Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1320 件

2UXP
DownloadVisualize
BU of 2uxp by Molmil
TtgR in complex Chloramphenicol
分子名称: CHLORAMPHENICOL, HTH-TYPE TRANSCRIPTIONAL REGULATOR TTGR
著者Alguel, Y, Meng, C, Teran, W, Krell, T, Ramos, J.L, Gallegos, M.-T, Zhang, X.
登録日2007-03-29
公開日2007-05-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structures of Multidrug Binding Protein Ttgr in Complex with Antibiotics and Plant Antimicrobials.
J.Mol.Biol., 369, 2007
2UXH
DownloadVisualize
BU of 2uxh by Molmil
TtgR in complex with Quercetin
分子名称: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, HTH-TYPE TRANSCRIPTIONAL REGULATOR TTGR
著者Alguel, Y, Meng, C, Teran, W, Krell, T, Ramos, J.L, Gallegos, M.-T, Zhang, X.
登録日2007-03-28
公開日2007-05-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structures of Multidrug Binding Protein Ttgr in Complex with Antibiotics and Plant Antimicrobials.
J.Mol.Biol., 369, 2007
3MHH
DownloadVisualize
BU of 3mhh by Molmil
Structure of the SAGA Ubp8/Sgf11/Sus1/Sgf73 DUB module
分子名称: Protein SUS1, SAGA-associated factor 11, SAGA-associated factor 73, ...
著者Samara, N.L, Datta, A.B, Berndsen, C.E, Zhang, X, Yao, T, Cohen, R.E, Wolberger, C.
登録日2010-04-08
公開日2010-04-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural insights into the assembly and function of the SAGA deubiquitinating module.
Science, 328, 2010
2VII
DownloadVisualize
BU of 2vii by Molmil
PspF1-275-Mg-AMP
分子名称: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, PSP OPERON TRANSCRIPTIONAL ACTIVATOR
著者Joly, N, Rappas, M, Buck, M, Zhang, X.
登録日2007-12-04
公開日2008-01-22
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Trapping of a Transcription Complex Using a New Nucleotide Analogue: AMP Aluminium Fluoride
J.Mol.Biol., 375, 2008
8KC7
DownloadVisualize
BU of 8kc7 by Molmil
Rpd3S histone deacetylase complex
分子名称: Chromatin modification-related protein EAF3, Histone deacetylase RPD3, Transcriptional regulatory protein RCO1, ...
著者Dong, S, Li, H, Wang, M, Rasheed, N, Zou, B, Gao, X, Guan, J, Li, W, Zhang, J, Wang, C, Zhou, N, Shi, X, Li, M, Zhou, M, Huang, J, Li, H, Zhang, Y, Wong, K.H, Zhang, X, Chao, W.C.H, He, J.
登録日2023-08-06
公開日2023-09-13
最終更新日2023-10-18
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Structural basis of nucleosome deacetylation and DNA linker tightening by Rpd3S histone deacetylase complex.
Cell Res., 33, 2023
3JA7
DownloadVisualize
BU of 3ja7 by Molmil
Cryo-EM structure of the bacteriophage T4 portal protein assembly at near-atomic resolution
分子名称: Portal protein gp20
著者Sun, L, Zhang, X, Gao, S, Rao, P.A, Padilla-Sanchez, V, Chen, Z, Sun, S, Xiang, Y, Subramaniam, S, Rao, V.B, Rossmann, M.G.
登録日2015-04-21
公開日2015-07-22
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM structure of the bacteriophage T4 portal protein assembly at near-atomic resolution.
Nat Commun, 6, 2015
2DI4
DownloadVisualize
BU of 2di4 by Molmil
Crystal structure of the FtsH protease domain
分子名称: Cell division protein ftsH homolog, MERCURY (II) ION
著者Suno, R, Niwa, H, Tsuchiya, D, Zhang, X, Yoshida, M, Morikawa, K.
登録日2006-03-28
公開日2006-06-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structure of the Whole Cytosolic Region of ATP-Dependent Protease FtsH
Mol.Cell, 22, 2006
2W5R
DownloadVisualize
BU of 2w5r by Molmil
Structure-based mechanism of lipoteichoic acid synthesis by Staphylococcus aureus LtaS.
分子名称: (2R)-2,3-dihydroxypropyl phosphate, ACETATE ION, MANGANESE (II) ION, ...
著者Lu, D, Wormann, M.E, Zhang, X, Schneewind, O, Grundling, A, Freemont, P.S.
登録日2008-12-11
公開日2009-02-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure-Based Mechanism of Lipoteichoic Acid Synthesis by Staphylococcus Aureus Ltas.
Proc.Natl.Acad.Sci.USA, 106, 2009
3JB5
DownloadVisualize
BU of 3jb5 by Molmil
Capsid Structure of the Propionibacterium acnes Bacteriophage ATCC_Clear
分子名称: major capsid protein
著者Chiou, J, Zhang, X, Marinelli, L.J, Modlin, R.L, Zhou, Z.H.
登録日2015-07-23
公開日2016-07-27
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Capsid Structure of the Propionibacterium acnes Bacteriophage ATCC_Clear
To be Published
5ODD
DownloadVisualize
BU of 5odd by Molmil
HUMAN MED26 N-TERMINAL DOMAIN (1-92)
分子名称: Mediator of RNA polymerase II transcription subunit 26
著者Lens, Z, Cantrelle, F.-X, Perruzini, R, Dewitte, F, Hanoulle, X, Villeret, V, Verger, A, Landrieu, I.
登録日2017-07-05
公開日2017-11-29
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献1H, 15N and 13C assignments of the N-terminal domain of the Mediator complex subunit MED26.
Biomol.Nmr Assign., 10, 2016
5IHW
DownloadVisualize
BU of 5ihw by Molmil
The crystal structure of SdrE from staphylococcus aureus
分子名称: Serine-aspartate repeat-containing protein E
著者Zhang, S, Wei, J, Wu, S, Zhang, X, Luo, M, Wang, D.
登録日2016-02-29
公開日2017-03-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The crystal structure of SdrE from staphylococcus aureus
To Be Published
8II0
DownloadVisualize
BU of 8ii0 by Molmil
FACTOR INHIBITING HIF-1 ALPHA in complex with (5-(3-(3-chlorophenyl)isoxazol-5-yl)-3-hydroxypicolinoyl)glycine
分子名称: 2-[[5-[3-(3-chlorophenyl)-1,2-oxazol-5-yl]-3-oxidanyl-pyridin-2-yl]carbonylamino]ethanoic acid, GLYCEROL, Hypoxia-inducible factor 1-alpha inhibitor, ...
著者Nakashima, Y, Corner, T, Zhang, X, Schofield, C.J.
登録日2023-02-24
公開日2024-02-28
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献A Small-Molecule Inhibitor of Factor Inhibiting HIF Binding to a Tyrosine-flip Pocket for the Treatment of Obesity.
Angew.Chem.Int.Ed.Engl., 2024
8IHZ
DownloadVisualize
BU of 8ihz by Molmil
FACTOR INHIBITING HIF-1 ALPHA in complex with (5-(1-(3-(4-chlorophenyl)propyl)-1H-1,2,3-triazol-4-yl)-3-hydroxypicolinoyl)glycine
分子名称: 2-[[5-[1-[3-(4-chlorophenyl)propyl]-1,2,3-triazol-4-yl]-3-oxidanyl-pyridin-2-yl]carbonylamino]ethanoic acid, Hypoxia-inducible factor 1-alpha inhibitor, SULFATE ION, ...
著者Nakashima, Y, Corner, T, Zhang, X, Schofield, C.J.
登録日2023-02-24
公開日2024-02-28
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献A Small-Molecule Inhibitor of Factor Inhibiting HIF Binding to a Tyrosine-flip Pocket for the Treatment of Obesity.
Angew.Chem.Int.Ed.Engl., 2024
1R2Q
DownloadVisualize
BU of 1r2q by Molmil
Crystal Structure of Human Rab5a GTPase Domain at 1.05 A resolution
分子名称: GLYCEROL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Terzyan, S, Zhu, G, Li, G, Zhang, X.C.
登録日2003-09-29
公開日2003-12-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Refinement of the structure of human Rab5a GTPase domain at 1.05 A resolution.
Acta Crystallogr.,Sect.D, 60, 2004
5ABH
DownloadVisualize
BU of 5abh by Molmil
Structure of GH84 with ligand
分子名称: 1,2-ETHANEDIOL, 2-[(2R,3S,4R,5R)-5-(hydroxymethyl)-3,4-bis(oxidanyl)-1-pentyl-pyrrolidin-2-yl]-N-methyl-ethanamide, CALCIUM ION, ...
著者Bergeron-Brlek, M, Goodwin-Tindall, J, Cekic, N, Varghese, V, Zandberg, W.F, Shan, X, Roth, C, Chan, S, Davies, G.J, Vocadlo, D.J, Britton, R.
登録日2015-08-05
公開日2015-11-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献A Convenient Approach to Stereoisomeric Iminocyclitols: Generation of Potent Brain-Permeable Oga Inhibitors.
Angew.Chem.Int.Ed.Engl., 54, 2015
2W5S
DownloadVisualize
BU of 2w5s by Molmil
Structure-based mechanism of lipoteichoic acid synthesis by Staphylococcus aureus LtaS.
分子名称: (2R)-2,3-dihydroxypropyl phosphate, ACETATE ION, MANGANESE (II) ION, ...
著者Lu, D, Wormann, M.E, Zhang, X, Schneewind, O, Grundling, A, Freemont, P.S.
登録日2008-12-11
公開日2009-02-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-Based Mechanism of Lipoteichoic Acid Synthesis by Staphylococcus Aureus Ltas.
Proc.Natl.Acad.Sci.USA, 106, 2009
5ABG
DownloadVisualize
BU of 5abg by Molmil
Structure of GH84 with ligand
分子名称: 1,2-ETHANEDIOL, 2-[(2R,3S,4R,5R)-1-[3-(4-fluorophenyl)propyl]-5-(hydroxymethyl)-3,4-bis(oxidanyl)pyrrolidin-2-yl]-N-methyl-ethanamide, CALCIUM ION, ...
著者Bergeron-Brlek, M, Goodwin-Tindall, J, Cekic, N, Varghese, V, Zandberg, W.F, Shan, X, Roth, C, Chan, S, Davies, G.J, Vocadlo, D.J, Britton, R.
登録日2015-08-05
公開日2015-11-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A Convenient Approach to Stereoisomeric Iminocyclitols: Generation of Potent Brain-Permeable Oga Inhibitors.
Angew.Chem.Int.Ed.Engl., 54, 2015
5IAY
DownloadVisualize
BU of 5iay by Molmil
NMR structure of UHRF1 Tandem Tudor Domains in a complex with Spacer peptide
分子名称: E3 ubiquitin-protein ligase UHRF1, Spacer
著者Fang, J, Cheng, J, Wang, J, Zhang, Q, Liu, M, Gong, R, Wang, P, Zhang, X, Feng, Y, Lan, W, Gong, Z, Tang, C, Wong, J, Yang, H, Cao, C, Xu, Y.
登録日2016-02-22
公開日2016-04-20
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Hemi-methylated DNA opens a closed conformation of UHRF1 to facilitate its histone recognition
Nat Commun, 7, 2016
2W5T
DownloadVisualize
BU of 2w5t by Molmil
Structure-based mechanism of lipoteichoic acid synthesis by Staphylococcus aureus LtaS.
分子名称: (2R)-2,3-dihydroxypropyl phosphate, ACETATE ION, MANGANESE (II) ION, ...
著者Lu, D, Wormann, M.E, Zhang, X, Schneewind, O, Grundling, A, Freemont, P.S.
登録日2008-12-11
公開日2009-02-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-Based Mechanism of Lipoteichoic Acid Synthesis by Staphylococcus Aureus Ltas.
Proc.Natl.Acad.Sci.USA, 106, 2009
2UXU
DownloadVisualize
BU of 2uxu by Molmil
TtgR in complex with Naringenin
分子名称: HTH-TYPE TRANSCRIPTIONAL REGULATOR TTGR, NARINGENIN
著者Alguel, Y, Meng, C, Teran, W, Krell, T, Ramos, J.L, Gallegos, M.-T, Zhang, X.
登録日2007-03-29
公開日2007-05-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structures of Multidrug Binding Protein Ttgr in Complex with Antibiotics and Plant Antimicrobials.
J.Mol.Biol., 369, 2007
2UXO
DownloadVisualize
BU of 2uxo by Molmil
TtgR in complex with Tetracycline
分子名称: HTH-TYPE TRANSCRIPTIONAL REGULATOR TTGR, TETRACYCLINE
著者Alguel, Y, Meng, C, Teran, W, Krell, T, Ramos, J.L, Gallegos, M.-T, Zhang, X.
登録日2007-03-28
公開日2007-05-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structures of Multidrug Binding Protein Ttgr in Complex with Antibiotics and Plant Antimicrobials.
J.Mol.Biol., 369, 2007
1TU3
DownloadVisualize
BU of 1tu3 by Molmil
Crystal Structure of Rab5 complex with Rabaptin5 C-terminal Domain
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Rab GTPase binding effector protein 1, ...
著者Zhu, G, Zhai, P, Liu, J, Terzyan, S, Li, G, Zhang, X.C.
登録日2004-06-24
公開日2004-10-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structural basis of Rab5-Rabaptin5 interaction in endocytosis
Nat.Struct.Mol.Biol., 11, 2004
2UXI
DownloadVisualize
BU of 2uxi by Molmil
Phloretin in complex with TtgR
分子名称: 3-(4-HYDROXYPHENYL)-1-(2,4,6-TRIHYDROXYPHENYL)PROPAN-1-ONE, HTH-TYPE TRANSCRIPTIONAL REGULATOR TTGR
著者Alguel, Y, Meng, C, Teran, W, Krell, T, Ramos, J.L, Gallegos, M.-T, Zhang, X.
登録日2007-03-28
公開日2007-05-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structures of Multidrug Binding Protein Ttgr in Complex with Antibiotics and Plant Antimicrobials.
J.Mol.Biol., 369, 2007
7YD1
DownloadVisualize
BU of 7yd1 by Molmil
Local refinement of SARS-CoV-2 Omicron S trimer complexed with XG005
分子名称: Spike protein S1, XG005-VH, XG005-VL
著者Zhan, W.Q, Zhang, X, Chen, Z.G, Sun, L.
登録日2022-07-02
公開日2023-07-12
実験手法ELECTRON MICROSCOPY (2.99 Å)
主引用文献OS-XG005
To be Published
3MUS
DownloadVisualize
BU of 3mus by Molmil
2A Resolution Structure of Rat Type B Cytochrome b5
分子名称: Cytochrome b5 type B, PROTOPORPHYRIN IX CONTAINING FE
著者Terzyan, S, Zhang, X, Benson, D.R.
登録日2010-05-03
公開日2011-04-13
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Accommodating a Non-Conservative Internal Mutation by Water-Mediated Hydrogen-Bonding Between beta-Sheet Strands: A Comparison of Human and Rat Type B (Mitochondrial) Cytochrome b5
Biochemistry, 50, 2011

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon