Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1353 件

7XY4
DownloadVisualize
BU of 7xy4 by Molmil
Cryo-EM structure of SARS-CoV-2 spike in complex with VHH21
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, VHH21
著者Cao, D, Fan, X, Zhang, X.
登録日2022-05-31
公開日2023-09-13
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Identification of nano-abzymes to catalyze the spike-trimer of SARS-CoV-2
To Be Published
7XY3
DownloadVisualize
BU of 7xy3 by Molmil
Cryo-EM structure of SARS-CoV-2 spike in complex with VHH14
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, VHH14
著者Cao, D, Fan, X, Zhang, X.
登録日2022-05-31
公開日2023-09-13
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Identification of nano-abzymes to catalyze the spike-trimer of SARS-CoV-2
To Be Published
190D
DownloadVisualize
BU of 190d by Molmil
Crystal structure of a four-stranded intercalated DNA: d(C4)
分子名称: DNA (5'-D(*CP*CP*CP*C)-3')
著者Chen, L, Cai, L, Zhang, X, Rich, A.
登録日1994-09-02
公開日1995-02-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of a four-stranded intercalated DNA: d(C4).
Biochemistry, 33, 1994
7VQ1
DownloadVisualize
BU of 7vq1 by Molmil
Structure of Apo-hsTRPM2 channel
分子名称: Transient receptor potential cation channel subfamily M member 2
著者Yu, X.F, Xie, Y, Zhang, X.K, Ma, C, Guo, J.T, Yang, F, Yang, W.
登録日2021-10-18
公開日2021-12-22
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.76 Å)
主引用文献Structural and functional basis of the selectivity filter as a gate in human TRPM2 channel.
Cell Rep, 37, 2021
7VQ2
DownloadVisualize
BU of 7vq2 by Molmil
Structure of Apo-hsTRPM2 channel TM domain
分子名称: Transient receptor potential cation channel subfamily M member 2
著者Yu, X.F, Xie, Y, Zhang, X.K, Ma, C, Guo, J.T, Yang, F, Yang, W.
登録日2021-10-18
公開日2021-12-22
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.68 Å)
主引用文献Structural and functional basis of the selectivity filter as a gate in human TRPM2 channel.
Cell Rep, 37, 2021
8KGF
DownloadVisualize
BU of 8kgf by Molmil
Structure of AmCas12a with crRNA
分子名称: CRISPR-associated endonuclease Cas12a, MAGNESIUM ION, RNA (44-MER)
著者Feng, Y, Zhang, X, Shi, J, Ma, P, Tang, J, Huang, X.
登録日2023-08-18
公開日2024-09-04
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献A novel CRISPR/Cas12a in complex with a crRNA.
To Be Published
8HIF
DownloadVisualize
BU of 8hif by Molmil
One asymmetric unit of Singapore grouper iridovirus capsid
分子名称: Major capsid protein, Penton protein (VP14), VP137, ...
著者Zhao, Z.N, Liu, C.C, Zhu, D.J, Qi, J.X, Zhang, X.Z, Gao, G.F.
登録日2022-11-20
公開日2023-04-19
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Near-atomic architecture of Singapore grouper iridovirus and implications for giant virus assembly.
Nat Commun, 14, 2023
5CG8
DownloadVisualize
BU of 5cg8 by Molmil
NgTET1 in complex with 5hmC DNA
分子名称: 2-OXOGLUTARIC ACID, DNA (5'-D(*AP*GP*AP*AP*TP*TP*CP*CP*GP*TP*TP*CP*CP*A)-3'), DNA (5'-D(*TP*GP*GP*AP*AP*(5HC)P*GP*GP*AP*AP*TP*TP*CP*T)-3'), ...
著者Hashimoto, H, Pais, J.E, Dai, N, Zhang, X, Zheng, Y, Cheng, X.
登録日2015-07-09
公開日2015-09-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.702 Å)
主引用文献Structure of Naegleria Tet-like dioxygenase (NgTet1) in complexes with a reaction intermediate 5-hydroxymethylcytosine DNA.
Nucleic Acids Res., 43, 2015
4TOR
DownloadVisualize
BU of 4tor by Molmil
Crystal structure of Tankyrase 1 with IWR-8
分子名称: 1-[(1-acetyl-5-bromo-1H-indol-6-yl)sulfonyl]-N-ethyl-N-(3-methylphenyl)piperidine-4-carboxamide, CHLORIDE ION, Tankyrase-1, ...
著者Chen, H, Zhang, X, Lum, L, Chen, C.
登録日2014-06-06
公開日2015-05-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献Disruption of Wnt/ beta-Catenin Signaling and Telomeric Shortening Are Inextricable Consequences of Tankyrase Inhibition in Human Cells.
Mol.Cell.Biol., 35, 2015
2DI4
DownloadVisualize
BU of 2di4 by Molmil
Crystal structure of the FtsH protease domain
分子名称: Cell division protein ftsH homolog, MERCURY (II) ION
著者Suno, R, Niwa, H, Tsuchiya, D, Zhang, X, Yoshida, M, Morikawa, K.
登録日2006-03-28
公開日2006-06-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structure of the Whole Cytosolic Region of ATP-Dependent Protease FtsH
Mol.Cell, 22, 2006
2XRO
DownloadVisualize
BU of 2xro by Molmil
Crystal structure of TtgV in complex with its DNA operator
分子名称: HTH-TYPE TRANSCRIPTIONAL REGULATOR TTGV, OSMIUM ION, TTGV OPERATOR DNA
著者Lu, D, Fillet, S, Meng, C, Alguel, Y, Kloppsteck, P, Bergeron, J, Krell, T, Gallegos, M.-T, Ramos, J, Zhang, X.
登録日2010-09-17
公開日2010-12-01
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Crystal Structure of Ttgv in Complex with its DNA Operator Reveals a General Model for Cooperative DNA Binding of Tetrameric Gene Regulators.
Genes Dev., 24, 2010
1A9M
DownloadVisualize
BU of 1a9m by Molmil
G48H MUTANT OF HIV-1 PROTEASE IN COMPLEX WITH A PEPTIDIC INHIBITOR U-89360E
分子名称: HIV-1 PROTEASE, N-[[1-[N-ACETAMIDYL]-[1-CYCLOHEXYLMETHYL-2-HYDROXY-4-ISOPROPYL]-BUT-4-YL]-CARBONYL]-GLUTAMINYL-ARGINYL-AMIDE
著者Hong, L, Zhang, X.-J, Foundling, S, Hartsuck, J.A, Tang, J.
登録日1998-04-08
公開日1998-06-17
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of a G48H mutant of HIV-1 protease explains how glycine-48 replacements produce mutants resistant to inhibitor drugs.
FEBS Lett., 420, 1997
8V8K
DownloadVisualize
BU of 8v8k by Molmil
Crystal Structure of Nanobody NbE
分子名称: Nanobody NbE
著者Koehl, A, Manglik, A, Yu, J, Kumar, A, Zhang, X, Martin, C, Raia, P, Steyaert, J, Ballet, S, Boland, A, Stoeber, M.
登録日2023-12-05
公開日2024-09-11
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural basis of mu-opioid receptor targeting by a nanobody antagonist.
Nat Commun, 15, 2024
3QD7
DownloadVisualize
BU of 3qd7 by Molmil
Crystal structure of YdaL, a stand-alone small MutS-related protein from Escherichia coli
分子名称: Uncharacterized protein ydaL
著者Gui, W.J, Qu, Q.H, Chen, Y.Y, Wang, M, Zhang, X.E, Bi, L.J, Jiang, T.
登録日2011-01-18
公開日2011-06-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of YdaL, a stand-alone small MutS-related protein from Escherichia coli.
J.Struct.Biol., 174, 2011
3VT1
DownloadVisualize
BU of 3vt1 by Molmil
Crystal structure of Ct1,3Gal43A in complex with galactose
分子名称: Ricin B lectin, beta-D-galactopyranose
著者Jiang, D, Fan, J, Wang, X, Zhao, Y, Huang, B, Zhang, X.C.
登録日2012-05-18
公開日2012-12-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.187 Å)
主引用文献Crystal structure of 1,3Gal43A, an exo-beta-1,3-galactanase from Clostridium thermocellum
J.Struct.Biol., 180, 2012
6K5K
DownloadVisualize
BU of 6k5k by Molmil
Structural and catalytic analysis of two diverse uridine phosphorylases in the oomycete Phytophthora capsici.
分子名称: 2'-DEOXYURIDINE, PHOSPHATE ION, Uridine phosphorylase
著者Yang, C.C, Zhang, X.G.
登録日2019-05-29
公開日2019-06-12
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.097 Å)
主引用文献Structural and catalytic analysis of two diverse uridine phosphorylases in Phytophthora capsici.
Sci Rep, 10, 2020
6D2Q
DownloadVisualize
BU of 6d2q by Molmil
Crystal structure of the FERM domain of zebrafish FARP1
分子名称: FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
著者Kuo, Y.C, Zhang, X.
登録日2018-04-13
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Structural analyses of FERM domain-mediated membrane localization of FARP1.
Sci Rep, 8, 2018
6D21
DownloadVisualize
BU of 6d21 by Molmil
Crystal structure of the FERM domain of zebrafish FARP2
分子名称: FERM, RhoGEF and pleckstrin domain protein 2
著者Kuo, Y.C, Zhang, X.
登録日2018-04-12
公開日2018-07-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Structural analyses of FERM domain-mediated membrane localization of FARP1.
Sci Rep, 8, 2018
1TU3
DownloadVisualize
BU of 1tu3 by Molmil
Crystal Structure of Rab5 complex with Rabaptin5 C-terminal Domain
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Rab GTPase binding effector protein 1, ...
著者Zhu, G, Zhai, P, Liu, J, Terzyan, S, Li, G, Zhang, X.C.
登録日2004-06-24
公開日2004-10-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structural basis of Rab5-Rabaptin5 interaction in endocytosis
Nat.Struct.Mol.Biol., 11, 2004
8W8K
DownloadVisualize
BU of 8w8k by Molmil
Crystal structures of HSP90 and the compound Ganetespid in the "closed" conformation
分子名称: 5-[2,4-dihydroxy-5-(propan-2-yl)phenyl]-4-(1-methyl-1H-indol-5-yl)-2,4-dihydro-3H-1,2,4-triazol-3-one, Heat shock protein HSP 90-alpha, MAGNESIUM ION
著者Xu, C, Zhang, X.L, Bai, F.
登録日2023-09-03
公開日2024-04-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Accurate Characterization of Binding Kinetics and Allosteric Mechanisms for the HSP90 Chaperone Inhibitors Using AI-Augmented Integrative Biophysical Studies.
Jacs Au, 4, 2024
8W4V
DownloadVisualize
BU of 8w4v by Molmil
Crystal structure of human HSP90 in complex with compound 4
分子名称: 4-[2-[(dimethylamino)methyl]phenyl]sulfanylbenzene-1,3-diol, Heat shock protein HSP 90-alpha, MAGNESIUM ION
著者Xu, C, Zhang, X.L, Bai, F.
登録日2023-08-25
公開日2024-04-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Accurate Characterization of Binding Kinetics and Allosteric Mechanisms for the HSP90 Chaperone Inhibitors Using AI-Augmented Integrative Biophysical Studies.
Jacs Au, 4, 2024
7W6K
DownloadVisualize
BU of 7w6k by Molmil
Cryo-EM structure of GmALMT12/QUAC1 anion channel
分子名称: GmALMT12/QUAC1
著者Qin, L, Tang, L.H, Xu, J.S, Zhang, X.H, Zhu, Y, Sun, F, Su, M, Zhai, Y.J, Chen, Y.H.
登録日2021-12-01
公開日2022-03-16
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structure and electrophysiological characterization of ALMT from Glycine max reveal a previously uncharacterized class of anion channels.
Sci Adv, 8, 2022
3EA1
DownloadVisualize
BU of 3ea1 by Molmil
Crystal Structure of the Y247S/Y251S Mutant of Phosphatidylinositol-Specific Phospholipase C from Bacillus Thuringiensis
分子名称: 1-phosphatidylinositol phosphodiesterase, ZINC ION
著者Shi, X, Shao, C, Zhang, X, Zambonelli, C, Redfied, A.G, Head, J.F, Seaton, B.A, Roberts, M.F.
登録日2008-08-24
公開日2009-04-14
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Modulation of bacillus thuringiensis phosphatidylinositol-specific phospholipase C activity by mutations in the putative dimerization interface.
J.Biol.Chem., 284, 2009
1AWP
DownloadVisualize
BU of 1awp by Molmil
RAT OUTER MITOCHONDRIAL MEMBRANE CYTOCHROME B5
分子名称: CYTOCHROME B5, PROTOPORPHYRIN IX CONTAINING FE
著者Wang, X, Zhang, X.
登録日1997-10-03
公開日1998-10-28
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The reduction potential of cytochrome b5 is modulated by its exposed heme edge.
Biochemistry, 37, 1998
8IHP
DownloadVisualize
BU of 8ihp by Molmil
Structure of Semliki Forest virus VLP in complex with the receptor VLDLR-LA3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Capsid protein, ...
著者Cao, D, Ma, B, Cao, Z, Zhang, X, Xiang, Y.
登録日2023-02-23
公開日2023-04-12
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure of Semliki Forest virus in complex with its receptor VLDLR.
Cell, 186, 2023

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon