Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 626 件

8HD0
DownloadVisualize
BU of 8hd0 by Molmil
Cell divisome sPG hydrolysis machinery FtsEX-EnvC
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cell division ATP-binding protein FtsE, Cell division protein FtsX, ...
著者Zhang, Z, Chen, Y.
登録日2022-11-03
公開日2023-11-08
実験手法ELECTRON MICROSCOPY (3.11 Å)
主引用文献Structural insight into the septal peptidoglycan hydrolysis machinery of bacterial cell division
To Be Published
8WH3
DownloadVisualize
BU of 8wh3 by Molmil
MPOX E5 hexamer apo form
分子名称: Uncoating factor OPG117
著者Zhang, Z, Dong, C.
登録日2023-09-22
公開日2024-09-25
実験手法ELECTRON MICROSCOPY (2.87 Å)
主引用文献Essential and multifunctional mpox virus E5 helicase-primase in double and single hexamer.
Sci Adv, 10, 2024
8WH6
DownloadVisualize
BU of 8wh6 by Molmil
MPOX E5 hexamer ADP and ssDNA bound and clear primase domain conformation
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(P*CP*CP*C)-3'), Uncoating factor OPG117, ...
著者Zhang, Z, Dong, C.
登録日2023-09-22
公開日2024-09-25
実験手法ELECTRON MICROSCOPY (3.27 Å)
主引用文献Essential and multifunctional mpox virus E5 helicase-primase in double and single hexamer.
Sci Adv, 10, 2024
8WH4
DownloadVisualize
BU of 8wh4 by Molmil
MPOX E5 hexamer ssDNA bound apo conformation
分子名称: DNA (5'-D(P*CP*CP*CP*C)-3'), Uncoating factor OPG117
著者Zhang, Z, Dong, C.
登録日2023-09-22
公開日2024-09-25
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献Essential and multifunctional mpox virus E5 helicase-primase in double and single hexamer.
Sci Adv, 10, 2024
7DEU
DownloadVisualize
BU of 7deu by Molmil
Crystal structure of SARS-CoV-2 RBD in complex with a neutralizing antibody scFv
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, antibody scFv
著者Zhang, Z, Zhang, G, Li, X, Rao, Z, Guo, Y.
登録日2020-11-05
公開日2021-03-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for SARS-CoV-2 neutralizing antibodies with novel binding epitopes.
Plos Biol., 19, 2021
4N3Y
DownloadVisualize
BU of 4n3y by Molmil
Crystal structure of Rabex-5CC and Rabaptin-5C21 complex
分子名称: Rab GTPase-binding effector protein 1, Rab5 GDP/GTP exchange factor
著者Zhang, Z, Zhang, T, Ding, J.
登録日2013-10-08
公開日2014-07-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Molecular mechanism for Rabex-5 GEF activation by Rabaptin-5
Elife, 3, 2014
8UVK
DownloadVisualize
BU of 8uvk by Molmil
CosR DNA bound form II
分子名称: DI(HYDROXYETHYL)ETHER, DNA (5'-D(*AP*AP*TP*TP*AP*AP*GP*AP*TP*AP*TP*TP*AP*TP*TP*AP*AP*CP*CP*AP*A)-3'), DNA (5'-D(*TP*TP*GP*GP*TP*TP*AP*AP*TP*AP*AP*TP*AP*TP*CP*TP*TP*AP*AP*TP*T)-3'), ...
著者Zhang, Z.
登録日2023-11-03
公開日2024-01-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structural basis of DNA recognition of the Campylobacter jejuni CosR regulator.
Mbio, 15, 2024
8UUZ
DownloadVisualize
BU of 8uuz by Molmil
Campylobacter jejuni CosR apo form
分子名称: DNA-binding response regulator
著者Zhang, Z.
登録日2023-11-02
公開日2024-01-31
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (3.77 Å)
主引用文献Structural basis of DNA recognition of the Campylobacter jejuni CosR regulator.
Mbio, 15, 2024
8UVX
DownloadVisualize
BU of 8uvx by Molmil
CosR DNA bound form I
分子名称: DNA (5'-D(*AP*TP*AP*TP*CP*TP*TP*AP*AP*TP*TP*TP*TP*GP*GP*TP*TP*AP*AP*TP*A)-3'), DNA (5'-D(*TP*AP*TP*TP*AP*AP*CP*CP*AP*AP*AP*AP*TP*TP*AP*AP*GP*AP*TP*AP*T)-3'), DNA-binding response regulator
著者Zhang, Z.
登録日2023-11-05
公開日2024-01-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis of DNA recognition of the Campylobacter jejuni CosR regulator.
Mbio, 15, 2024
3OBZ
DownloadVisualize
BU of 3obz by Molmil
Crystal structure of human phytanoyl-COA dioxygenase phyhd1 2-oxoglutarate and iron complex
分子名称: 2-OXOGLUTARIC ACID, FE (II) ION, Phytanoyl-CoA dioxygenase domain-containing protein 1
著者Zhang, Z, McDonough, M.A, Schofield, C.J.
登録日2010-08-09
公開日2010-09-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal Structure of Human PHYHD1, a Non-Heme Fe(II) and 2-Oxoglutarate Dependent Oxygenase Related to Phytanoyl-CoA Hydroxylase
To be Published
8I96
DownloadVisualize
BU of 8i96 by Molmil
Cryo-EM structure of TLR7/TH-407b complex
分子名称: (1S,3R)-5-[4-(8-nitroquinolin-5-yl)piperazin-1-yl]carbonyladamantan-2-one, Toll-like receptor 7
著者Zhang, Z.
登録日2023-02-06
公開日2024-08-14
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structure of TLR7/TH-407b complex
To Be Published
3OTT
DownloadVisualize
BU of 3ott by Molmil
Crystal Structure of the extracellular domain of the putative one component system BT4673 from B. thetaiotaomicron
分子名称: HEXATANTALUM DODECABROMIDE, Two-component system sensor histidine kinase
著者Zhang, Z, Liu, Q, Hendrickson, W.A.
登録日2010-09-13
公開日2011-08-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of apparent saccharide sensors from histidine kinase receptors prevalent in a human gut symbiont.
Febs J., 281, 2014
4N3Z
DownloadVisualize
BU of 4n3z by Molmil
Crystal structure of Rabex-5delta and Rabaptin-5C21 complex
分子名称: PHOSPHATE ION, Rab GTPase-binding effector protein 1, Rab5 GDP/GTP exchange factor
著者Zhang, Z, Zhang, T, Ding, J.
登録日2013-10-08
公開日2014-07-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Molecular mechanism for Rabex-5 GEF activation by Rabaptin-5
Elife, 3, 2014
4N3X
DownloadVisualize
BU of 4n3x by Molmil
Crystal structure of Rabex-5 CC domain
分子名称: Rab5 GDP/GTP exchange factor
著者Zhang, Z, Zhang, T, Ding, J.
登録日2013-10-08
公開日2014-07-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular mechanism for Rabex-5 GEF activation by Rabaptin-5
Elife, 3, 2014
2JX0
DownloadVisualize
BU of 2jx0 by Molmil
The paxillin-binding domain (PBD) of G Protein Coupled Receptor (GPCR)-kinase (GRK) interacting protein 1 (GIT1)
分子名称: ARF GTPase-activating protein GIT1
著者Zhang, Z, Guibao, C.D, Simmerman, J.A, Zheng, J.
登録日2007-11-01
公開日2008-04-29
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献GIT1 paxillin-binding domain is a four-helix bundle, and it binds to both paxillin LD2 and LD4 motifs.
J.Biol.Chem., 283, 2008
3ZN3
DownloadVisualize
BU of 3zn3 by Molmil
N-terminal domain of S. pombe Cdc23 APC subunit
分子名称: ANAPHASE-PROMOTING COMPLEX SUBUNIT 8, MERCURY (II) ION
著者Zhang, Z, Yang, J, Conin, N, Kulkarni, K, Barford, D.
登録日2013-02-13
公開日2013-02-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Four Canonical Tpr Subunits of Human Apc/C Form Related Homo-Dimeric Structures and Stack in Parallel to Form a Tpr Suprahelix
J.Mol.Biol., 425, 2013
4Q9U
DownloadVisualize
BU of 4q9u by Molmil
Crystal structure of the Rab5, Rabex-5delta and Rabaptin-5C21 complex
分子名称: Rab GTPase-binding effector protein 1, Rab5 GDP/GTP exchange factor, Ras-related protein Rab-5A
著者Zhang, Z, Zhang, T, Ding, J.
登録日2014-05-01
公開日2014-07-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (4.618 Å)
主引用文献Molecular mechanism for Rabex-5 GEF activation by Rabaptin-5
Elife, 3, 2014
5Y28
DownloadVisualize
BU of 5y28 by Molmil
Crystal structure of H. pylori HtrA with PDZ2 deletion
分子名称: 1,2-ETHANEDIOL, Periplasmic serine endoprotease DegP-like, UNK-UNK-UNK-UNK
著者Zhang, Z, Huang, Q, Tao, X.
登録日2017-07-24
公開日2018-08-15
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.08606815 Å)
主引用文献The unique trimeric assembly of the virulence factor HtrA fromHelicobacter pylorioccurs via N-terminal domain swapping.
J.Biol.Chem., 294, 2019
5Y2D
DownloadVisualize
BU of 5y2d by Molmil
Crystal structure of H. pylori HtrA
分子名称: Periplasmic serine endoprotease DegP-like, UNK-UNK-K-UNK-UNK-UNK-UNK-UNK-UNK-UNK, UNK-UNK-UNK, ...
著者Zhang, Z, Huang, Q, Tao, X.
登録日2017-07-25
公開日2018-08-15
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.70009851 Å)
主引用文献The unique trimeric assembly of the virulence factor HtrA fromHelicobacter pylorioccurs via N-terminal domain swapping.
J.Biol.Chem., 294, 2019
5YI8
DownloadVisualize
BU of 5yi8 by Molmil
Crystal structure of drosophila Numb PTB domain and Pon peptide complex
分子名称: FORMIC ACID, Pon peptide from Partner of numb, Protein numb
著者Shan, Z, Wen, W.
登録日2017-10-03
公開日2018-04-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Basal condensation of Numb and Pon complex via phase transition during Drosophila neuroblast asymmetric division.
Nat Commun, 9, 2018
7E3J
DownloadVisualize
BU of 7e3j by Molmil
Crystal structure of SARS-CoV-2 RBD binding to dog ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACE2, Spike protein S1, ...
著者Zhang, Z, Zhang, Y.
登録日2021-02-08
公開日2021-04-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献The molecular basis for SARS-CoV-2 binding to dog ACE2.
Nat Commun, 12, 2021
5YI7
DownloadVisualize
BU of 5yi7 by Molmil
Crystal structure of drosophila Numb PTB domain and Pon peptide complex
分子名称: GLYCEROL, Pon peptide from Partner of numb, Protein numb
著者Shan, Z, Wen, W.
登録日2017-10-03
公開日2018-04-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Basal condensation of Numb and Pon complex via phase transition during Drosophila neuroblast asymmetric division.
Nat Commun, 9, 2018
6JIO
DownloadVisualize
BU of 6jio by Molmil
Human LXR-beta in complex with a ligand
分子名称: Oxysterols receptor LXR-beta, tert-butyl 7-amino-3,4-dihydroisoquinoline-2(1H)-carboxylate
著者Zhang, Z, Zhou, H.
登録日2019-02-22
公開日2019-10-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Identify liver X receptor beta modulator building blocks by developing a fluorescence polarization-based competition assay.
Eur.J.Med.Chem., 178, 2019
6K9H
DownloadVisualize
BU of 6k9h by Molmil
Human LXR-beta in complex with an agonist
分子名称: Oxysterols receptor LXR-beta, ~{tert}-butyl (2'~{S},3~{S})-2-oxidanylidene-2'-phenyl-spiro[1~{H}-indole-3,3'-pyrrolidine]-1'-carboxylate
著者Zhang, Z, Zhou, H.
登録日2019-06-15
公開日2020-04-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Discovery of new LXR beta agonists as glioblastoma inhibitors.
Eur.J.Med.Chem., 194, 2020
6K10
DownloadVisualize
BU of 6k10 by Molmil
Non substrate bound state of Staphylococcus Aureus AldH
分子名称: 1,2-ETHANEDIOL, Aldehyde dehydrogenase
著者Zhang, Z, Tao, X.
登録日2019-05-08
公開日2020-05-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.78962183 Å)
主引用文献Structural Insight into the Substrate Gating Mechanism by Staphylococcus aureus Aldehyde Dehydrogenase
CCS Chemistry, 2, 2020

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon