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PDB: 21 results

3REP
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BU of 3rep by Molmil
Crystal structure of the ILK/alpha-parvin core complex (MnATP)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Alpha-parvin, Integrin-linked kinase, ...
Authors:Fukuda, K, Qin, J.
Deposit date:2011-04-04
Release date:2011-04-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the ILK/alpha-parvin core complex (MnATP)
To be Published
6MIB
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BU of 6mib by Molmil
Crystal structure of the ILK ATP-binding deficient mutant (L207W)/alpha-parvin core complex
Descriptor: Alpha-parvin, Integrin-linked protein kinase
Authors:Fukuda, K, Qin, J.
Deposit date:2018-09-19
Release date:2018-11-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Non-catalytic signaling by pseudokinase ILK for regulating cell adhesion.
Nat Commun, 9, 2018
7LT9
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BU of 7lt9 by Molmil
Crystal structure of Ras suppressor-1 in complex with PINCH-1 LIM4-5 domains
Descriptor: LIM and senescent cell antigen-like-containing domain protein 1, Ras suppressor protein 1, ZINC ION
Authors:Fukuda, K, Qin, J.
Deposit date:2021-02-19
Release date:2021-04-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.050112 Å)
Cite:Molecular basis for Ras suppressor-1 binding to PINCH-1 in focal adhesion assembly.
J.Biol.Chem., 296, 2021
7LT8
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BU of 7lt8 by Molmil
Crystal structure of Ras suppressor-1
Descriptor: Ras suppressor protein 1
Authors:Fukuda, K, Qin, J.
Deposit date:2021-02-19
Release date:2021-04-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.76000249 Å)
Cite:Molecular basis for Ras suppressor-1 binding to PINCH-1 in focal adhesion assembly.
J.Biol.Chem., 296, 2021
3KMW
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BU of 3kmw by Molmil
Crystal structure of the ILK/alpha-parvin core complex (MgATP)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Alpha-parvin, Integrin-linked kinase, ...
Authors:Fukuda, K, Qin, J.
Deposit date:2009-11-11
Release date:2009-12-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:The pseudoactive site of ILK is essential for its binding to alpha-Parvin and localization to focal adhesions.
Mol.Cell, 36, 2009
3KMU
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BU of 3kmu by Molmil
Crystal structure of the ILK/alpha-parvin core complex (apo)
Descriptor: Alpha-parvin, Integrin-linked kinase
Authors:Fukuda, K, Qin, J.
Deposit date:2009-11-11
Release date:2009-12-29
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The pseudoactive site of ILK is essential for its binding to alpha-Parvin and localization to focal adhesions.
Mol.Cell, 36, 2009
2MSU
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BU of 2msu by Molmil
NMR structure of Kindlin-2 F2 339-358
Descriptor: Fermitin family homolog 2
Authors:Fukuda, K, Bledzka, K, Yang, J, Perera, H.D.
Deposit date:2014-08-05
Release date:2014-08-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Molecular Basis of Kindlin-2 Binding to Integrin-linked Kinase Pseudokinase for Regulating Cell Adhesion.
J.Biol.Chem., 289, 2014
1C3A
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BU of 1c3a by Molmil
CRYSTAL STRUCTURE OF FLAVOCETIN-A FROM THE HABU SNAKE VENOM, A NOVEL CYCLIC TETRAMER OF C-TYPE LECTIN-LIKE HETERODIMERS
Descriptor: FLAVOCETIN-A: ALPHA SUBUNIT, FLAVOCETIN-A: BETA SUBUNIT
Authors:Fukuda, K, Mizuno, H, Atoda, H, Morita, T.
Deposit date:1999-07-27
Release date:2000-03-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of flavocetin-A, a platelet glycoprotein Ib-binding protein, reveals a novel cyclic tetramer of C-type lectin-like heterodimers.
Biochemistry, 39, 2000
1U0N
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BU of 1u0n by Molmil
The ternary von Willebrand Factor A1-glycoprotein Ibalpha-botrocetin complex
Descriptor: Botrocetin, Platelet glycoprotein Ib, Von Willebrand factor
Authors:Fukuda, K, Liddington, R.C.
Deposit date:2004-07-13
Release date:2005-04-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:The snake venom protein botrocetin acts as a biological brace to promote dysfunctional platelet aggregation
Nat.Struct.Mol.Biol., 12, 2005
1U0O
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BU of 1u0o by Molmil
The mouse von Willebrand Factor A1-botrocetin complex
Descriptor: Botrocetin, von Willebrand factor
Authors:Fukuda, K, Liddington, R.C.
Deposit date:2004-07-14
Release date:2005-04-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The snake venom protein botrocetin acts as a biological brace to promote dysfunctional platelet aggregation
Nat.Struct.Mol.Biol., 12, 2005
1IJB
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BU of 1ijb by Molmil
The von Willebrand Factor mutant (I546V) A1 domain
Descriptor: von Willebrand factor
Authors:Fukuda, K, Doggett, T.A, Bankston, L.A, Cruz, M.A, Diacovo, T.G, Liddington, R.C.
Deposit date:2001-04-25
Release date:2002-07-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of von Willebrand factor activation by the snake toxin botrocetin.
Structure, 10, 2002
1IJK
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BU of 1ijk by Molmil
The von Willebrand Factor mutant (I546V) A1 domain-botrocetin Complex
Descriptor: Botrocetin, von Willebrand factor
Authors:Fukuda, K, Doggett, T.A, Bankston, L.A, Cruz, M.A, Diacovo, T.G, Liddington, R.C.
Deposit date:2001-04-26
Release date:2002-07-10
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of von Willebrand factor activation by the snake toxin botrocetin.
Structure, 10, 2002
6LP1
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BU of 6lp1 by Molmil
Crystal structure of acetate:succinate CoA transferase (ASCT) from Trypanosoma brucei.
Descriptor: CALCIUM ION, GLYCEROL, Succinyl-CoA:3-ketoacid-coenzyme A transferase
Authors:Mochizuki, K, Inaoka, D.K, Shiba, T, Fukuda, K, Kurasawa, H, Mazet, M, Millerioux, Y, Bringaud, F, Boshart, M, Balogun, E.O, Harada, S, Hirayama, K, Kita, K.
Deposit date:2020-01-08
Release date:2020-10-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:The ASCT/SCS cycle fuels mitochondrial ATP and acetate production in Trypanosoma brucei.
Biochim Biophys Acta Bioenerg, 1861, 2020
8I3Y
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BU of 8i3y by Molmil
Crystal structure of ASCT from Trypanosoma brucei in complex with Succinyl-CoA.
Descriptor: CALCIUM ION, SUCCINIC ACID, SUCCINYL-COENZYME A, ...
Authors:Mochizuki, K, Inaoka, D.K, Fukuda, K, Kurasawa, H, Iyoda, K, Nakai, U, Harada, S, Balogun, E.O, Mazet, M, Millerioux, Y, Bringaud, F, Boshart, M, Hirayama, K, Kita, K, Shiba, T.
Deposit date:2023-01-18
Release date:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of ASCT from Trypanosoma brucei in complex with Succinyl-CoA.
To Be Published
8I40
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BU of 8i40 by Molmil
Crystal structure of ASCT from Trypanosoma brucei in complex with CoA.
Descriptor: ACETATE ION, CALCIUM ION, COENZYME A, ...
Authors:Mochizuki, K, Inaoka, D.K, Fukuda, K, Kurasawa, H, Iyoda, K, Nakai, U, Harada, S, Balogun, E.O, Mazet, M, Millerioux, Y, Bringaud, F, Boshart, M, Hirayama, K, Kita, K, Shiba, T.
Deposit date:2023-01-18
Release date:2024-01-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Crystal structure of ligand complexes of ASCT from Trypanosoma brucei and molecular mechanism in comparison with mammalian SCOT.
To Be Published
2K2R
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BU of 2k2r by Molmil
The NMR structure of alpha-parvin CH2/paxillin LD1 complex
Descriptor: Alpha-parvin, Paxillin
Authors:Wang, X, Fukuda, K, Byeon, I, Velyvis, A, Wu, C, Gronenborn, A, Qin, J.
Deposit date:2008-04-10
Release date:2008-05-27
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The Structure of {alpha}-Parvin CH2-Paxillin LD1 Complex Reveals a Novel Modular Recognition for Focal Adhesion Assembly.
J.Biol.Chem., 283, 2008
1UL1
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BU of 1ul1 by Molmil
Crystal structure of the human FEN1-PCNA complex
Descriptor: Flap endonuclease-1, MAGNESIUM ION, Proliferating cell nuclear antigen
Authors:Sakurai, S, Kitano, K, Yamaguchi, H, Hamada, K, Okada, K, Fukuda, K, Uchida, M, Ohtsuka, E, Morioka, H, Hakoshima, T.
Deposit date:2003-09-05
Release date:2005-03-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for recruitment of human flap endonuclease 1 to PCNA
EMBO J., 24, 2005
2LKO
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BU of 2lko by Molmil
Structural Basis of Phosphoinositide Binding to Kindlin-2 Pleckstrin Homology Domain in Regulating Integrin Activation
Descriptor: Fermitin family homolog 2, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE
Authors:Liu, J, Fukuda, K, Xu, Z.
Deposit date:2011-10-17
Release date:2011-10-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of phosphoinositide binding to kindlin-2 protein pleckstrin homology domain in regulating integrin activation.
J.Biol.Chem., 286, 2011
2OTN
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BU of 2otn by Molmil
Crystal structure of the catalytically active form of diaminopimelate epimerase from Bacillus anthracis
Descriptor: Diaminopimelate epimerase
Authors:Matho, M.H, Fukuda, K, Santelli, E, Jaroszewski, L, Liddington, R.C, Roper, D.
Deposit date:2007-02-08
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure and inhibition of a catalytically active form of diaminopimelate epimerase (DapF)from Bacillus anthracis
To be Published
2MWN
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BU of 2mwn by Molmil
Talin-F3 / RIAM N-terminal Peptide complex
Descriptor: Amyloid beta A4 precursor protein-binding family B member 1-interacting protein, Talin-1
Authors:Yang, J, Zhu, L, Zhang, H, Hirbawi, J, Fukuda, K, Dwivedi, P, Liu, J, Byzova, T, Plow, E.F, Wu, J, Qin, J.
Deposit date:2014-11-13
Release date:2014-12-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Conformational activation of talin by RIAM triggers integrin-mediated cell adhesion.
Nat Commun, 5, 2014
1JWI
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BU of 1jwi by Molmil
Crystal Structure of Bitiscetin, a von Willeband Factor-dependent Platelet Aggregation Inducer.
Descriptor: bitiscetin, platelet aggregation inducer
Authors:Hirotsu, S, Mizuno, H, Fukuda, K, Qi, M.C, Matsui, T, Hamako, J, Morita, T, Titani, K.
Deposit date:2001-09-04
Release date:2001-11-28
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of bitiscetin, a von Willebrand factor-dependent platelet aggregation inducer.
Biochemistry, 40, 2001

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