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PDB: 92 results

1NKS
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ADENYLATE KINASE FROM SULFOLOBUS ACIDOCALDARIUS
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ADENYLATE KINASE
Authors:Vonrhein, C, Schulz, G.E.
Deposit date:1998-07-16
Release date:1998-12-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:The structure of a trimeric archaeal adenylate kinase.
J.Mol.Biol., 282, 1998
2MOA
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BU of 2moa by Molmil
Solution NMR structure of peptide ImI1 (peak 2)
Descriptor: Alpha-conotoxin ImI
Authors:Heinis, C, Chen, S.
Deposit date:2014-04-24
Release date:2014-09-24
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Dithiol amino acids can structurally shape and enhance the ligand-binding properties of polypeptides.
Nat Chem, 6, 2014
2BBP
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BU of 2bbp by Molmil
NMR structures of the peptide linked to the genome (VPg) of poliovirus
Descriptor: Genome linked protein VPg
Authors:Schein, C.H, Oezguen, N.
Deposit date:2005-10-17
Release date:2006-03-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of the viral peptide linked to the genome (VPg) of poliovirus.
Peptides, 27, 2006
2BBL
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NMR structures of the peptide linked to the genome (VPg) of poliovirus in a stabilizing solvent
Descriptor: Genome linked protein VPg
Authors:Schein, C.H, Oezguen, N.
Deposit date:2005-10-17
Release date:2006-03-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of the viral peptide linked to the genome (VPg) of poliovirus.
Peptides, 27, 2006
2LIW
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BU of 2liw by Molmil
NMR structure of HMG-ACPI domain from CurA module from Lyngbya majuscula
Descriptor: 3-HYDROXY-3-METHYL-GLUTARIC ACID, 4'-PHOSPHOPANTETHEINE, CurA
Authors:Busche, A.E, Gottstein, D, Hein, C, Ripin, N, Pader, I, Tufar, P, Eisman, E.B, Gu, L, Walsh, C.T, Loehr, F, Sherman, D.H, Guntert, P, Dotsch, V.
Deposit date:2011-09-01
Release date:2011-12-21
Last modified:2012-03-14
Method:SOLUTION NMR
Cite:Characterization of Molecular Interactions between ACP and Halogenase Domains in the Curacin A Polyketide Synthase.
Acs Chem.Biol., 7, 2012
2LIU
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NMR structure of holo-ACPI domain from CurA module from Lyngbya majuscula
Descriptor: CurA
Authors:Busche, A.E, Gottstein, D, Hein, C, Ripin, N, Pader, I, Tufar, P, Eisman, E.B, Gu, L, Walsh, C.T, Loehr, F, Sherman, D.H, Guntert, P, Dotsch, V.
Deposit date:2011-09-01
Release date:2011-12-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Characterization of Molecular Interactions between ACP and Halogenase Domains in the Curacin A Polyketide Synthase.
Acs Chem.Biol., 7, 2012
1W0F
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Crystal structure of human cytochrome P450 3A4
Descriptor: CYTOCHROME P450 3A4, PROGESTERONE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Williams, P.A, Cosme, J, Vinkovic, D.M, Ward, A, Angove, H.C, Day, P.J, Vonrhein, C, Tickle, I.J, Jhoti, H.
Deposit date:2004-06-03
Release date:2004-07-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal Structures of Human Cytochrome P450 3A4 Bound to Metyrapone and Progesterone
Science, 305, 2004
1W0G
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Crystal structure of human cytochrome P450 3A4
Descriptor: CYTOCHROME P450 3A4, METYRAPONE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Williams, P.A, Cosme, J, Vinkovic, D.M, Ward, A, Angove, H.C, Day, P.J, Vonrhein, C, Tickle, I.J, Jhoti, H.
Deposit date:2004-06-03
Release date:2004-07-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Crystal Structures of Human Cytochrome P450 3A4 Bound to Metyrapone and Progesterone
Science, 305, 2004
3CJW
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Crystal structure of the human COUP-TFII ligand binding domain
Descriptor: COUP transcription factor 2
Authors:Kruse, S.W, Reynolds, R, Vonrhein, C, Xu, H.E.
Deposit date:2008-03-14
Release date:2008-10-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Identification of COUP-TFII Orphan Nuclear Receptor as a Retinoic Acid-Activated Receptor.
Plos Biol., 6, 2008
4GLY
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BU of 4gly by Molmil
Human urokinase-type plasminogen activator uPA in complex with the two-disulfide bridge peptide UK504
Descriptor: BICYCLIC PEPTIDE INHIBITOR UK504, CHLORIDE ION, GLYCEROL, ...
Authors:Buth, S.A, Leiman, P.G, Chen, S, Heinis, C.
Deposit date:2012-08-15
Release date:2013-05-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.518 Å)
Cite:Bicyclic Peptide Ligands Pulled out of Cysteine-Rich Peptide Libraries.
J.Am.Chem.Soc., 135, 2013
7QUV
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BU of 7quv by Molmil
Crystal structure of human Calprotectin (S100A8/S100A9) in complex with Peptide 3
Descriptor: 1,2-ETHANEDIOL, 4-methanoyl-2-(6-oxidanyl-3-oxidanylidene-4~{H}-xanthen-9-yl)benzoic acid, AMINO GROUP, ...
Authors:Diaz-Perlas, C, Heinis, C, Pojer, F, Lau, K.
Deposit date:2022-01-19
Release date:2023-02-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:High-affinity peptides developed against calprotectin and their application as synthetic ligands in diagnostic assays.
Nat Commun, 14, 2023
1G29
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MALK
Descriptor: 1,4-DIETHYLENE DIOXIDE, AMMONIUM ION, CHLORIDE ION, ...
Authors:Diederichs, K, Diez, J, Greller, G, Mueller, C, Breed, J, Schnell, C, Vonrhein, C, Boos, W, Welte, W.
Deposit date:2000-10-18
Release date:2000-12-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of MalK, the ATPase subunit of the trehalose/maltose ABC transporter of the archaeon Thermococcus litoralis.
EMBO J., 19, 2000
5D9A
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BU of 5d9a by Molmil
Influenza C Virus RNA-dependent RNA Polymerase - Space group P212121
Descriptor: Polymerase acidic protein, Polymerase basic protein 2, RNA-directed RNA polymerase catalytic subunit
Authors:Hengrung, N, El Omari, K, Serna Martin, I, Vreede, F.T, Cusack, S, Rambo, R.P, Vonrhein, C, Bricogne, G, Stuart, D.I, Grimes, J.M, Fodor, E.
Deposit date:2015-08-18
Release date:2015-10-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (4.3 Å)
Cite:Crystal structure of the RNA-dependent RNA polymerase from influenza C virus.
Nature, 527, 2015
5D98
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Influenza C Virus RNA-dependent RNA Polymerase - Space group P43212
Descriptor: MAGNESIUM ION, Polymerase acidic protein, Polymerase basic protein 2, ...
Authors:Hengrung, N, El Omari, K, Serna Martin, I, Vreede, F.T, Cusack, S, Rambo, R.P, Vonrhein, C, Bricogne, G, Stuart, D.I, Grimes, J.M, Fodor, E.
Deposit date:2015-08-18
Release date:2015-10-21
Last modified:2017-09-13
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Crystal structure of the RNA-dependent RNA polymerase from influenza C virus.
Nature, 527, 2015
2IX0
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BU of 2ix0 by Molmil
RNase II
Descriptor: CALCIUM ION, CYTIDINE-5'-MONOPHOSPHATE, EXORIBONUCLEASE 2, ...
Authors:Frazao, C, Mcvey, C.E, Amblar, M, Barbas, A, Vonrhein, C, Arraiano, C.M, Carrondo, M.A.
Deposit date:2006-07-05
Release date:2006-10-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Unravelling the Dynamics of RNA Degradation by Ribonuclease II and its RNA-Bound Complex
Nature, 7, 2006
3JSB
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Crystal structure of the N-terminal domain of the Lymphocytic Choriomeningitis Virus L protein
Descriptor: RNA-directed RNA polymerase
Authors:Morin, B, Jamal, S, Ferron, F.P, Coutard, B, Bricogne, G, Canard, B, Vonrhein, C, Marseilles Structural Genomics Program @ AFMB (MSGP)
Deposit date:2009-09-10
Release date:2010-09-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:The N-terminal domain of the arenavirus L protein is an RNA endonuclease essential in mRNA transcription
Plos Pathog., 6, 2010
8ASE
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Crystal structure of Thrombin in complex with macrocycle T3
Descriptor: (8~{S},14~{S},18~{E})-8-[(4-chlorophenyl)methyl]-3,21-dithia-7,10,16-triazatricyclo[21.2.2.1^{10,14}]octacosa-1(26),18,23(27),24-tetraene-6,9,15-trione, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Chinellato, M, Angelini, A, Nielsen, A, Heinis, C, Cendron, L.
Deposit date:2022-08-19
Release date:2023-11-29
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of Thrombin in complex with optimized macrocycles T1 and T3
To Be Published
8ASF
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Crystal structure of Thrombin in complex with macrocycle T1
Descriptor: 5-chloranyl-~{N}-[[(9~{S},15~{R})-8,14,17-tris(oxidanylidene)-3,20-dithia-7,13,16-triazatetracyclo[20.2.2.1^{5,7}.1^{9,13}]octacosa-1(25),22(26),23-trien-15-yl]methyl]thiophene-2-carboxamide, Thrombin heavy chain, Thrombin light chain
Authors:Chinellato, M, Angelini, A, Nielsen, A, Heinis, C, Cendron, L.
Deposit date:2022-08-19
Release date:2024-03-06
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Crystal structure of Thrombin in complex with optimized macrocycles T1 and T3
To Be Published
2IX1
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RNase II D209N mutant
Descriptor: 5'-D(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP *AP*AP*A)-3', EXORIBONUCLEASE 2, MAGNESIUM ION
Authors:Frazao, C, McVey, C.E, Amblar, M, Barbas, A, Vonrhein, C, Arraiano, C.M, Carrondo, M.A.
Deposit date:2006-07-05
Release date:2006-10-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Unravelling the Dynamics of RNA Degradation by Ribonuclease II and its RNA-Bound Complex
Nature, 443, 2006
4AWL
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BU of 4awl by Molmil
The NF-Y transcription factor is structurally and functionally a sequence specific histone
Descriptor: HSP70 PROMOTER FRAGMENT, NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT ALPHA, NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT BETA, ...
Authors:Nardini, M, Gnesutta, N, Donati, G, Gatta, R, Forni, C, Fossati, A, Vonrhein, C, Moras, D, Romier, C, Mantovani, R, Bolognesi, M.
Deposit date:2012-06-04
Release date:2013-01-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Sequence-Specific Transcription Factor NF-Y Displays Histone-Like DNA Binding and H2B-Like Ubiquitination.
Cell(Cambridge,Mass.), 152, 2013
1SYQ
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Human vinculin head domain VH1, residues 1-258, in complex with human talin's vinculin binding site 1, residues 607-636
Descriptor: Talin 1, vinculin isoform VCL
Authors:Izard, T, Vonrhein, C.
Deposit date:2004-04-01
Release date:2004-07-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Structural basis for amplifying vinculin activation by talin
J.Biol.Chem., 279, 2004
1MAW
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Crystal Structure of Tryptophanyl-tRNA Synthetase Complexed with ATP in an Open Conformation
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, TRYPTOPHAN-TRNA LIGASE
Authors:Retailleau, P, Huang, X, Yin, Y, Hu, M, Weinreb, V, Vachette, P, Vonrhein, C, Bricogne, G, Roversi, P, Ilyin, V, Carter Jr, C.W.
Deposit date:2002-08-02
Release date:2003-01-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Interconversion of ATP binding and conformational free energies by tryptophanyl-tRNA synthetase: structures of ATP bound to open and closed, pre-transition-state conformations.
J.Mol.Biol., 325, 2003
1W0E
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Crystal structure of human cytochrome P450 3A4
Descriptor: CYTOCHROME P450 3A4, PROTOPORPHYRIN IX CONTAINING FE
Authors:Williams, P.A, Cosme, J, Vinkovic, D.M, Ward, A, Angove, H.C, Day, P.J, Vonrhein, C, Tickle, I.J, Jhoti, H.
Deposit date:2004-06-03
Release date:2004-07-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structures of Human Cytochrome P450 3A4 Bound to Metyrapone and Progesterone
Science, 305, 2004
1MB2
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Crystal Structure of Tryptophanyl-tRNA Synthetase Complexed with Tryptophan in an Open Conformation
Descriptor: TRYPTOPHAN, TRYPTOPHAN-TRNA LIGASE
Authors:Retailleau, P, Huang, X, Yin, Y, Hu, M, Weinreb, V, Vachette, P, Vonrhein, C, Bricogne, G, Roversi, P, Ilyin, V, Carter Jr, C.W.
Deposit date:2002-08-02
Release date:2003-01-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Interconversion of ATP binding and conformational free energies by tryptophanyl-tRNA synthetase: structures of ATP bound to open and closed, pre-transition-state conformations.
J.Mol.Biol., 325, 2003
1J5E
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Structure of the Thermus thermophilus 30S Ribosomal Subunit
Descriptor: 16S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
Authors:Wimberly, B.T, Brodersen, D.E, Clemons Jr, W.M, Morgan-Warren, R, Carter, A.P, Vonrhein, C, Hartsch, T, Ramakrishnan, V.
Deposit date:2002-04-08
Release date:2002-04-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structure of the 30S ribosomal subunit.
Nature, 407, 2000

 

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