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PDB: 49 件
6LBH
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BU of 6lbh by Molmil
Cryo-EM structure of the MgtE Mg2+ channel under Mg2+-free conditions
分子名称: Fab heavy chain, Fab light chain, Magnesium transporter MgtE
著者Hattori, M, Jin, F.
登録日2019-11-14
公開日2021-04-14
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献The structure of MgtE in the absence of magnesium provides new insights into channel gating.
Plos Biol., 19, 2021
8JV5
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BU of 8jv5 by Molmil
Cryo-EM structure of the zebrafish P2X4 receptor in complex with BX430
分子名称: 1-[2,6-bis(bromanyl)-4-propan-2-yl-phenyl]-3-pyridin-3-yl-urea, 2-acetamido-2-deoxy-beta-D-glucopyranose, P2X purinoceptor
著者Hattori, M, Shen, C.
登録日2023-06-27
公開日2023-10-18
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (3.23 Å)
主引用文献Structural insights into the allosteric inhibition of P2X4 receptors.
Nat Commun, 14, 2023
8JV6
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BU of 8jv6 by Molmil
Cryo-EM structure of the zebrafish P2X4 receptor in complex with BAY-1797
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, N-[4-(3-chloranylphenoxy)-3-sulfamoyl-phenyl]-2-phenyl-ethanamide, P2X purinoceptor
著者Hattori, M, Shen, C.
登録日2023-06-27
公開日2023-10-18
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.43 Å)
主引用文献Structural insights into the allosteric inhibition of P2X4 receptors.
Nat Commun, 14, 2023
4DW0
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BU of 4dw0 by Molmil
Crystal structure of the ATP-gated P2X4 ion channel in the closed, apo state at 2.9 Angstroms
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GADOLINIUM ATOM, GLYCEROL, ...
著者Hattori, M, Gouaux, E.
登録日2012-02-24
公開日2012-04-25
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Molecular mechanism of ATP binding and ion channel activation in P2X receptors.
Nature, 485, 2012
4DW1
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BU of 4dw1 by Molmil
Crystal structure of the ATP-gated P2X4 ion channel in the ATP-bound, open state at 2.8 Angstroms
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
著者Hattori, M, Gouaux, E.
登録日2012-02-24
公開日2012-04-25
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Molecular mechanism of ATP binding and ion channel activation in P2X receptors.
Nature, 485, 2012
6AH5
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BU of 6ah5 by Molmil
Structure of human P2X3 receptor in complex with ATP and Mg2+ ion
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Hattori, M.
登録日2018-08-16
公開日2019-06-12
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.819 Å)
主引用文献Molecular mechanisms of human P2X3 receptor channel activation and modulation by divalent cation bound ATP.
Elife, 8, 2019
6AH4
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Structure of human P2X3 receptor in complex with ATP and Ca2+ ion
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Hattori, M.
登録日2018-08-16
公開日2019-06-12
最終更新日2020-12-23
実験手法X-RAY DIFFRACTION (3.296 Å)
主引用文献Molecular mechanisms of human P2X3 receptor channel activation and modulation by divalent cation bound ATP.
Elife, 8, 2019
3A1U
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BU of 3a1u by Molmil
Crystal structue of the cytosolic domain of T. maritima FeoB iron iransporter in GMPPNP form
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, Iron(II) transport protein B, MAGNESIUM ION, ...
著者Hattori, M, Ishitani, R, Nureki, O.
登録日2009-04-22
公開日2009-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis of novel interactions between the small-GTPase and GDI-like domains in prokaryotic FeoB iron transporter
Structure, 17, 2009
3A1S
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BU of 3a1s by Molmil
Crystal structue of the cytosolic domain of T. maritima FeoB iron iransporter in GDP form I
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, GUANOSINE-5'-DIPHOSPHATE, ...
著者Hattori, M, Ishitani, R, Nureki, O.
登録日2009-04-22
公開日2009-09-22
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis of novel interactions between the small-GTPase and GDI-like domains in prokaryotic FeoB iron transporter
Structure, 17, 2009
3A1W
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Crystal structue of the G domain of T. maritima FeoB iron iransporter
分子名称: Iron(II) transport protein B, SULFATE ION
著者Hattori, M, Ishitani, R, Nureki, O.
登録日2009-04-22
公開日2009-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9001 Å)
主引用文献Structural basis of novel interactions between the small-GTPase and GDI-like domains in prokaryotic FeoB iron transporter
Structure, 17, 2009
3A1T
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BU of 3a1t by Molmil
Crystal structue of the cytosolic domain of T. maritima FeoB iron iransporter in GDP form II
分子名称: GUANOSINE-5'-DIPHOSPHATE, Iron(II) transport protein B
著者Hattori, M, Ishitani, R, Nureki, O.
登録日2009-04-22
公開日2009-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis of novel interactions between the small-GTPase and GDI-like domains in prokaryotic FeoB iron transporter
Structure, 17, 2009
2YVX
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BU of 2yvx by Molmil
Crystal structure of magnesium transporter MgtE
分子名称: MAGNESIUM ION, Mg2+ transporter MgtE
著者Hattori, M, Tanaka, Y, Fukai, S, Ishitani, R, Nureki, O.
登録日2007-04-18
公開日2007-09-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structure of the MgtE Mg(2+) transporter
Nature, 448, 2007
3A1V
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BU of 3a1v by Molmil
Crystal structue of the cytosolic domain of T. maritima FeoB iron iransporter in apo form
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Hattori, M, Ishitani, R, Nureki, O.
登録日2009-04-22
公開日2009-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis of novel interactions between the small-GTPase and GDI-like domains in prokaryotic FeoB iron transporter
Structure, 17, 2009
2YVZ
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BU of 2yvz by Molmil
Crystal structure of magnesium transporter MgtE cytosolic domain, Mg2+-free form
分子名称: Mg2+ transporter MgtE
著者Hattori, M, Tanaka, Y, Fukai, S, Ishitani, R, Nureki, O.
登録日2007-04-18
公開日2007-09-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Crystal structure of the MgtE Mg(2+) transporter
Nature, 448, 2007
2YVY
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BU of 2yvy by Molmil
Crystal structure of magnesium transporter MgtE cytosolic domain, Mg2+ bound form
分子名称: MAGNESIUM ION, Mg2+ transporter MgtE
著者Hattori, M, Tanaka, Y, Fukai, S, Ishitani, R, Nureki, O.
登録日2007-04-18
公開日2007-09-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the MgtE Mg(2+) transporter
Nature, 448, 2007
8JV7
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BU of 8jv7 by Molmil
Cryo-EM structure of the panda P2X7 receptor in complex with PPADS
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-[(E)-[4-methanoyl-6-methyl-5-oxidanyl-3-(phosphonooxymethyl)pyridin-2-yl]diazenyl]benzene-1,3-disulfonic acid, P2X purinoceptor
著者Sheng, D, Hattori, M.
登録日2023-06-27
公開日2023-11-29
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural insights into the orthosteric inhibition of P2X receptors by non-ATP analog antagonists.
Elife, 12, 2024
8JV8
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BU of 8jv8 by Molmil
Cryo-EM structure of the panda P2X7 receptor in complex with PPNDS
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[(E)-{4-formyl-5-hydroxy-6-methyl-3-[(phosphonooxy)methyl]pyridin-2-yl}diazenyl]-7-nitronaphthalene-1,5-disulfonic acid, P2X purinoceptor
著者Sheng, D, Hattori, M.
登録日2023-06-27
公開日2023-11-29
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.34 Å)
主引用文献Structural insights into the orthosteric inhibition of P2X receptors by non-ATP analog antagonists.
Elife, 12, 2024
8YL8
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BU of 8yl8 by Molmil
Crystal structure of the de novo designed protein 200 AA in the crystal form 2
分子名称: De novo protein, SULFATE ION
著者Zhao, Z, Hattori, M.
登録日2024-03-05
公開日2024-10-16
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Efficient and scalable protein design using a relaxed sequence space.
Science, 2024
8YL4
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BU of 8yl4 by Molmil
Crystal structure of the de novo designed protein 200 AA in the crystal form 1
分子名称: De novo protein, GLYCEROL
著者Zhao, Z, Hattori, M.
登録日2024-03-05
公開日2024-10-16
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Efficient and scalable protein design using a relaxed sequence space.
Science, 2024
6LR7
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BU of 6lr7 by Molmil
Crystal structure of GFPuv complexed with the nanobody LaG16 at 1.67 Angstron resolution
分子名称: Green fluorescent protein, Nanobody LaG16
著者Zhang, Z.Y, Ding, Y, Hattori, M.
登録日2020-01-15
公開日2020-04-29
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structure-based engineering of anti-GFP nanobody tandems as ultra-high-affinity reagents for purification.
Sci Rep, 10, 2020
8GPV
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BU of 8gpv by Molmil
Cytoplasmic domain structure of the MgtE Mg2+ channel from Clostridiales bacterium
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MAGNESIUM ION, Magnesium transporter MgtE
著者Wang, M, Zhao, Y, Hattori, M.
登録日2022-08-27
公開日2023-04-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Novel Mg 2+ binding sites in the cytoplasmic domain of the MgtE Mg 2+ channels revealed by X-ray crystal structures.
Acta Biochim.Biophys.Sin., 55, 2023
8GPS
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BU of 8gps by Molmil
Cytoplasmic domain structure of the MgtE Mg2+ channel from Chryseobacterium hispalense
分子名称: MAGNESIUM ION, MgtE
著者Wang, M, Zhao, Y, Hattori, M.
登録日2022-08-27
公開日2023-04-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Novel Mg 2+ binding sites in the cytoplasmic domain of the MgtE Mg 2+ channels revealed by X-ray crystal structures.
Acta Biochim.Biophys.Sin., 55, 2023
4WIB
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BU of 4wib by Molmil
Crystal structure of Magnesium transporter MgtE
分子名称: CALCIUM ION, Magnesium transporter MgtE
著者Takeda, H, Hattori, M, Nishizawa, T, Yamashita, K, Shah, S.T.A, Caffrey, M, Maturana, A.D, Ishitani, R, Nureki, O.
登録日2014-09-25
公開日2014-12-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for ion selectivity revealed by high-resolution crystal structure of Mg(2+) channel MgtE
Nat Commun, 5, 2014
8H5E
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BU of 8h5e by Molmil
Crystal structure of the MgtE TM domain in complex with Ca2+ ions at 2.5 angstrom resolution
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CALCIUM ION, Magnesium transporter MgtE
著者Teng, X, Sheng, D, Hattori, M.
登録日2022-10-13
公開日2022-12-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Ion selectivity mechanism of the MgtE channel for Mg 2+ over Ca 2 .
Iscience, 25, 2022
8H70
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Crystal structure of the catalytic ATP-binding domain of the PhoR sensor histidine kinase from Vibrio cholera
分子名称: DI(HYDROXYETHYL)ETHER, Phosphate regulon sensor protein PhoR
著者Jia, R, Zhao, W, Hattori, M.
登録日2022-10-18
公開日2023-02-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Crystal structure of the catalytic ATP-binding domain of the PhoR sensor histidine kinase.
Proteins, 91, 2023

 

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