, Y, Chen, L, Yang, Q.
Deposit date:2014-09-24
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.991 Å)
Cite:Recombinant expression, purification and Preliminary crystallographic studies of human cytoplasmic aspartate aminotransferase
To be Published
3X22
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Crystal structure of Escherichia coli nitroreductase NfsB mutant N71S/F123A/F124W
Descriptor: FLAVIN MONONUCLEOTIDE, Oxygen-insensitive NAD(P)H nitroreductase
Authors:Bai, J, Yang, J, Zhou, Y, Yang, Q.
Deposit date:2014-12-06
Release date:2015-11-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural basis of Escherichia coli nitroreductase NfsB triple mutants engineered for improved activity and regioselectivity toward the prodrug CB1954
PROCESS BIOCHEM, 50, 2015
1IJL
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BU of 1ijl by Molmil
Crystal structure of acidic phospholipase A2 from deinagkistrodon acutus
Descriptor: CALCIUM ION, PHOSPHOLIPASE A2, ZINC ION
Authors:Gu, L, Zhang, H, Song, S, Zhou, Y, Lin, Z.
Deposit date:2001-04-27
Release date:2001-12-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of an acidic phospholipase A2 from the venom of Deinagkistrodon acutus.
Acta Crystallogr.,Sect.D, 58, 2002
1JVM
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BU of 1jvm by Molmil
KCSA POTASSIUM CHANNEL WITH TBA (TETRABUTYLAMMONIUM) AND RUBIDIUM
Descriptor: RUBIDIUM ION, TETRABUTYLAMMONIUM ION, Voltage-gated potassium channel
Authors:Morais-Cabral, J.H, Zhou, Y, MacKinnon, R.
Deposit date:2001-08-30
Release date:2001-12-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Energetic optimization of ion conduction rate by the K+ selectivity filter.
Nature, 414, 2001
3S96
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Crystal structure of 3B5H10
Descriptor: 3B5H10 FAB heavy chain, 3B5H10 FAB light chain
Authors:Weisgraber, K, Peters-Libeu, C, Rutenber, E, Newhouse, Y, Finkbeiner, S.
Deposit date:2011-05-31
Release date:2012-02-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Disease-associated polyglutamine stretches in monomeric huntingtin adopt a compact structure.
J.Mol.Biol., 421, 2012
1CXV
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STRUCTURE OF RECOMBINANT MOUSE COLLAGENASE-3 (MMP-13)
Descriptor: 2-{4-[4-(4-CHLORO-PHENOXY)-BENZENESULFONYL]-TETRAHYDRO-PYRAN-4-YL}-N-HYDROXY-ACETAMIDE, CALCIUM ION, PROTEIN (COLLAGENASE-3), ...
Authors:Botos, I, Meyer, E, Swanson, S.M, Lemaitre, V, Eeckhout, Y, Meyer, E.F.
Deposit date:1999-08-30
Release date:2000-08-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of recombinant mouse collagenase-3 (MMP-13).
J.Mol.Biol., 292, 1999
1C1J
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STRUCTURE OF CADMIUM-SUBSTITUTED PHOSPHOLIPASE A2 FROM AGKISTRONDON HALYS PALLAS AT 2.8 ANGSTROMS RESOLUTION
Descriptor: BASIC PHOSPHOLIPASE A2, CADMIUM ION, octyl beta-D-glucopyranoside
Authors:Zhang, H.-l, Zhang, Y.-q, Song, S.-y, Zhou, Y, Lin, Z.-j.
Deposit date:1999-07-22
Release date:2002-07-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of Cadmium-substituted Phospholipase A2 from Agkistrodon halys Pallas at 2.8 Angstroms Resolution
Protein Pept.Lett., 6, 1999
1BK9
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PHOSPHOLIPASE A2 MODIFIED BY PBPB
Descriptor: 1,4-BUTANEDIOL, CALCIUM ION, PHOSPHOLIPASE A2, ...
Authors:Zhao, H, Tang, L, Wang, X, Lin, Z, Zhou, Y.
Deposit date:1998-07-16
Release date:1999-03-02
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a snake venom phospholipase A2 modified by p-bromo-phenacyl-bromide.
Toxicon, 36, 1998
1YA9
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Crystal Structure of the 22kDa N-Terminal Fragment of Mouse Apolipoprotein E
Descriptor: Apolipoprotein E
Authors:Peters-Libeu, C.A, Rutenber, E, Newhouse, Y, Hatters, D.M, Weisgraber, K.H.
Deposit date:2004-12-17
Release date:2005-06-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Engineering conformational destabilization into mouse apolipoprotein E. A model for a unique property of human apolipoprotein E4
J.Biol.Chem., 280, 2005

233605

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