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PDB: 164 results

2BNY
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MS2 (N87A mutant) - RNA hairpin complex
Descriptor: 5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *UP*AP*CP*CP*CP*AP*UP*GP*U)-3', MS2 COAT PROTEIN
Authors:Horn, W.T, Tars, K, Grahn, E, Helgstrand, C, Baron, A.J, Lago, H, Adams, C.J, Peabody, D.S, Phillips, S.E.V, Stonehouse, N.J, Liljas, L, Stockley, P.G.
Deposit date:2005-04-06
Release date:2006-03-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis of RNA Binding Discrimination between Bacteriophages Qbeta and MS2.
Structure, 14, 2006
2BQ5
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MS2 (N87AE89K mutant) - RNA hairpin complex
Descriptor: 5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *UP*AP*CP*CP*CP*AP*UP*GP*U)-3', COAT PROTEIN
Authors:Horn, W.T, Tars, K, Grahn, E, Helgstrand, C, Baron, A.J, Lago, H, Adams, C.J, Peabody, D.S, Phillips, S.E.V, Stonehouse, N.J, Liljas, L, Stockley, P.G.
Deposit date:2005-04-27
Release date:2006-03-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Structural Basis of RNA Binding Discrimination between Bacteriophages Qbeta and MS2.
Structure, 14, 2006
5A4F
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The mechanism of Hydrogen Activation by NiFe-hydrogenases.
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, CHLORIDE ION, FE3-S4 CLUSTER, ...
Authors:Evans, R.M, Brooke, E.J, Wehlin, S.A.M, Nomerotskaia, E, Sargent, F, Carr, S.B, Phillips, S.E.V, Armstrong, F.A.
Deposit date:2015-06-09
Release date:2015-11-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Mechanism of hydrogen activation by [NiFe] hydrogenases.
Nat. Chem. Biol., 12, 2016
2BFV
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MONOCLONAL ANTIBODY FRAGMENT FV4155 FROM E. COLI
Descriptor: ESTRIOL 3-(B-D-GLUCURONIDE), FV4155
Authors:Trinh, C.H, Phillips, S.E.V.
Deposit date:1997-05-27
Release date:1997-12-03
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Antibody fragment Fv4155 bound to two closely related steroid hormones: the structural basis of fine specificity.
Structure, 5, 1997
2B2D
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RNA stemloop operator from bacteriophage QBETA complexed with an N87S,E89K mutant MS2 capsid
Descriptor: 5'-R(*AP*UP*GP*CP*AP*UP*GP*UP*CP*UP*AP*AP*GP*AP*CP*AP*GP*CP*AP*U)-3', Coat protein
Authors:Horn, W.T, Tars, K, Grahn, E, Helgstrand, C, Baron, A.J, Lago, H, Adams, C.J, Peabody, D.S, Phillips, S.E.V, Stonehouse, N.J, Liljas, L, Stockley, P.G.
Deposit date:2005-09-19
Release date:2006-05-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of RNA binding discrimination between bacteriophages Qbeta and MS2
Structure, 14, 2006
2B2E
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RNA stemloop from bacteriophage MS2 complexed with an N87S,E89K mutant MS2 capsid
Descriptor: 5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*UP*GP*U)-3', Coat protein
Authors:Horn, W.T, Tars, K, Grahn, E, Helgstrand, C, Baron, A.J, Lago, H, Adams, C.J, Peabody, D.S, Phillips, S.E.V, Stonehouse, N.J, Liljas, L, Stockley, P.G.
Deposit date:2005-09-19
Release date:2006-05-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural basis of RNA binding discrimination between bacteriophages Qbeta and MS2
Structure, 14, 2006
2B2G
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MS2 Wild-type RNA stemloop complexed with an N87S mutant MS2 capsid
Descriptor: 5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*UP*GP*U)-3', Coat protein
Authors:Horn, W.T, Tars, K, Grahn, E, Helgstrand, C, Baron, A.J, Lago, H, Adams, C.J, Peabody, D.S, Phillips, S.E.V, Stonehouse, N.J, Liljas, L, Stockley, P.G.
Deposit date:2005-09-19
Release date:2006-05-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Structural basis of RNA binding discrimination between bacteriophages Qbeta and MS2
Structure, 14, 2006
4CWE
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Structural studies of rolling circle replication initiation protein from Staphylococcus aureus
Descriptor: REPLICATION INITIATION PROTEIN
Authors:Carr, S.B, Phillips, S.E.V, Thomas, C.D.
Deposit date:2014-04-02
Release date:2015-04-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of Replication Initiation Proteins from Staphylococcal Antibiotic Resistance Plasmids Reveal Protein Asymmetry and Flexibility are Necessary for Replication.
Nucleic Acids Res., 44, 2016
4CWC
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Structure of Rolling Circle Replication Initiator Protein (RepDE) from Staphylococcus aureus
Descriptor: REPLICATION INITIATION PROTEIN
Authors:Carr, S.B, Phillips, S.E.V, Thomas, C.D.
Deposit date:2014-04-02
Release date:2015-04-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of Replication Initiation Proteins from Staphylococcal Antibiotic Resistance Plasmids Reveal Protein Asymmetry and Flexibility are Necessary for Replication.
Nucleic Acids Res., 44, 2016
4AUN
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Crystal structure, recombinant expression and mutagenesis studies of the bifunctional catalase-phenol oxidase from Scytalidium thermophilum
Descriptor: CALCIUM ION, CATALASE-PHENOL OXIDASE, CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE
Authors:Yuzugullu, Y, Trinh, C.H, Smith, M.A, Pearson, A.R, Phillips, S.E.V, Sutay Kocabas, D, Bakir, U, Ogel, Z.B, McPherson, M.J.
Deposit date:2012-05-18
Release date:2013-02-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structure, Recombinant Expression and Mutagenesis Studies of the Catalase with Oxidase Activity from Scytalidium Thermophilum
Acta Crystallogr.,Sect.D, 69, 2013
1YP7
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Van der Waals Interactions Dominate Hydrophobic Association in a Protein Binding Site Occluded From Solvent Water
Descriptor: CADMIUM ION, MAJOR URINARY PROTEIN 1
Authors:Barratt, E, Bingham, R.J, Warner, D.J, Laughton, C.A, Phillips, S.E.V, Homans, S.W.
Deposit date:2005-01-30
Release date:2005-08-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Van der Waals Interactions Dominate Ligand-Protein Association in a Protein Binding Site Occluded from Solvent Water
J.Am.Chem.Soc., 127, 2005
1YP6
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Van der Waals Interactions Dominate Hydrophobic Association in a Protein Binding Site Occluded From Solvent Water
Descriptor: 2-ISOBUTYL-3-METHOXYPYRAZINE, CADMIUM ION, CHLORIDE ION, ...
Authors:Barratt, E, Bingham, R.J, Warner, D.J, Laughton, C.A, Phillips, S.E.V, Homans, S.W.
Deposit date:2005-01-30
Release date:2005-08-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Van der Waals Interactions Dominate Ligand-Protein Association in a Protein Binding Site Occluded from Solvent Water
J.Am.Chem.Soc., 127, 2005
4AUM
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Crystal structure, recombinant expression and mutagenesis studies of the bifunctional catalase-phenol oxidase from Scytalidium thermophilum
Descriptor: CALCIUM ION, CATALASE-PHENOL OXIDASE, CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE, ...
Authors:Yuzugullu, Y, Trinh, C.H, Smith, M.A, Pearson, A.R, Phillips, S.E.V, Sutay Kocabas, D, Bakir, U, Ogel, Z.B, McPherson, M.J.
Deposit date:2012-05-18
Release date:2013-02-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure, Recombinant Expression and Mutagenesis Studies of the Catalase with Oxidase Activity from Scytalidium Thermophilum
Acta Crystallogr.,Sect.D, 69, 2013
4CIJ
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Structure of Rolling Circle Replication Initiator Protein from Geobacillus stearothermophilus.
Descriptor: GST REP
Authors:Carr, S.B, Phillips, S.E.V, Thomas, C.D.
Deposit date:2013-12-10
Release date:2014-12-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of Replication Initiation Proteins from Staphylococcal Antibiotic Resistance Plasmids Reveal Protein Asymmetry and Flexibility are Necessary for Replication.
Nucleic Acids Res., 44, 2016
1ZSE
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BU of 1zse by Molmil
RNA stemloop from bacteriophage Qbeta complexed with an N87S mutant MS2 Capsid
Descriptor: Coat protein, RNA HAIRPIN
Authors:Horn, W.T, Tars, K, Grahn, E, Helgstrand, C, Baron, A.J, Lago, H, Adams, C.J, Peabody, D.S, Phillips, S.E.V, Stonehouse, N.J, Liljas, L, Stockley, P.G.
Deposit date:2005-05-24
Release date:2006-05-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis of RNA Binding Discrimination between Bacteriophages Qbeta and MS2
Structure, 14, 2006
4AUL
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Crystal structure, recombinant expression and mutagenesis studies of the bifunctional catalase-phenol oxidase from Scytalidium thermophilum
Descriptor: CALCIUM ION, CATALASE-PHENOL OXIDASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Yuzugullu, Y, Trinh, C.H, Smith, M.A, Pearson, A.R, Phillips, S.E.V, Sutay Kocabas, D, Bakir, U, Ogel, Z.B, McPherson, M.J.
Deposit date:2012-05-18
Release date:2013-02-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure, Recombinant Expression and Mutagenesis Studies of the Catalase with Oxidase Activity from Scytalidium Thermophilum
Acta Crystallogr.,Sect.D, 69, 2013
4BWL
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Structure of the Y137A mutant of E. coli N-acetylneuraminic acid lyase in complex with pyruvate, N-acetyl-D-mannosamine and N- acetylneuraminic acid
Descriptor: 2-(ACETYLAMINO)-2-DEOXY-D-MANNOSE, 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-2-ulosonic acid, N-ACETYLNEURAMINATE LYASE, ...
Authors:Campeotto, I, Phillips, S.E.V, Pearson, A.R, Nelson, A, Berry, A.
Deposit date:2013-07-03
Release date:2014-02-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Reaction Mechanism of N-Acetylneuraminic Acid Lyase Revealed by a Combination of Crystallography, Qm/Mm Simulation and Mutagenesis.
Acs Chem.Biol., 9, 2014
5OYM
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HIV Integrase Binding Domain of Lens Epithelium-Derived Growth Factor
Descriptor: PC4 and SFRS1-interacting protein
Authors:Rabbitts, T.H, Phillips, S.E.V, Cruz-Migoni, A, Carr, S.B, Hannon, C.
Deposit date:2017-09-11
Release date:2018-03-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Cloning, purification and structure determination of the HIV integrase-binding domain of lens epithelium-derived growth factor.
Acta Crystallogr F Struct Biol Commun, 74, 2018
5PGM
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SACCHAROMYCES CEREVISIAE PHOSPHOGLYCERATE MUTASE
Descriptor: ALANINE, PHOSPHOGLYCERATE MUTASE 1, SULFATE ION
Authors:Rigden, D.J, Phillips, S.E.V, Fothergill-Gilmore, L.A.
Deposit date:1998-08-19
Release date:1999-02-16
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Sulphate ions observed in the 2.12 A structure of a new crystal form of S. cerevisiae phosphoglycerate mutase provide insights into understanding the catalytic mechanism.
J.Mol.Biol., 286, 1999
1FZR
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CRYSTAL STRUCTURE OF BACTERIOPHAGE T7 ENDONUCLEASE I
Descriptor: ENDONUCLEASE I
Authors:Hadden, J.M, Convery, M.A, Declais, A.C, Lilley, D.M.J, Phillips, S.E.V.
Deposit date:2000-10-04
Release date:2001-01-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the Holliday junction resolving enzyme T7 endonuclease I.
Nat.Struct.Biol., 8, 2001
5OCG
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Discovery of small molecules binding to KRAS via high affinity antibody fragment competition method.
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, GTPase KRas, ...
Authors:Cruz-Migoni, A, Ehebauer, M.T, Phillips, S.E.V, Quevedo, C.E, Rabbitts, T.H.
Deposit date:2017-06-30
Release date:2018-08-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Small molecule inhibitors of RAS-effector protein interactions derived using an intracellular antibody fragment.
Nat Commun, 9, 2018
5OCO
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BU of 5oco by Molmil
Discovery of small molecules binding to KRAS via high affinity antibody fragment competition method.
Descriptor: CITRIC ACID, DI(HYDROXYETHYL)ETHER, GTPase KRas, ...
Authors:Cruz-Migoni, A, Ehebauer, M.T, Phillips, S.E.V, Quevedo, C.E, Rabbitts, T.H.
Deposit date:2017-07-03
Release date:2018-08-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Small molecule inhibitors of RAS-effector protein interactions derived using an intracellular antibody fragment.
Nat Commun, 9, 2018
5OCT
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BU of 5oct by Molmil
Discovery of small molecules binding to KRAS via high affinity antibody fragment competition method.
Descriptor: DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, GTPase KRas, ...
Authors:Cruz-Migoni, A, Ehebauer, M.T, Phillips, S.E.V, Quevedo, C.E, Rabbitts, T.H.
Deposit date:2017-07-03
Release date:2018-08-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Small molecule inhibitors of RAS-effector protein interactions derived using an intracellular antibody fragment.
Nat Commun, 9, 2018
1DMU
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BU of 1dmu by Molmil
Crystal structure of the restriction endonuclease BglI (e.c.3.1.21.4) bound to its dna recognition sequence
Descriptor: BETA-MERCAPTOETHANOL, BGLI RESTRICTION ENDONUCLEASE, CALCIUM ION, ...
Authors:Newman, M, Lunnen, K, Wilson, G, Greci, J, Schildkraut, I, Phillips, S.E.V.
Deposit date:1999-12-15
Release date:1999-12-18
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of restriction endonuclease BglI bound to its interrupted DNA recognition sequence.
EMBO J., 17, 1998
1DYU
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The active site base controls cofactor reactivity in Escherichia coli amine oxidase: X-ray crystallographic studies with mutational variants.
Descriptor: CALCIUM ION, COPPER (II) ION, COPPER AMINE OXIDASE
Authors:Murray, J.M, Wilmot, C.M, Saysell, C.G, Jaeger, J, Knowles, P.F, Phillips, S.E.V, McPherson, M.J.
Deposit date:2000-02-08
Release date:2000-02-29
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:The Active Site Base Controls Cofactor Reactivity in Escherichia Coli Amine Oxidase : X-Ray Crystallographicstudies with Mutational Variants
Biochemistry, 38, 1999

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