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PDB: 142 results

1SOR
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BU of 1sor by Molmil
Aquaporin-0 membrane junctions reveal the structure of a closed water pore
Descriptor: Aquaporin-0
Authors:Gonen, T, Sliz, P, Kistler, J, Cheng, Y, Walz, T.
Deposit date:2004-03-15
Release date:2004-05-11
Last modified:2023-08-23
Method:ELECTRON CRYSTALLOGRAPHY (3 Å)
Cite:Aquaporin-0 membrane junctions reveal the structure of a closed water pore
Nature, 429, 2004
2B6P
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BU of 2b6p by Molmil
X-ray structure of lens Aquaporin-0 (AQP0) (lens MIP) in an open pore state
Descriptor: Lens fiber major intrinsic protein
Authors:Gonen, T, Cheng, Y, Sliz, P, Hiroaki, Y, Fujiyoshi, Y, Harrison, S.C, Walz, T.
Deposit date:2005-10-03
Release date:2005-12-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Lipid-protein interactions in double-layered two-dimensional AQP0 crystals.
Nature, 438, 2005
2B6O
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BU of 2b6o by Molmil
Electron crystallographic structure of lens Aquaporin-0 (AQP0) (lens MIP) at 1.9A resolution, in a closed pore state
Descriptor: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Lens fiber major intrinsic protein
Authors:Gonen, T, Cheng, Y, Sliz, P, Hiroaki, Y, Fujiyoshi, Y, Harrison, S.C, Walz, T.
Deposit date:2005-10-03
Release date:2005-12-06
Last modified:2023-08-23
Method:ELECTRON CRYSTALLOGRAPHY (1.9 Å)
Cite:Lipid-protein interactions in double-layered two-dimensional AQP0 crystals.
Nature, 438, 2005
6M9I
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BU of 6m9i by Molmil
L-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712
Descriptor: Ice nucleation protein
Authors:Zee, C, Glynn, C, Gallagher-Jones, M, Miao, J, Santiago, C.G, Cascio, D, Gonen, T, Sawaya, M.R, Rodriguez, J.A.
Deposit date:2018-08-23
Release date:2019-03-27
Last modified:2024-03-13
Method:ELECTRON CRYSTALLOGRAPHY (0.9 Å)
Cite:Homochiral and racemic MicroED structures of a peptide repeat from the ice-nucleation protein InaZ.
IUCrJ, 6, 2019
7SKW
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BU of 7skw by Molmil
Ab initio structure of triclinic lysozyme from electron-counted MicroED data
Descriptor: Lysozyme C, NITRATE ION
Authors:Martynowycz, M.W, Clabbers, M.T.B, Hattne, J, Gonen, T.
Deposit date:2021-10-21
Release date:2022-06-08
Last modified:2022-06-22
Method:ELECTRON CRYSTALLOGRAPHY (0.87 Å)
Cite:Ab initio phasing macromolecular structures using electron-counted MicroED data.
Nat.Methods, 19, 2022
7SKX
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BU of 7skx by Molmil
Ab initio structure of proteinase K from electron-counted MicroED data
Descriptor: 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, CALCIUM ION, Proteinase K
Authors:Martynowycz, M.W, Clabbers, M.T.B, Hattne, J, Gonen, T.
Deposit date:2021-10-21
Release date:2022-06-08
Last modified:2022-06-22
Method:ELECTRON CRYSTALLOGRAPHY (1.5 Å)
Cite:Ab initio phasing macromolecular structures using electron-counted MicroED data.
Nat.Methods, 19, 2022
8FYO
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BU of 8fyo by Molmil
MicroED structure of Proteinase K from lamellae milled from multiple plasma sources
Descriptor: CALCIUM ION, NITRATE ION, Proteinase K
Authors:Martynowycz, M.W, Shiriaeva, A, Clabbers, M.T.B, Nicolas, W.J, Weaver, S.J, Hattne, J, Gonen, T.
Deposit date:2023-01-26
Release date:2023-05-24
Method:ELECTRON CRYSTALLOGRAPHY (1.39 Å)
Cite:A robust approach for MicroED sample preparation of lipidic cubic phase embedded membrane protein crystals.
Nat Commun, 14, 2023
4ZNN
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BU of 4znn by Molmil
MicroED structure of the segment, GVVHGVTTVA, from the A53T familial mutant of Parkinson's disease protein, alpha-synuclein residues 47-56
Descriptor: Alpha-synuclein
Authors:Rodriguez, J.A, Ivanova, M, Sawaya, M.R, Cascio, D, Reyes, F, Shi, D, Johnson, L, Guenther, E, Sangwan, S, Hattne, J, Nannenga, B, Brewster, A.S, Messerschmidt, M, Boutet, S, Sauter, N.K, Gonen, T, Eisenberg, D.S.
Deposit date:2015-05-05
Release date:2015-09-09
Last modified:2024-03-06
Method:ELECTRON CRYSTALLOGRAPHY (1.41 Å)
Cite:Structure of the toxic core of alpha-synuclein from invisible crystals.
Nature, 525, 2015
5A3E
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BU of 5a3e by Molmil
2.5A structure of lysozyme determined by MicroED with data from a single crystal
Descriptor: LYSOZYME C
Authors:Nannenga, B.L, Shi, D, Leslie, A.G.W, Gonen, T.
Deposit date:2015-05-28
Release date:2015-06-17
Last modified:2024-01-10
Method:ELECTRON CRYSTALLOGRAPHY (2.501 Å)
Cite:High-Resolution Structure Determination by Continuous-Rotation Data Collection in Microed.
Nat.Methods, 11, 2014
5I9S
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BU of 5i9s by Molmil
MicroED structure of proteinase K at 1.75 A resolution
Descriptor: Proteinase K, SULFATE ION
Authors:Hattne, J, Shi, D, de la Cruz, M.J, Reyes, F.E, Gonen, T.
Deposit date:2016-02-20
Release date:2016-06-08
Last modified:2023-08-30
Method:ELECTRON CRYSTALLOGRAPHY (1.75 Å)
Cite:Modeling truncated pixel values of faint reflections in MicroED images.
J.Appl.Crystallogr., 49, 2016
6EEX
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BU of 6eex by Molmil
L-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712
Descriptor: L-GSTSTA from ice nucleaction protein, inaZ
Authors:Zee, C, Glynn, C, Gallagher-Jones, M, Miao, J, Santiago, C.G, Cascio, D, Gonen, T, Sawaya, M.R, Rodriguez, J.A.
Deposit date:2018-08-15
Release date:2019-04-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Homochiral and racemic MicroED structures of a peptide repeat from the ice-nucleation protein InaZ.
IUCrJ, 6, 2019
4UOT
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BU of 4uot by Molmil
Thermodynamic hyperstability in parametrically designed helical bundles
Descriptor: DESIGNED HELICAL BUNDLE 5H2L
Authors:Oberdorfer, G, Huang, P, Pei, X.Y, Xu, C, Gonen, T, Nannenga, B, DiMaio, D, Rogers, J, Luisi, B.F, Baker, D.
Deposit date:2014-06-09
Release date:2014-11-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:High Thermodynamic Stability of Parametrically Designed Helical Bundles
Science, 346, 2014
4UOS
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BU of 4uos by Molmil
Thermodynamic hyperstability in parametrically designed helical bundles
Descriptor: DESIGNED HELICAL BUNDLE
Authors:Oberdorfer, G, Huang, P, Pei, X.Y, Xu, C, Gonen, T, Nannenga, B, DiMaio, D, Rogers, J, Luisi, B.F, Baker, D.
Deposit date:2014-06-09
Release date:2014-11-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:High Thermodynamic Stability of Parametrically Designed Helical Bundles
Science, 346, 2014
8VD7
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BU of 8vd7 by Molmil
MicroED structure of SARS-CoV-2 main protease (MPro/3CLPro) with missing cone eliminated by suspended drop
Descriptor: 3C-like proteinase nsp5, CHLORIDE ION
Authors:Bu, G, Gillman, C, Danelius, E, Hattne, J, Nannenga, B.L, Gonen, T.
Deposit date:2023-12-14
Release date:2024-07-17
Method:ELECTRON CRYSTALLOGRAPHY (2.15 Å)
Cite:Eliminating the missing cone challenge through innovative approaches.
J Struct Biol X, 9, 2024
7RM5
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BU of 7rm5 by Molmil
MicroED structure of the human adenosine receptor at 2.8A
Descriptor: 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, Adenosine receptor A2a/Soluble cytochrome b562 chimera, CHOLESTEROL, ...
Authors:Martynowycz, M.W, Shiriaeva, A, Ge, X, Hattne, J, Nannenga, B.L, Cherezov, V, Gonen, T.
Deposit date:2021-07-26
Release date:2021-09-08
Last modified:2023-10-18
Method:ELECTRON CRYSTALLOGRAPHY (2.79 Å)
Cite:MicroED structure of the human adenosine receptor determined from a single nanocrystal in LCP.
Proc.Natl.Acad.Sci.USA, 118, 2021
8SDK
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BU of 8sdk by Molmil
The MicroED structure of proteinase K crystallized by suspended drop crystallization
Descriptor: CALCIUM ION, Proteinase K, SULFATE ION
Authors:Gillman, C, Nicolas, W.J, Martynowycz, M.W, Gonen, T.
Deposit date:2023-04-06
Release date:2023-05-31
Last modified:2023-07-12
Method:ELECTRON CRYSTALLOGRAPHY (2.1 Å)
Cite:Design and implementation of suspended drop crystallization.
Iucrj, 10, 2023
6U5G
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BU of 6u5g by Molmil
MicroED structure of a FIB-milled CypA Crystal
Descriptor: Peptidyl-prolyl cis-trans isomerase A
Authors:Wolff, A.M, Martynowycz, M.W, Zhao, W, Gonen, T, Fraser, J.S, Thompson, M.C.
Deposit date:2019-08-27
Release date:2020-01-29
Last modified:2023-10-11
Method:ELECTRON CRYSTALLOGRAPHY (2.5 Å)
Cite:Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
Iucrj, 7, 2020
4RIL
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BU of 4ril by Molmil
Structure of the amyloid forming segment, GAVVTGVTAVA, from the NAC domain of Parkinson's disease protein alpha-synuclein, residues 68-78, determined by electron diffraction
Descriptor: Alpha-synuclein
Authors:Rodriguez, J.A, Ivanova, M, Sawaya, M.R, Cascio, D, Reyes, F, Shi, D, Johnson, L, Guenther, E, Sangwan, S, Hattne, J, Nannenga, B, Brewster, A.S, Messerschmidt, M, Boutet, S, Sauter, N.K, Gonen, T, Eisenberg, D.S.
Deposit date:2014-10-06
Release date:2015-08-26
Last modified:2023-09-20
Method:ELECTRON CRYSTALLOGRAPHY (1.43 Å)
Cite:Structure of the toxic core of alpha-synuclein from invisible crystals.
Nature, 525, 2015
4JRE
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BU of 4jre by Molmil
Crystal structure of nitrate/nitrite exchanger NarK with nitrite bound
Descriptor: Immunoglobulin Gamma-2a, Heavy chain, Immunoglobulin Kappa, ...
Authors:Zheng, H, Wisedchaisri, G, Gonen, T.
Deposit date:2013-03-21
Release date:2013-05-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a nitrate/nitrite exchanger.
Nature, 497, 2013
4JR9
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BU of 4jr9 by Molmil
Crystal structure of nitrate/nitrite exchanger NarK
Descriptor: Immunoglobulin Gamma-2a, Heavy chain, Immunoglobulin Kappa, ...
Authors:Zheng, H, Wisedchaisri, G, Gonen, T.
Deposit date:2013-03-21
Release date:2013-05-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a nitrate/nitrite exchanger.
Nature, 497, 2013
7KGV
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BU of 7kgv by Molmil
Crystal structure of sodium-coupled neutral amino acid transporter SLC38A9 in the N-terminal plugged form
Descriptor: Monoclonal antibody Fab heavy chain, Monoclonal antibody Fab light chain, Sodium-coupled neutral amino acid transporter 9
Authors:Lei, H, Mu, X, Hattne, J, Gonen, T.
Deposit date:2020-10-19
Release date:2020-12-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:A conformational change in the N terminus of SLC38A9 signals mTORC1 activation.
Structure, 29, 2021
4QIQ
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BU of 4qiq by Molmil
Crystal structure of D-xylose-proton symporter
Descriptor: D-xylose-proton symporter, ZINC ION
Authors:Wisedchaisri, G, Park, M, Iadanza, M.G, Zheng, H, Gonen, T.
Deposit date:2014-06-01
Release date:2014-08-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.51 Å)
Cite:Proton-coupled sugar transport in the prototypical major facilitator superfamily protein XylE.
Nat Commun, 5, 2014
4TQL
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BU of 4tql by Molmil
Computationally designed three helix bundle
Descriptor: Three helix bundle
Authors:Nannenga, B.L, Oberdorfer, G, DiMaio, F, Baker, D, Gonen, T.
Deposit date:2014-06-11
Release date:2014-10-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:High thermodynamic stability of parametrically designed helical bundles.
Science, 346, 2014
6MXF
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BU of 6mxf by Molmil
MicroED structure of thiostrepton at 1.9 A resolution
Descriptor: Thiostrepton
Authors:Jones, C.G, Martynowycz, M.W, Hattne, J, Fulton, T, Stoltz, B.M, Rodriguez, J.A, Nelson, H.M, Gonen, T.
Deposit date:2018-10-30
Release date:2018-11-21
Last modified:2023-11-15
Method:ELECTRON CRYSTALLOGRAPHY (1.91 Å)
Cite:The CryoEM Method MicroED as a Powerful Tool for Small Molecule Structure Determination.
ACS Cent Sci, 4, 2018
6C9I
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BU of 6c9i by Molmil
Single-Particle reconstruction of DARP14 - A designed protein scaffold displaying ~17kDa DARPin proteins - Scaffold
Descriptor: DARP14 - Subunit A with DARPin, DARP14 - Subunit B
Authors:Gonen, S, Liu, Y, Yeates, T.O, Gonen, T.
Deposit date:2018-01-26
Release date:2018-03-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Near-atomic cryo-EM imaging of a small protein displayed on a designed scaffolding system.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018

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