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PDB: 64 results

4UD4
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Structural Plasticity of Cid1 Provides a Basis for its RNA Terminal Uridylyl Transferase Activity
Descriptor: GLYCEROL, POLY(A) RNA POLYMERASE PROTEIN CID1
Authors:Yates, L.A, Durrant, B.P, Fleurdepine, S, Harlos, K, Norbury, C.J, Gilbert, R.J.C.
Deposit date:2014-12-07
Release date:2015-03-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural plasticity of Cid1 provides a basis for its distributive RNA terminal uridylyl transferase activity.
Nucleic Acids Res., 43, 2015
1YJD
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BU of 1yjd by Molmil
Crystal structure of human CD28 in complex with the Fab fragment of a mitogenic antibody (5.11A1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab fragment of 5.11A1 antibody heavy chain, Fab fragment of 5.11A1 antibody light chain, ...
Authors:Evans, E.J, Esnouf, R.M, Manso-Sancho, R, Gilbert, R.J.C, James, J.R, Sorensen, P, Stuart, D.I, Davis, S.J.
Deposit date:2005-01-14
Release date:2005-02-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of a soluble CD28-Fab complex
Nat.Immunol., 6, 2005
6SB1
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BU of 6sb1 by Molmil
Crystal structure of murine perforin-2 P2 domain crystal form 1
Descriptor: CHLORIDE ION, GLYCEROL, Macrophage-expressed gene 1 protein
Authors:Ni, T, Ginger, L, Gilbert, R.J.C.
Deposit date:2019-07-18
Release date:2020-02-05
Last modified:2020-02-26
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure and mechanism of bactericidal mammalian perforin-2, an ancient agent of innate immunity.
Sci Adv, 6, 2020
6SB3
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BU of 6sb3 by Molmil
CryoEM structure of murine perforin-2 ectodomain in a pre-pore form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Macrophage-expressed gene 1 protein
Authors:Ni, T, Yu, X, Gilbert, R.J.C.
Deposit date:2019-07-18
Release date:2020-02-05
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and mechanism of bactericidal mammalian perforin-2, an ancient agent of innate immunity.
Sci Adv, 6, 2020
6SB4
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BU of 6sb4 by Molmil
Crystal structure of murine perforin-2 P2 domain crystal form 2
Descriptor: Macrophage-expressed gene 1 protein
Authors:Ni, T, Yu, X, Ginger, L, Gilbert, R.J.C.
Deposit date:2019-07-18
Release date:2020-02-05
Last modified:2020-02-26
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Structure and mechanism of bactericidal mammalian perforin-2, an ancient agent of innate immunity.
Sci Adv, 6, 2020
6SB5
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BU of 6sb5 by Molmil
CryoEM structure of murine perforin-2 ectodomain in a pore form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Macrophage-expressed gene 1 protein
Authors:Ni, T, Yu, X, Gilbert, R.J.C.
Deposit date:2019-07-18
Release date:2020-02-05
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Structure and mechanism of bactericidal mammalian perforin-2, an ancient agent of innate immunity.
Sci Adv, 6, 2020
8X7T
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BU of 8x7t by Molmil
MCM in the Apo state.
Descriptor: mini-chromosome maintenance complex 3
Authors:Ma, J, Yi, G, Ye, M, MacGregor-Chatwin, C, Sheng, Y, Lu, Y, Li, M, Gilbert, R.J.C, Zhang, P.
Deposit date:2023-11-25
Release date:2024-01-17
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:MCM in the Apo state
To Be Published
8X7U
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MCM in complex with dsDNA in presence of ATP.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, mini-chromosome maintenance complex 3
Authors:Ma, J, Yi, G, Ye, M, MacGregor-Chatwin, C, Sheng, Y, Lu, Y, Li, M, Gilbert, R.J.C, Zhang, P.
Deposit date:2023-11-25
Release date:2024-01-17
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:MCM in complex with dsDNA in presence of ATP
To Be Published
4UD5
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BU of 4ud5 by Molmil
Structural Plasticity of Cid1 Provides a Basis for its RNA Terminal Uridylyl Transferase Activity
Descriptor: POLY(A) RNA POLYMERASE PROTEIN CID1
Authors:Yates, L.A, Durrant, B.P, Fleurdepine, S, Harlos, K, Norbury, C.J, Gilbert, R.J.C.
Deposit date:2014-12-07
Release date:2015-03-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Structural Plasticity of Cid1 Provides a Basis for its Distributive RNA Terminal Uridylyl Transferase Activity.
Nucleic Acids Res., 43, 2015
7PLN
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Structure of the APCbeta domain of Plasmodium vivax perforin-like protein 1
Descriptor: Sporozoite micronemal protein essential for cell traversal, putative
Authors:Williams, S.I, Ni, T, Yu, X, Gilbert, R.J.C.
Deposit date:2021-08-31
Release date:2022-06-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural, Functional and Computational Studies of Membrane Recognition by Plasmodium Perforin-Like Proteins 1 and 2
J.Mol.Biol., 434, 2022
1OEB
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BU of 1oeb by Molmil
Mona/Gads SH3C domain
Descriptor: CADMIUM ION, GRB2-RELATED ADAPTOR PROTEIN 2, LYMPHOCYTE CYTOSOLIC PROTEIN 2
Authors:Harkiolaki, M, Lewitzky, M, Gilbert, R.J.C, Jones, E.Y, Bourette, R.P, Mouchiroud, G, Sondermann, H, Moarefi, I, Feller, S.M.
Deposit date:2003-03-24
Release date:2003-04-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural Basis for SH3 Domain-Mediated High-Affinity Binding between Mona/Gads and Slp-76
Embo J., 22, 2003
5OUP
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BU of 5oup by Molmil
Structure of TgPLP1 MACPF domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Perforin-like protein 1
Authors:Ni, T, Gilbert, R.J.C.
Deposit date:2017-08-24
Release date:2018-04-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structures of monomeric and oligomeric forms of theToxoplasma gondiiperforin-like protein 1.
Sci Adv, 4, 2018
7PGK
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BU of 7pgk by Molmil
HHIP-N, the N-terminal domain of the Hedgehog-Interacting Protein (HHIP), in complex with glycosaminoglycan mimic SOS
Descriptor: 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose, Hedgehog-interacting protein
Authors:Griffiths, S.C, Schwab, R.A, El Omari, K, Bishop, B, Iverson, E.J, Malinuskas, T, Dubey, R, Qian, M, Covey, D.F, Gilbert, R.J.C, Rohatgi, R, Siebold, C.
Deposit date:2021-08-14
Release date:2021-12-15
Last modified:2021-12-22
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Hedgehog-Interacting Protein is a multimodal antagonist of Hedgehog signalling.
Nat Commun, 12, 2021
7PGL
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BU of 7pgl by Molmil
HHIP-N, the N-terminal domain of the Hedgehog-Interacting Protein (HHIP), apo-form
Descriptor: Hedgehog-interacting protein
Authors:Griffiths, S.C, Schwab, R.A, El Omari, K, Bishop, B, Iverson, E.J, Malinuskas, T, Dubey, R, Qian, M, Covey, D.F, Gilbert, R.J.C, Rohatgi, R, Siebold, C.
Deposit date:2021-08-14
Release date:2021-12-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Hedgehog-Interacting Protein is a multimodal antagonist of Hedgehog signalling.
Nat Commun, 12, 2021
7PGN
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BU of 7pgn by Molmil
HHP-C in complex with glycosaminoglycan mimic SOS
Descriptor: 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose, CALCIUM ION, GLYCEROL, ...
Authors:Griffiths, S.C, Schwab, R.A, El Omari, K, Bishop, B, Iverson, E.J, Malinuskas, T, Dubey, R, Qian, M, Covey, D.F, Gilbert, R.J.C, Rohatgi, R, Siebold, C.
Deposit date:2021-08-14
Release date:2021-12-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Hedgehog-Interacting Protein is a multimodal antagonist of Hedgehog signalling.
Nat Commun, 12, 2021
7PGM
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HHIP-C in complex with heparin
Descriptor: 2-O-sulfo-alpha-L-idopyranuronic acid-(1-3)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, Hedgehog-interacting protein
Authors:Griffiths, S.C, Schwab, R.A, El Omari, K, Bishop, B, Iverson, E.J, Malinuskas, T, Dubey, R, Qian, M, Covey, D.F, Gilbert, R.J.C, Rohatgi, R, Siebold, C.
Deposit date:2021-08-14
Release date:2021-12-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Hedgehog-Interacting Protein is a multimodal antagonist of Hedgehog signalling.
Nat Commun, 12, 2021
5OUO
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BU of 5ouo by Molmil
Structure of TgPLP1 APCbeta domain
Descriptor: CHLORIDE ION, MAGNESIUM ION, Perforin-like protein 1
Authors:Ni, T, Gilbert, R.J.C.
Deposit date:2017-08-24
Release date:2018-04-11
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.11 Å)
Cite:Structures of monomeric and oligomeric forms of theToxoplasma gondiiperforin-like protein 1.
Sci Adv, 4, 2018
5OWN
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BU of 5own by Molmil
Structure of TgPLP1 MACPF domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Perforin-like protein 1
Authors:Ni, T, Gilbert, R.J.C.
Deposit date:2017-09-01
Release date:2018-04-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Structures of monomeric and oligomeric forms of theToxoplasma gondiiperforin-like protein 1.
Sci Adv, 4, 2018
3OSK
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BU of 3osk by Molmil
Crystal structure of human CTLA-4 apo homodimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cytotoxic T-lymphocyte protein 4, GLYCEROL
Authors:Yu, C, Sonnen, A.F.-P, Ikemizu, S, Stuart, D.I, Gilbert, R.J.C, Davis, S.J.
Deposit date:2010-09-09
Release date:2010-12-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Rigid-body ligand recognition drives cytotoxic T-lymphocyte antigen 4 (CTLA-4) receptor triggering
J.Biol.Chem., 286, 2011
5OUQ
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BU of 5ouq by Molmil
Structure of TgPLP1 MACPF domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Perforin-like protein 1
Authors:Ni, T, Gilbert, R.J.C.
Deposit date:2017-08-24
Release date:2018-04-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (5.11 Å)
Cite:Structures of monomeric and oligomeric forms of theToxoplasma gondiiperforin-like protein 1.
Sci Adv, 4, 2018
5OPG
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Structure of the Hantaan virus Gn glycoprotein ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, SULFATE ION, ...
Authors:Rissanen, I, Stass, R, Zeltina, A, Li, S, Hepojoki, J, Harlos, K, Gilbert, R.J.C, Huiskonen, J.T, Bowden, T.A.
Deposit date:2017-08-09
Release date:2017-08-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Transitions of the Conserved and Metastable Hantaviral Glycoprotein Envelope.
J. Virol., 91, 2017
5FMV
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Crystal structure of human CD45 extracellular region, domains d1-d4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE C, SULFATE ION
Authors:Chang, V.T, Fernandes, R.A, Ganzinger, K.A, Lee, S.F, Siebold, C, McColl, J, Jonsson, P, Palayret, M, Harlos, K, Coles, C.H, Jones, E.Y, Lui, Y, Huang, E, Gilbert, R.J.C, Klenerman, D, Aricescu, A.R, Davis, S.J.
Deposit date:2015-11-09
Release date:2016-03-23
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Initiation of T Cell Signaling by Cd45 Segregation at 'Close Contacts'.
Nat.Immunol., 17, 2016
5FN6
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Crystal structure of human CD45 extracellular region, domains d1-d3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE C
Authors:Chang, V.T, Fernandes, R.A, Ganzinger, K.A, Lee, S.F, Siebold, C, McColl, J, Jonsson, P, Palayret, M, Harlos, K, Coles, C.H, Jones, E.Y, Lui, Y, Huang, E, Gilbert, R.J.C, Klenerman, D, Aricescu, A.R, Davis, S.J.
Deposit date:2015-11-10
Release date:2016-03-23
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Initiation of T Cell Signaling by Cd45 Segregation at 'Close Contacts'.
Nat.Immunol., 17, 2016
5FN8
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Crystal structure of rat CD45 extracellular region, domains d3-d4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CITRATE ANION, RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE C
Authors:Chang, V.T, Fernandes, R.A, Ganzinger, K.A, Lee, S.F, Siebold, C, McColl, J, Jonsson, P, Palayret, M, Harlos, K, Coles, C.H, Jones, E.Y, Lui, Y, Huang, E, Gilbert, R.J.C, Klenerman, D, Aricescu, A.R, Davis, S.J.
Deposit date:2015-11-11
Release date:2016-03-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Initiation of T Cell Signaling by Cd45 Segregation at 'Close Contacts'.
Nat.Immunol., 17, 2016
5FN7
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Crystal structure of human CD45 extracellular region, domains d1-d2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MERCURY (II) ION, RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE C
Authors:Chang, V.T, Fernandes, R.A, Ganzinger, K.A, Lee, S.F, Siebold, C, McColl, J, Jonsson, P, Palayret, M, Harlos, K, Coles, C.H, Jones, E.Y, Lui, Y, Huang, E, Gilbert, R.J.C, Klenerman, D, Aricescu, A.R, Davis, S.J.
Deposit date:2015-11-10
Release date:2016-03-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Initiation of T Cell Signaling by Cd45 Segregation at 'Close Contacts'.
Nat.Immunol., 17, 2016

 

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