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PDB: 24 件

6Q6R
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Recognition of different base tetrads by RHAU: X-ray crystal structure of G4 recognition motif bound to the 3-end tetrad of a DNA G-quadruplex
分子名称: ATP-dependent DNA/RNA helicase DHX36, POTASSIUM ION, Parallel stranded DNA G-quadruplex
著者Heddi, B, Cheong, V.V, Schmitt, E, Mechulam, Y, Phan, A.T.
登録日2018-12-11
公開日2019-10-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Recognition of different base tetrads by RHAU (DHX36): X-ray crystal structure of the G4 recognition motif bound to the 3'-end tetrad of a DNA G-quadruplex.
J.Struct.Biol., 209, 2020
2LD8
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Structure of Human Telomeric DNA in Crowded Solution
分子名称: Human Telomeric DNA
著者Heddi, B, Phan, A.T.
登録日2011-05-17
公開日2011-06-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of Human Telomeric DNA in Crowded Solution
J.Am.Chem.Soc., 2011
2N16
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Solution structure of G-quadruplex recognition domain of RHAU
分子名称: ATP-dependent RNA helicase DHX36
著者Heddi, B, Cheong, V.V, Martadinata, H, Phan, A.T.
登録日2015-03-23
公開日2015-07-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Insights into G-quadruplex specific recognition by the DEAH-box helicase RHAU: Solution structure of a peptide-quadruplex complex.
Proc.Natl.Acad.Sci.USA, 112, 2015
2N60
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G-quadruplexes with (4n-1) guanines in the G-tetrad core: formation of a G-triad water complex and implication for small-molecule binding
分子名称: DNA (5'-D(*TP*TP*GP*TP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3')
著者Heddi, B, Martin-Pintado, N, Serimbetov, Z, Kari, T.M, Phan, A.T.
登録日2015-08-08
公開日2016-06-01
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献G-quadruplexes with (4n - 1) guanines in the G-tetrad core: formation of a G-triadwater complex and implication for small-molecule binding
Nucleic Acids Res., 44, 2016
2N21
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Solution structure of complex between DNA G-quadruplex and G-quadruplex recognition domain of RHAU
分子名称: ATP-dependent RNA helicase DHX36, DNA (5'-D(*TP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3')
著者Heddi, B, Cheong, V.V, Martadinata, H, Phan, A.T.
登録日2015-04-25
公開日2015-07-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Insights into G-quadruplex specific recognition by the DEAH-box helicase RHAU: Solution structure of a peptide-quadruplex complex.
Proc.Natl.Acad.Sci.USA, 112, 2015
8IPP
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BU of 8ipp by Molmil
Crystal structure of the complex between an ankyrin and a parallel G-quadruplex
分子名称: 93del-T12, DARPin protein 2E4, MAGNESIUM ION, ...
著者Ngo, K.H, Liew, C.W, Heddi, B, Phan, A.T.
登録日2023-03-14
公開日2024-07-31
実験手法X-RAY DIFFRACTION (2.007 Å)
主引用文献Structural Basis for Parallel G-Quadruplex Recognition by an Ankyrin Protein.
J.Am.Chem.Soc., 146, 2024
8IPF
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Crystal structure of an ankyrin protein that can specifically recognize a parallel G-quadruplex
分子名称: DARPin (2E4)
著者Ngo, K.H, Liew, C.W, Heddi, B, Phan, A.T.
登録日2023-03-14
公開日2024-07-31
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structural Basis for Parallel G-Quadruplex Recognition by an Ankyrin Protein.
J.Am.Chem.Soc., 146, 2024
6K3Y
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G-quadruplex complex with cyclic dinucleotide 3'-3' cGAMP
分子名称: 2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one, DNA (5'-D(*TP*TP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3')
著者Winnerdy, F.R, Heddi, B, Phan, A.T.
登録日2019-05-22
公開日2020-01-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution Structures of a G-Quadruplex Bound to Linear- and Cyclic-Dinucleotides.
J.Am.Chem.Soc., 141, 2019
6K3X
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G-quadruplex complex with linear dinucleotide d(AG)
分子名称: DNA (5'-D(*AP*G)-3'), DNA (5'-D(*TP*TP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3')
著者Winnerdy, F.R, Heddi, B, Phan, A.T.
登録日2019-05-22
公開日2020-01-15
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution Structures of a G-Quadruplex Bound to Linear- and Cyclic-Dinucleotides.
J.Am.Chem.Soc., 141, 2019
6H1K
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The major G-quadruplex form of HIV-1 LTR
分子名称: DNA (28-MER)
著者Phan, A.T, Heddi, B, Butovskaya, E, Bakalar, B, Richter, S.N.
登録日2018-07-11
公開日2018-10-17
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Major G-Quadruplex Form of HIV-1 LTR Reveals a (3 + 1) Folding Topology Containing a Stem-Loop.
J. Am. Chem. Soc., 140, 2018
6GZ6
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Structure of a left-handed G-quadruplex
分子名称: DNA (27-MER), POTASSIUM ION
著者Bakalar, B, Heddi, B, Schmitt, E, Mechulam, Y, Phan, A.T.
登録日2018-07-03
公開日2019-04-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.006 Å)
主引用文献A Minimal Sequence for Left-Handed G-Quadruplex Formation.
Angew.Chem.Int.Ed.Engl., 58, 2019
6FQ2
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Structure of minimal sequence for left -handed G-quadruplex formation
分子名称: DNA (5'-D(*GP*TP*GP*GP*TP*GP*GP*TP*GP*GP*TP*G)-3'), POTASSIUM ION
著者Schmitt, E, Mechulam, Y, Phan, A.T, Heddi, B, Bakalar, B.
登録日2018-02-13
公開日2018-12-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献A Minimal Sequence for Left-Handed G-Quadruplex Formation.
Angew. Chem. Int. Ed. Engl., 58, 2019
2MB2
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parallel-stranded G-quadruplex in DNA poly-G stretches
分子名称: DNA_(5'-D(*TP*TP*GP*GP*GP*GP*GP*GP*GP*GP*GP*GP*GP*GP*GP*GP*GP*T)-3')
著者Sengar, A, Heddi, B, Phan, A.T.
登録日2013-07-24
公開日2014-12-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Formation of g-quadruplexes in poly-g sequences: structure of a propeller-type parallel-stranded g-quadruplex formed by a g15 stretch.
Biochemistry, 53, 2014
2MAY
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BU of 2may by Molmil
Structure of a G-quadruplex containing a single LNA modification
分子名称: DNA_(5'-D(*TP*TP*GP*LGP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*A)-3')
著者Lech, C, Heddi, B, Adrian, M, Li, Z, Phan, A.T.
登録日2013-07-22
公開日2015-02-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Engineering G4: Towards effective incorporation of locked nucleic acid into G-quadruplexes
To be Published
2MBJ
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Structure of an antiparallel (2+2) G-quadruplex formed by human telomeric repeats in Na+ solution (with G22-to-BrG substitution)
分子名称: DNA_(27-MER)
著者Lim, K.W, Ng, V.C.M, Martin-Pintado, N, Heddi, B, Phan, A.T.
登録日2013-08-02
公開日2013-09-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of the human telomere in Na+ solution: an antiparallel (2+2) G-quadruplex scaffold reveals additional diversity.
Nucleic Acids Res., 41, 2013
2MWZ
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BU of 2mwz by Molmil
Xanthine and 8-oxoguanine in G-quadruplexes: formation of a G G X O tetrad
分子名称: DNA (5'-D(*TP*TP*GP*GP*GP*TP*TP*AP*(8OG)P*GP*GP*TP*TP*AP*GP*GP*(3ZO)P*TP*TP*AP*GP*GP*GP*A)-3')
著者Cheong, V.V, Heddi, B, Lech, C.J, Phan, A.T.
登録日2014-12-04
公開日2015-10-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Xanthine and 8-oxoguanine in G-quadruplexes: formation of a GGXO tetrad.
Nucleic Acids Res., 43, 2015
2N3M
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G-quadruplex structure of an anti-proliferative DNA sequence
分子名称: DNA_(28-MER)
著者Do, N.Q, Chung, W.J, Truong, T.H.A, Heddi, B, Phan, A.T.
登録日2015-06-05
公開日2016-07-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献G-quadruplex structure of an anti-proliferative DNA sequence
To be Published
2LPW
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human CEB25 minisatellite G-quadruplex
分子名称: DNA (26-MER)
著者Amrane, S, Adrian, M, Heddi, B, Serero, A, Nicolas, A, Mergny, J.L, Phan, A.T.
登録日2012-02-20
公開日2012-03-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Formation of Pearl-Necklace Monomorphic G-Quadruplexes in the Human CEB25 Minisatellite.
J.Am.Chem.Soc., 134, 2012
2MS9
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BU of 2ms9 by Molmil
Solution structure of a G-quadruplex
分子名称: DNA (28-MER)
著者Chung, W.J, Heddi, B, Schmitt, E, Lim, K.W, Mechulam, Y, Phan, A.T.
登録日2014-07-25
公開日2015-02-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of a left-handed DNA G-quadruplex
Proc.Natl.Acad.Sci.USA, 2015
2LE6
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Structure of a dimeric all-parallel-stranded G-quadruplex stacked via the 5'-to-5' interface
分子名称: DNA (5'-D(*GP*IP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3')
著者Do, N.Q, Lim, K.W, Teo, M.H, Heddi, B, Phan, A.T.
登録日2011-06-10
公開日2011-08-31
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Stacking of G-quadruplexes: NMR structure of a G-rich oligonucleotide with potential anti-HIV and anticancer activity
Nucleic Acids Res., 2011
2MB3
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Solution structure of an intramolecular (3+1) human telomeric G-quadruplex bound to a telomestatin derivative
分子名称: (12S,27S)-12,27-bis(4-aminobutyl)-4,30-dimethyl-3,7,14,18,22,29-hexaoxa-11,26,31,32,33,34,35,36-octaazaheptacyclo[26.2. 1.1~2,5~.1~6,9~.1~13,16~.1~17,20~.1~21,24~]hexatriaconta-1(30),2(36),4,6(35),8,13(34),15,17(33),19,21(32),23,28(31)-dode caene-10,25-dione, DNA_(5'-D(*TP*TP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*A)-3')
著者Chung, W.J, Heddi, B, Tera, M, Iida, K, Nagasawa, K, Phan, A.T.
登録日2013-07-24
公開日2013-08-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of an intramolecular (3 + 1) human telomeric g-quadruplex bound to a telomestatin derivative.
J.Am.Chem.Soc., 135, 2013
2MB4
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Solution structure of a stacked dimeric G-quadruplex formed by a segment of the human CEB1 minisatellite
分子名称: DNA_(5'-D(*AP*GP*GP*GP*GP*GP*GP*AP*GP*GP*GP*AP*GP*GP*GP*TP*GP*G)-3')
著者Adrian, M, Ang, D.J, Lech, C, Heddi, B, Nicolas, A, Phan, A.T.
登録日2013-07-25
公開日2014-05-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and Conformational Dynamics of a Stacked Dimeric G-Quadruplex Formed by the Human CEB1 Minisatellite.
J.Am.Chem.Soc., 136, 2014
2MGN
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Solution structure of a G-quadruplex bound to the bisquinolinium compound Phen-DC3
分子名称: 5'-D(*TP*GP*AP*GP*GP*GP*TP*GP*GP*TP*GP*AP*GP*GP*GP*TP*GP*GP*GP*GP*AP*AP*GP*G)-3', N2,N9-bis(1-methylquinolin-3-yl)-1,10-phenanthroline-2,9-dicarboxamide
著者Chung, W.J, Heddi, B, Hamon, F, Teulade-Fichou, M.P, Phan, A.T.
登録日2013-11-01
公開日2014-01-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution Structure of a G-quadruplex Bound to the Bisquinolinium Compound Phen-DC3.
Angew.Chem.Int.Ed.Engl., 53, 2014
2N4Y
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Structure and possible function of a G-quadruplex in the long terminal repeat of the proviral HIV-1 genome
分子名称: DNA_(5'-D(*CP*TP*GP*GP*GP*CP*GP*GP*GP*AP*CP*TP*GP*GP*GP*GP*AP*GP*TP*GP*GP*T)-3')
著者DeNicola, B, Lech, C.J, Heddi, B, Regmi, S, Frasson, I, Perrone, R, Richter, S.N, Phan, A.T.
登録日2015-07-02
公開日2016-06-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and possible function of a G-quadruplex in the long terminal repeat of the proviral HIV-1 genome.
Nucleic Acids Res., 44, 2016

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件を2024-10-30に公開中

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