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PDB: 104 results

1OSH
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A Chemical, Genetic, and Structural Analysis of the nuclear bile acid receptor FXR
Descriptor: Bile acid receptor, METHYL 3-{3-[(CYCLOHEXYLCARBONYL){[4'-(DIMETHYLAMINO)BIPHENYL-4-YL]METHYL}AMINO]PHENYL}ACRYLATE
Authors:Downes, M, Verdecia, M.A, Roecker, A.J, Hughes, R, Hogenesch, J.B, Kast-Woelbern, H.R, Bowman, M.E, Ferrer, J.-L, Anisfeld, A.M, Edwards, P.A, Rosenfeld, J.M, Alvarez, J.G.A, Noel, J.P, Nicolaou, K.C, Evans, R.M.
Deposit date:2003-03-19
Release date:2003-09-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A chemical, genetic, and structural analysis of the nuclear bile acid receptor FXR
Mol.Cell, 11, 2003
3QYW
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Crystal structure of ERK2 in complex with an inhibitor
Descriptor: 6-(3-bromophenyl)-7H-purin-2-amine, DIMETHYL SULFOXIDE, Mitogen-activated protein kinase 1, ...
Authors:Gelin, M, Pochet, S, Hoh, F, Pirochi, M, Guichou, J.-F, Ferrer, J.-L, Labesse, G.
Deposit date:2011-03-04
Release date:2011-08-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:In-plate protein crystallization, in situ ligand soaking and X-ray diffraction.
Acta Crystallogr.,Sect.D, 67, 2011
3QYZ
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Crystal structure of ERK2 in complex with an inhibitor
Descriptor: 5'-azido-8-bromo-5'-deoxyadenosine, BETA-MERCAPTOETHANOL, DIMETHYL SULFOXIDE, ...
Authors:Gelin, M, Pochet, S, Hoh, F, Pirochi, M, Guichou, J.-F, Ferrer, J.-L, Labesse, G.
Deposit date:2011-03-04
Release date:2011-08-24
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:In-plate protein crystallization, in situ ligand soaking and X-ray diffraction.
Acta Crystallogr.,Sect.D, 67, 2011
2P0U
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crystal structure of Marchantia polymorpha stilbenecarboxylate synthase 2 (STCS2)
Descriptor: GLYCEROL, NICKEL (II) ION, SULFATE ION, ...
Authors:Borel, F, Schroeder, G, Schroeder, J, Ferrer, J.-L.
Deposit date:2007-03-01
Release date:2007-03-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:crystal structure of Marchantia polymorpha stilbenecarboxylate synthase 2 (STCS2)
To be Published
3HJU
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Crystal structure of human monoglyceride lipase
Descriptor: GLYCEROL, Monoglyceride lipase
Authors:Labar, G, Bauvois, C, Borel, F, Ferrer, J.-L, Wouters, J, Lambert, D.M.
Deposit date:2009-05-22
Release date:2009-12-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of the Human Monoacylglycerol Lipase, a Key Actor in Endocannabinoid Signaling
Chembiochem, 11, 2010
1KYZ
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Crystal Structure Analysis of Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase Ferulic Acid Complex
Descriptor: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, Caffeic acid 3-O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Zubieta, C, Kota, P, Ferrer, J.-L, Dixon, R.A, Noel, J.P.
Deposit date:2002-02-06
Release date:2002-08-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the modulation of lignin monomer methylation by caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase.
Plant Cell, 14, 2002
1KYW
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Crystal Structure Analysis of Caffeic Acid/5-hydroxyferulic acid 3/5-O-methyltransferase in complex with 5-hydroxyconiferaldehyde
Descriptor: 5-(3,3-DIHYDROXYPROPENY)-3-METHOXY-BENZENE-1,2-DIOL, Caffeic acid 3-O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Zubieta, C, Kota, P, Ferrer, J.-L, Dixon, R.A, Noel, J.P.
Deposit date:2002-02-06
Release date:2002-08-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the modulation of lignin monomer methylation by caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase.
Plant Cell, 14, 2002
3CIA
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BU of 3cia by Molmil
Crystal structure of cold-aminopeptidase from Colwellia psychrerythraea
Descriptor: ZINC ION, cold-active aminopeptidase
Authors:Bauvois, C, Jacquamet, L, Borel, F, Ferrer, J.-L.
Deposit date:2008-03-11
Release date:2008-07-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of the Cold-active Aminopeptidase from Colwellia psychrerythraea, a Close Structural Homologue of the Human Bifunctional Leukotriene A4 Hydrolase.
J.Biol.Chem., 283, 2008
3DOX
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BU of 3dox by Molmil
X-ray structure of HIV-1 protease in situ product complex
Descriptor: A PEPTIDE SUBSTRATE-PIV, A PEPTIDE SUBSTRATE-SQNY, HIV-1 PROTEASE
Authors:Hosur, M.V, Ferrer, J.-L, Das, A, Prashar, V, Bihani, S.
Deposit date:2008-07-07
Release date:2008-09-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structure of HIV-1 protease in situ product complex
Proteins, 74, 2009
5MH6
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D-2-hydroxyacid dehydrogenases (D2-HDH) from Haloferax mediterranei in complex with 2-ketohexanoic acid and NAD+ (1.35 A resolution)
Descriptor: 1,2-ETHANEDIOL, 2-Ketohexanoic acid, D-2-hydroxyacid dehydrogenase, ...
Authors:Bisson, C, Baker, P.J, Domenech Perez, J, Pramanpol, N, Harding, S.E, Rice, D.W, Ferrer, J.
Deposit date:2016-11-23
Release date:2018-06-06
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Productive ternary complexes of D-2-hydroxyacid dehydrogenase provide insights into the chiral specificity of its reaction mechanism
To Be Published
1KNJ
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Co-Crystal Structure of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate Synthase (ispF) from E. coli Involved in Mevalonate-Independent Isoprenoid Biosynthesis, Complexed with CMP/MECDP/Mn2+
Descriptor: 2C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, CYTIDINE-5'-MONOPHOSPHATE, ...
Authors:Richard, S.B, Ferrer, J.L, Bowman, M.E, Lillo, A.M, Tetzlaff, C.N, Cane, D.E, Noel, J.P.
Deposit date:2001-12-18
Release date:2002-06-18
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase. An enzyme in the mevalonate-independent isoprenoid biosynthetic pathway.
J.Biol.Chem., 277, 2002
1ZGJ
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Crystal structure of isoflavanone 4'-O-methyltransferase complexed with (+)-pisatin
Descriptor: (6AR,12AR)-3-(HYDROXYMETHYL)-6H-[1,3]DIOXOLO[5,6][1]BENZOFURO[3,2-C]CHROMEN-6A(12AH)-OL, Isoflavanone 4'-O-methyltransferase', S-ADENOSYL-L-HOMOCYSTEINE
Authors:Liu, C.-J, Deavours, B.E, Richard, S, Ferrer, J.-L, Dixon, R.A, Noel, J.P.
Deposit date:2005-04-21
Release date:2006-08-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for dual functionality of isoflavonoid O-methyltransferases in the evolution of plant defense responses.
Plant Cell, 18, 2006
1ZGA
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Crystal structure of isoflavanone 4'-O-methyltransferase complexed with (+)-6a-hydroxymaackiain
Descriptor: (6AR,12AR)-6H-[1,3]DIOXOLO[5,6][1]BENZOFURO[3,2-C]CHROMENE-3,6A(12AH)-DIOL, Isoflavanone 4'-O-methyltransferase', S-ADENOSYL-L-HOMOCYSTEINE
Authors:Liu, C.-J, Deavours, B.E, Richard, S, Ferrer, J.-L, Dixon, R.A, Noel, J.P.
Deposit date:2005-04-20
Release date:2006-08-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis for dual functionality of isoflavonoid O-methyltransferases in the evolution of plant defense responses.
Plant Cell, 18, 2006
1ZG3
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BU of 1zg3 by Molmil
Crystal structure of the isoflavanone 4'-O-methyltransferase complexed with SAH and 2,7,4'-trihydroxyisoflavanone
Descriptor: (2S,3R)-2,7-DIHYDROXY-3-(4-HYDROXYPHENYL)-2,3-DIHYDRO-4H-CHROMEN-4-ONE, S-ADENOSYL-L-HOMOCYSTEINE, isoflavanone 4'-O-methyltransferase
Authors:Liu, C.-J, Deavours, B.E, Richard, S, Ferrer, J.-L, Dixon, R.A, Noel, J.P.
Deposit date:2005-04-20
Release date:2006-08-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis for dual functionality of isoflavonoid O-methyltransferases in the evolution of plant defense responses.
Plant Cell, 18, 2006
1KNK
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BU of 1knk by Molmil
Crystal Structure of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate Synthase (ispF) from E. coli involved in Mevalonate-Independent Isoprenoid Biosynthesis
Descriptor: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, MANGANESE (II) ION
Authors:Richard, S.B, Ferrer, J.L, Bowman, M.E, Lillo, A.M, Tetzlaff, C.N, Cane, D.E, Noel, J.P.
Deposit date:2001-12-18
Release date:2002-06-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase. An enzyme in the mevalonate-independent isoprenoid biosynthetic pathway.
J.Biol.Chem., 277, 2002
1ZHF
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Crystal structure of selenomethionine substituted isoflavanone 4'-O-methyltransferase
Descriptor: Isoflavanone 4'-O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Liu, C.-J, Deavours, B.E, Richard, S, Ferrer, J.-L, Dixon, R.A, Noel, J.P.
Deposit date:2005-04-25
Release date:2006-08-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for dual functionality of isoflavonoid O-methyltransferases in the evolution of plant defense responses.
Plant Cell, 18, 2006
3ZGN
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BU of 3zgn by Molmil
Crystal structures of Escherichia coli IspH in complex with TMBPP a potent inhibitor of the methylerythritol phosphate pathway
Descriptor: (2E)-3-methyl-4-sulfanylbut-2-en-1-yl trihydrogen diphosphate, 4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE, IRON/SULFUR CLUSTER
Authors:Borel, F, Barbier, E, Kratsutsky, S, Janthawornpong, K, Rohmer, M, Dale Poulter, C, Ferrer, J.L, Seemann, M.
Deposit date:2012-12-18
Release date:2013-01-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Further Insight into Crystal Structures of Escherichia coli IspH/LytB in Complex with Two Potent Inhibitors of the MEP Pathway: A Starting Point for Rational Design of New Antimicrobials.
Chembiochem, 18, 2017
3ZGL
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Crystal structures of Escherichia coli IspH in complex with AMBPP a potent inhibitor of the methylerythritol phosphate pathway
Descriptor: (2E)-4-amino-3-methylbut-2-en-1-yl trihydrogen diphosphate, 4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE, IRON/SULFUR CLUSTER
Authors:Borel, F, Barbier, E, Kratsutsky, S, Janthawornpong, K, Rohmer, M, Dale Poulter, C, Ferrer, J.L, Seemann, M.
Deposit date:2012-12-18
Release date:2013-01-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Further Insight into Crystal Structures of Escherichia coli IspH/LytB in Complex with Two Potent Inhibitors of the MEP Pathway: A Starting Point for Rational Design of New Antimicrobials.
Chembiochem, 18, 2017
4A0H
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Structure of bifunctional DAPA aminotransferase-DTB synthetase from Arabidopsis thaliana bound to 7-keto 8-amino pelargonic acid (KAPA)
Descriptor: 7-KETO-8-AMINOPELARGONIC ACID, ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE, L(+)-TARTARIC ACID, ...
Authors:Cobessi, D, Dumas, R, Pautre, V, Meinguet, C, Ferrer, J.L, Alban, C.
Deposit date:2011-09-09
Release date:2012-06-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.808 Å)
Cite:Biochemical and Structural Characterization of the Arabidopsis Bifunctional Enzyme Dethiobiotin Synthetase-Diaminopelargonic Acid Aminotransferase: Evidence for Substrate Channeling in Biotin Synthesis.
Plant Cell, 24, 2012
3F8N
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Crystal structure of PerR-Zn-Mn
Descriptor: MANGANESE (II) ION, Peroxide operon regulator, ZINC ION
Authors:Traore, D.A.K, Ferrer, J.-L, Jacquamet, L, Duarte, V, Latour, J.-M.
Deposit date:2008-11-13
Release date:2009-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural characterization of the active form of PerR: insights into the metal-induced activation of PerR and Fur proteins for DNA binding
Mol.Microbiol., 73, 2009
3FRO
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BU of 3fro by Molmil
Crystal structure of Pyrococcus abyssi glycogen synthase with open and closed conformations
Descriptor: 1,5-anhydro-D-fructose, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GlgA glycogen synthase, ...
Authors:Diaz, A, Guinovart, J.J, Fita, I, Ferrer, J.C.
Deposit date:2009-01-08
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Lyase activity of glycogen synthase: Is an elimination/addition mechanism a possible reaction pathway for retaining glycosyltransferases?
IUBMB Life, 64, 2012
1D6I
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CHALCONE SYNTHASE (H303Q MUTANT)
Descriptor: CHALCONE SYNTHASE, SULFATE ION
Authors:Jez, J.M, Ferrer, J.L, Bowman, M.E, Dixon, R.A, Noel, J.P.
Deposit date:1999-10-13
Release date:2000-02-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Dissection of malonyl-coenzyme A decarboxylation from polyketide formation in the reaction mechanism of a plant polyketide synthase.
Biochemistry, 39, 2000
1D6H
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CHALONE SYNTHASE (N336A MUTANT COMPLEXED WITH COA)
Descriptor: CHALCONE SYNTHASE, COENZYME A, SULFATE ION
Authors:Jez, J.M, Ferrer, J.L, Bowman, M.E, Dixon, R.A, Noel, J.P.
Deposit date:1999-10-13
Release date:2000-02-03
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Dissection of malonyl-coenzyme A decarboxylation from polyketide formation in the reaction mechanism of a plant polyketide synthase.
Biochemistry, 39, 2000
3L01
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BU of 3l01 by Molmil
Crystal structure of monomeric glycogen synthase from Pyrococcus abyssi
Descriptor: CHLORIDE ION, GLYCEROL, GlgA glycogen synthase, ...
Authors:Diaz, A, Martinez-Pons, C, Fita, I, Ferrer, J.C, Guinovart, J.J.
Deposit date:2009-12-09
Release date:2010-12-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Processivity and Subcellular Localization of Glycogen Synthase Depend on a Non-catalytic High Affinity Glycogen-binding Site.
J.Biol.Chem., 286, 2011
1D6F
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CHALCONE SYNTHASE C164A MUTANT
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHALCONE SYNTHASE, SULFATE ION
Authors:Jez, J.M, Ferrer, J.L, Bowman, M.E, Dixon, R.A, Noel, J.P.
Deposit date:1999-10-13
Release date:2000-02-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Dissection of malonyl-coenzyme A decarboxylation from polyketide formation in the reaction mechanism of a plant polyketide synthase.
Biochemistry, 39, 2000

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