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PDB: 8 results

7L07
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BU of 7l07 by Molmil
Last common ancestor of HMPPK and PLK/HMPPK vitamin kinases
Descriptor: ALUMINUM FLUORIDE, Ancestral Protein AncC
Authors:Gonzalez-Ordenes, F, Maturana, P, Herrera-Morande, A, Araya, G, Arizabalos, S, Castro-Fernandez, V.
Deposit date:2020-12-11
Release date:2021-02-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure and molecular dynamics simulations of a promiscuous ancestor reveal residues and an epistatic interaction involved in substrate binding and catalysis in the ATP-dependent vitamin kinase family members.
Protein Sci., 30, 2021
6C8Z
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BU of 6c8z by Molmil
Last common ancestor of ADP-dependent phosphofructokinases from Methanosarcinales
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADP-dependent phosphofructokinase, MAGNESIUM ION, ...
Authors:Castro-Fernandez, V, Gonzalez-Ordenes, F, Munoz, S, Fuentes, N, Leonardo, D, Fuentealba, M, Herrera-Morande, A, Maturana, P, Villalobos, P, Garratt, R.
Deposit date:2018-01-25
Release date:2018-02-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:ADP-Dependent Kinases From the Archaeal OrderMethanosarcinalesAdapt to Salt by a Non-canonical Evolutionarily Conserved Strategy.
Front Microbiol, 9, 2018
7R8Z
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BU of 7r8z by Molmil
Ancestral protein AncEn of Phosphomethylpyrimidine kinases family
Descriptor: BETA-MERCAPTOETHANOL, D(-)-TARTARIC ACID, Phosphomethylpyrimidine Kinase
Authors:Munoz, S, Fuentes-Ugarte, N, Maturana, P, Gonzalez-Ordenes, F, Cea, P, Castro-Fernandez, V.
Deposit date:2021-06-27
Release date:2022-06-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Ancestral protein AncEn of Phosphomethylpyrimidine Kinases family
To Be Published
7R8Y
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BU of 7r8y by Molmil
Ancestral protein AncThEn of Phosphomethylpyrimidine kinases family
Descriptor: 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE, Phosphomethylpyrimidine Kinase
Authors:Munoz, S, Maturana, P, Gonzalez-Ordenes, F, Cea, P, Castro-Fernandez, V.
Deposit date:2021-06-27
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Ancestral protein AncThEn of Phosphomethylpyrimidine Kinases family
To Be Published
6XIO
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BU of 6xio by Molmil
ADP-dependent kinase complex with fructose-6-phosphate and ADPbetaS
Descriptor: 5'-O-[(R)-HYDROXY(THIOPHOSPHONOOXY)PHOSPHORYL]ADENOSINE, 6-O-phosphono-beta-D-fructofuranose, ADP-dependent phosphofructokinase, ...
Authors:Munoz, S, Gonzalez-Ordenes, F, Fuentes, N, Maturana, P, Herrera-Morande, A, Villalobos, P, Castro-Fernandez, V.
Deposit date:2020-06-20
Release date:2021-01-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:Structure of an ancestral ADP-dependent kinase with fructose-6P reveals key residues for binding, catalysis, and ligand-induced conformational changes.
J.Biol.Chem., 296, 2020
6XAT
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BU of 6xat by Molmil
Crystal structure of the human FoxP4 DNA binding Domain
Descriptor: FOXP4 protein, SODIUM ION
Authors:VIllalobos, P, Castro-Fernandez, V, Medina, E, Gonzalez-Ordenes, F, Maturana, P, Herrera-Morande, A, Ramirez-Sarmiento, C.A, Babul, J.
Deposit date:2020-06-04
Release date:2021-06-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Unraveling the folding and dimerization properties of the human FoxP subfamily of transcription factors.
Febs Lett., 597, 2023
7LOL
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BU of 7lol by Molmil
The structure of Agmatinase from E. Coli at 1.8 A displaying urea and agmatine
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, AGMATINE, Agmatinase, ...
Authors:Maturana, P, Figueroa, M, Gonzalez-Ordenes, F, Villalobos, P, Martinez-Oyanedel, J, Uribe, E.A, Castro-Fernandez, V.
Deposit date:2021-02-10
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Escherichia coli Agmatinase: Catalytic Mechanism and Residues Relevant for Substrate Specificity.
Int J Mol Sci, 22, 2021
7LOX
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BU of 7lox by Molmil
The structure of Agmatinase from E. Coli at 3.2 A displaying guanidine in the active site
Descriptor: Agmatinase, GUANIDINE, MANGANESE (II) ION
Authors:Maturana, P, Figueroa, M, Gonzalez-Ordenes, F, Villalobos, P, Martinez-Oyanedel, J, Uribe, E.A, Castro-Fernandez, V.
Deposit date:2021-02-11
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal Structure of Escherichia coli Agmatinase: Catalytic Mechanism and Residues Relevant for Substrate Specificity.
Int J Mol Sci, 22, 2021

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