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PDB: 134 results

3US2
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Structure of p63 DNA Binding Domain in Complex with a 19 Base Pair A/T Rich Response Element Containing Two Half Sites with a Single Base Pair Overlap
Descriptor: 5'-D(*AP*AP*AP*CP*AP*TP*GP*TP*TP*AP*AP*AP*CP*AP*TP*GP*TP*TP*T)-3', 5'-D(*AP*AP*AP*CP*AP*TP*GP*TP*TP*TP*AP*AP*CP*AP*TP*GP*TP*TP*T)-3', Tumor protein 63, ...
Authors:Chen, C, Herzberg, O.
Deposit date:2011-11-22
Release date:2012-02-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Pliable DNA Conformation of Response Elements Bound to Transcription Factor p63.
J.Biol.Chem., 287, 2012
3US0
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Structure of p63 DNA Binding Domain in Complex with a 22 Base Pair A/T Rich Response Element Containing a Two Base Pair "AT" Spacer Between Half Sites
Descriptor: 5'-D(*AP*AP*AP*CP*AP*TP*GP*TP*TP*TP*AP*TP*AP*AP*AP*CP*AP*TP*GP*TP*TP*T)-3', Tumor protein 63, ZINC ION
Authors:Chen, C, Herzberg, O.
Deposit date:2011-11-22
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Pliable DNA Conformation of Response Elements Bound to Transcription Factor p63.
J.Biol.Chem., 287, 2012
3US1
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Structure of p63 DNA Binding Domain in Complex with a 22 Base Pair Response Element Containing a Two Base Pair "GC" Spacer Between Half Sites
Descriptor: 5'-D(*AP*AP*AP*CP*AP*TP*GP*TP*TP*TP*GP*CP*AP*AP*AP*CP*AP*TP*GP*TP*TP*T)-3', Tumor protein 63, ZINC ION
Authors:Chen, C, Herzberg, O.
Deposit date:2011-11-22
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Pliable DNA Conformation of Response Elements Bound to Transcription Factor p63.
J.Biol.Chem., 287, 2012
1GHM
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BU of 1ghm by Molmil
Structures of the acyl-enzyme complex of the staphylococcus aureus beta-lactamase mutant GLU166ASP:ASN170GLN with degraded cephaloridine
Descriptor: 5-METHYL-2-[2-OXO-1-(2-THIOPHEN-2-YL-ACETYLAMINO)-ETHYL]-3,6-DIHYDRO-2H-[1,3]THIAZINE-4-CARBOXYLIC ACID, BETA-LACTAMASE, CARBONATE ION, ...
Authors:Chen, C.C.H, Herzberg, O.
Deposit date:2000-12-19
Release date:2001-04-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structures of the acyl-enzyme complexes of the Staphylococcus aureus beta-lactamase mutant Glu166Asp:Asn170Gln with benzylpenicillin and cephaloridine.
Biochemistry, 40, 2001
1GHP
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BU of 1ghp by Molmil
STRUCTURES OF THE ACYL-ENZYME COMPLEX OF THE STAPHYLOCOCCUS AUREUS BETA-LACTAMASE MUTANT GLU166ASP:ASN170GLN WITH DEGRADED BENZYLPENICILLIN
Descriptor: BETA-LACTAMASE, OPEN FORM - PENICILLIN G, SULFATE ION
Authors:Chen, C.C.H, Herzberg, O.
Deposit date:2000-12-21
Release date:2001-04-04
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structures of the acyl-enzyme complexes of the Staphylococcus aureus beta-lactamase mutant Glu166Asp:Asn170Gln with benzylpenicillin and cephaloridine.
Biochemistry, 40, 2001
1DJB
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BU of 1djb by Molmil
STRUCTURE OF BETA-LACTAMASE PRECURSOR, S70A MUTANT, AT 298K
Descriptor: BETA-LACTAMASE
Authors:Chen, C.C.H, Herzberg, O.
Deposit date:1996-08-13
Release date:1997-03-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and kinetics of the beta-lactamase mutants S70A and K73H from Staphylococcus aureus PC1.
Biochemistry, 35, 1996
1GHI
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BU of 1ghi by Molmil
STRUCTURE OF BETA-LACTAMASE GLU166ASP:ASN170GLN MUTANT
Descriptor: BETA-LACTAMASE, CARBONATE ION
Authors:Chen, C.C.H, Herzberg, O.
Deposit date:2000-12-18
Release date:2001-04-04
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of the acyl-enzyme complexes of the Staphylococcus aureus beta-lactamase mutant Glu166Asp:Asn170Gln with benzylpenicillin and cephaloridine.
Biochemistry, 40, 2001
1GPR
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BU of 1gpr by Molmil
REFINED CRYSTAL STRUCTURE OF IIA DOMAIN OF THE GLUCOSE PERMEASE OF BACILLUS SUBTILIS AT 1.9 ANGSTROMS RESOLUTION
Descriptor: GLUCOSE PERMEASE
Authors:Liao, D.-I, Herzberg, O.
Deposit date:1991-09-25
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:An atomic model for protein-protein phosphoryl group transfer.
J.Biol.Chem., 267, 1992
1KGF
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BU of 1kgf by Molmil
STRUCTURE OF BETA-LACTAMASE ASN 170 GLN MUTANT
Descriptor: BETA-LACTAMASE
Authors:Chen, C.C.H, Zawadzke, L.E, Herzberg, O.
Deposit date:1996-10-17
Release date:1997-03-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Elimination of the hydrolytic water molecule in a class A beta-lactamase mutant: crystal structure and kinetics.
Biochemistry, 35, 1996
1KGE
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BU of 1kge by Molmil
STRUCTURE OF BETA-LACTAMASE ASN 170 MET MUTANT
Descriptor: BETA-LACTAMASE
Authors:Chen, C.C.H, Zawadzke, L.E, Herzberg, O.
Deposit date:1996-10-17
Release date:1997-04-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Elimination of the hydrolytic water molecule in a class A beta-lactamase mutant: crystal structure and kinetics.
Biochemistry, 35, 1996
3B8I
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BU of 3b8i by Molmil
Crystal Structure of Oxaloacetate Decarboxylase from Pseudomonas Aeruginosa (PA4872) in complex with oxalate and Mg2+.
Descriptor: GLYCEROL, MAGNESIUM ION, OXALATE ION, ...
Authors:Narayanan, B.C, Herzberg, O.
Deposit date:2007-11-01
Release date:2008-01-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and function of PA4872 from Pseudomonas aeruginosa, a novel class of oxaloacetate decarboxylase from the PEP mutase/isocitrate lyase superfamily.
Biochemistry, 47, 2008
5TIB
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BU of 5tib by Molmil
Gasdermin-B C-terminal domain containing the polymorphism residues Arg299:Ser306 fused to maltose binding protein
Descriptor: ACETATE ION, SODIUM ION, Sugar ABC transporter substrate-binding protein,Gasdermin-B, ...
Authors:Chao, K, Herzberg, O.
Deposit date:2016-10-01
Release date:2017-02-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Human Gasdermin-B and disease: Sulfatide Binding, Caspase cleavage, and Structural impact of Asthma- and IBS-Associated Polymorphism
Proc.Natl.Acad.Sci.Usa, 2017
5TJ4
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BU of 5tj4 by Molmil
Gasdermin-B C-terminal domain containing the polymorphism residues Gly299:Pro306 fused to maltose binding protein
Descriptor: SODIUM ION, Sugar ABC transporter substrate-binding protein,Gasdermin-B fusion protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Chao, L.K, Herzberg, O.
Deposit date:2016-10-03
Release date:2017-02-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Gene polymorphism linked to increased asthma and IBD risk alters gasdermin-B structure, a sulfatide and phosphoinositide binding protein.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3GAY
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BU of 3gay by Molmil
Structure of Giardia fructose-1,6-biphosphate aldolase in complex with tagatose-1,6-biphosphate
Descriptor: 1,6-di-O-phosphono-D-tagatose, Fructose-bisphosphate aldolase, ZINC ION
Authors:Galkin, A, Herzberg, O.
Deposit date:2009-02-18
Release date:2009-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into the substrate binding and stereoselectivity of giardia fructose-1,6-bisphosphate aldolase.
Biochemistry, 48, 2009
5TJ2
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BU of 5tj2 by Molmil
Gasdermin-B C-terminal domain containing the polymorphism residues Gly299:Ser306 fused to maltose binding protein
Descriptor: Sugar ABC transporter substrate-binding protein,Gasdermin-B fusion protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Chao, L.K, Herzberg, O.
Deposit date:2016-10-03
Release date:2017-02-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Human Gasdermin-B and disease: Sulfatide Binding, Caspase cleavage, and Structural impact of Asthma- and IBS-Associated Polymorphism
Proc.Natl.Acad.Sci.Usa, 2017
1SPH
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BU of 1sph by Molmil
REFINED STRUCTURES OF THE ACTIVE S83C AND IMPAIRED S46D HPRS: EVIDENCE THAT PHOSPHORYLATION DOES NOT REQUIRE A BACKBONE CONFORMATIONAL TRANSITION
Descriptor: HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN HPR
Authors:Liao, D.-I, Herzberg, O.
Deposit date:1994-11-03
Release date:1995-02-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Refined structures of the active Ser83-->Cys and impaired Ser46-->Asp histidine-containing phosphocarrier proteins.
Structure, 2, 1994
3L2D
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BU of 3l2d by Molmil
Glycocyamine kinase, beta-beta homodimer from marine worm Namalycastis sp.
Descriptor: Glycocyamine kinase beta chain
Authors:Lim, K, Pullalarevu, S, Herzberg, O.
Deposit date:2009-12-15
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the mechanism and substrate specificity of glycocyamine kinase, a phosphagen kinase family member.
Biochemistry, 49, 2010
3L2E
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BU of 3l2e by Molmil
Glycocyamine kinase, alpha-beta heterodimer from marine worm Namalycastis sp.
Descriptor: Glycocyamine kinase alpha chain, Glycocyamine kinase beta chain
Authors:Lim, K, Pullalarevu, S, Herzberg, O.
Deposit date:2009-12-15
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the mechanism and substrate specificity of glycocyamine kinase, a phosphagen kinase family member.
Biochemistry, 49, 2010
3GRF
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BU of 3grf by Molmil
X-ray Structure of Ornithine Transcarbamoylase from Giardia lamblia
Descriptor: NICKEL (II) ION, Ornithine carbamoyltransferase
Authors:Galkin, A, Herzberg, O.
Deposit date:2009-03-25
Release date:2009-06-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structure and kinetic properties of ornithine transcarbamoylase from the human parasite Giardia lamblia.
Proteins, 76, 2009
1OME
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BU of 1ome by Molmil
CRYSTAL STRUCTURE OF THE OMEGA LOOP DELETION MUTANT (RESIDUES 163-178 DELETED) OF BETA-LACTAMASE FROM STAPHYLOCOCCUS AUREUS PC1
Descriptor: BETA-LACTAMASE, CHLORIDE ION
Authors:Banerjee, S, Pieper, U, Herzberg, O.
Deposit date:1998-02-09
Release date:1998-05-27
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Role of the omega-loop in the activity, substrate specificity, and structure of class A beta-lactamase.
Biochemistry, 37, 1998
1KC7
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BU of 1kc7 by Molmil
Pyruvate Phosphate Dikinase with Bound Mg-phosphonopyruvate
Descriptor: MAGNESIUM ION, PHOSPHONOPYRUVATE, SULFATE ION, ...
Authors:Chen, C.C, Howard, A, Herzberg, O.
Deposit date:2001-11-07
Release date:2002-01-30
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Pyruvate site of pyruvate phosphate dikinase: crystal structure of the enzyme-phosphonopyruvate complex, and mutant analysis
Biochemistry, 41, 2002
3FA3
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BU of 3fa3 by Molmil
Crystal structure of 2,3-dimethylmalate lyase, a PEP mutase/isocitrate lyase superfamily member, trigonal crystal form
Descriptor: 2,2-difluoro-3,3-dihydroxybutanedioic acid, 2,3-dimethylmalate lyase, GLYCEROL, ...
Authors:Narayanan, B.C, Herzberg, O.
Deposit date:2008-11-14
Release date:2009-01-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and function of 2,3-dimethylmalate lyase, a PEP mutase/isocitrate lyase superfamily member.
J.Mol.Biol., 386, 2009
3GAK
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BU of 3gak by Molmil
Structure of Giardia fructose-1,6-biphosphate aldolase
Descriptor: Fructose-bisphosphate aldolase, SULFATE ION, ZINC ION
Authors:Galkin, A, Herzberg, O.
Deposit date:2009-02-17
Release date:2009-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural insights into the substrate binding and stereoselectivity of giardia fructose-1,6-bisphosphate aldolase.
Biochemistry, 48, 2009
1KGG
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BU of 1kgg by Molmil
STRUCTURE OF BETA-LACTAMASE GLU166GLN:ASN170ASP MUTANT
Descriptor: PROTEIN (BETA-LACTAMASE), SULFATE ION
Authors:Chen, C.C.H, Herzberg, O.
Deposit date:1999-05-20
Release date:1999-05-28
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Relocation of the catalytic carboxylate group in class A beta-lactamase: the structure and function of the mutant enzyme Glu166-->Gln:Asn170-->Asp.
Protein Eng., 12, 1999
3GB6
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BU of 3gb6 by Molmil
Structure of Giardia fructose-1,6-biphosphate aldolase D83A mutant in complex with fructose-1,6-bisphosphate
Descriptor: 1,6-di-O-phosphono-D-fructose, Fructose-bisphosphate aldolase, ZINC ION
Authors:Galkin, A, Herzberg, O.
Deposit date:2009-02-18
Release date:2009-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into the substrate binding and stereoselectivity of giardia fructose-1,6-bisphosphate aldolase.
Biochemistry, 48, 2009

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