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PDB: 280 results

2BLH
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Ligand Migration and Protein Fluctuations in Myoglobin Mutant L29W
Descriptor: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
Authors:Nienhaus, K, Ostermann, A, Nienhaus, G.U, Parak, F.G, Schmidt, M.
Deposit date:2005-03-04
Release date:2005-04-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Ligand Migration and Protein Fluctuations in Myoglobin Mutant L29W
Biochemistry, 44, 2005
2D3R
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Cratylia folibunda seed lectin at acidic pH
Descriptor: CALCIUM ION, Lectin alpha chain, MANGANESE (II) ION
Authors:Del Sol, F.G, Cavada, B.S, Calvete, J.J.
Deposit date:2005-09-30
Release date:2005-11-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of Cratylia floribunda seed lectin at acidic and basic pHs. Insights into the structural basis of the pH-dependent dimer-tetramer transition.
J.Struct.Biol., 158, 2007
2D3P
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Cratylia Floribunda seed lectin crystallized at basic pH
Descriptor: CALCIUM ION, Lectin alpha chain, MANGANESE (II) ION
Authors:Del Sol, F.G, Cavada, B.S, Calvete, J.J.
Deposit date:2005-09-30
Release date:2005-11-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures of Cratylia floribunda seed lectin at acidic and basic pHs. Insights into the structural basis of the pH-dependent dimer-tetramer transition.
J.Struct.Biol., 158, 2007
2A6L
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Dihydrodipicolinate synthase (E. coli)- mutant R138H
Descriptor: Dihydrodipicolinate synthase, POTASSIUM ION
Authors:Dobson, R.C, Devenish, S.R, Turner, L.A, Clifford, V.R, Pearce, F.G, Jameson, G.B, Gerrard, J.A.
Deposit date:2005-07-03
Release date:2005-10-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Role of Arginine 138 in the Catalysis and Regulation of Escherichia coli Dihydrodipicolinate Synthase.
Biochemistry, 44, 2005
2AAB
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Structural basis of antigen mimicry in a clinically relevant melanoma antigen system
Descriptor: anti-idiotypic monoclonal antibody (heavy chain), anti-idiotypic monoclonal antibody (light chain)
Authors:Chang, C.-C, Hernandez-Guzman, F.G, Luo, W, Wang, X, Ferrone, S, Ghosh, D.
Deposit date:2005-07-13
Release date:2005-10-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of antigen mimicry in a clinically relevant melanoma antigen system.
J.Biol.Chem., 280, 2005
2A4G
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Hepatitis C Protease NS3-4A serine protease with Ketoamide Inhibitor SCH225724 Bound
Descriptor: ({1-[1-CARBAMOYL-PHENYL-METHYL)-CARBAMOYL]-METHYL}-AMINOOXALYL)-BUTYLCARBAMOYL)-3-METHYL-BUTYLCARBAMOYL)-CYCLOHEXYL-METHYL)-CARBAMIC ACID ISOBUTYL ESTER, NS3 protease/helicase, NS4a peptide, ...
Authors:Arasappan, A, Njoroge, F.G, Chan, T.Y, Bennett, F, Bogen, S.L, Chen, K, Gu, H, Hong, L, Jao, E, Liu, Y.T, Lovey, R.G, Parekh, T, Pike, R.E, Pinto, P, Santhanam, B, Venkatraman, S, Vaccaro, H, Wang, H, Yang, X, Zhu, Z, Mckittrick, B, Saksena, A.K, Girijavallabhan, V, Pichardo, J, Butkiewicz, N, Ingram, R, Malcolm, B, Prongay, A.J, Yao, N, Marten, B, Madison, V, Kemp, S, Levy, O, Lim-Wilby, M, Tamura, S, Ganguly, A.K.
Deposit date:2005-06-28
Release date:2006-07-04
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Hepatitis C virus NS3-4a serine protease inhibitors. SAR of P2' moiety with improved potency.
Bioorg.Med.Chem.Lett., 15, 2005
2A6N
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Dihydrodipicolinate synthase (E. coli)- mutant R138A
Descriptor: Dihydrodipicolinate synthase, POTASSIUM ION
Authors:Dobson, R.C, Devenish, S.R, Turner, L.A, Clifford, V.R, Pearce, F.G, Jameson, G.B, Gerrard, J.A.
Deposit date:2005-07-03
Release date:2005-10-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Role of Arginine 138 in the Catalysis and Regulation of Escherichia coli Dihydrodipicolinate Synthase.
Biochemistry, 44, 2005
4BK8
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Superoxide reductase (Neelaredoxin) from Ignicoccus hospitalis
Descriptor: DESULFOFERRODOXIN, FERROUS IRON-BINDING REGION, FE (III) ION
Authors:Romao, C.V, Matias, P.M, Pinho, F.G, Sousa, C.M, Barradas, A.R, Pinto, A.F, Teixeira, M, Bandeiras, T.M.
Deposit date:2013-04-22
Release date:2014-04-02
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.847 Å)
Cite:Structure of a Natural Sor Mutant
To be Published
3GW3
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human UROD mutant K297N
Descriptor: Uroporphyrinogen decarboxylase
Authors:Hill, C.P, Phillips, J.D, Whitby, F.G, Warby, C, Kushner, J.P.
Deposit date:2009-03-31
Release date:2009-07-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and kinetic characterization of mutant human uroporphyrinogen decarboxylases.
Cell Mol Biol (Noisy-le-grand), 55, 2009
3GVQ
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UROD single-chain dimer
Descriptor: Uroporphyrinogen decarboxylase
Authors:Hill, C.P, Phillips, J.D, Warby, C, Whitby, F.G, Kushner, J.P.
Deposit date:2009-03-31
Release date:2009-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Substrate shuttling between active sites of uroporphyrinogen decarboxylase is not required to generate coproporphyrinogen.
J.Mol.Biol., 389, 2009
3GW0
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UROD mutant G318R
Descriptor: Uroporphyrinogen decarboxylase
Authors:Hill, C.P, Phillips, J.D, Whitby, F.G, Warby, C, Kushner, J.P.
Deposit date:2009-03-31
Release date:2009-07-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and kinetic characterization of mutant human uroporphyrinogen decarboxylases.
Cell Mol Biol (Noisy-le-grand), 55, 2009
3GVW
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BU of 3gvw by Molmil
Single-chain UROD F217Y (YF) mutation
Descriptor: Uroporphyrinogen decarboxylase
Authors:Hill, C.P, Phillips, J.D, Whitby, F.G, Warby, C, Kushner, J.P.
Deposit date:2009-03-31
Release date:2009-12-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Substrate shuttling between active sites of uroporphyrinogen decarboxylase is not required to generate coproporphyrinogen.
J.Mol.Biol., 389, 2009
3JRM
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Crystal structure of archaeal 20S proteasome in complex with mutated P26 activator
Descriptor: Proteasome activator protein PA26, Proteasome subunit alpha, Proteasome subunit beta
Authors:Stadtmueller, B.M, Whitby, F.G, Hill, C.P.
Deposit date:2009-09-08
Release date:2009-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural models for interactions between the 20S proteasome and its PAN/19S activators.
J.Biol.Chem., 285, 2010
3GVR
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Single-chain UROD Y164G (GY) mutation
Descriptor: Uroporphyrinogen decarboxylase
Authors:Hill, C.P, Phillips, J.D, Whitby, F.G, Warby, C.
Deposit date:2009-03-31
Release date:2009-07-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate shuttling between active sites of uroporphyrinogen decarboxylase is not required to generate coproporphyrinogen.
J.Mol.Biol., 389, 2009
3JSE
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BU of 3jse by Molmil
Crystal structure of archaeal 20S proteasome in complex with mutated P26 activator
Descriptor: Proteasome activator protein PA26, Proteasome subunit alpha, Proteasome subunit beta
Authors:Stadtmueller, B.M, Whitby, F.G, Hill, C.P.
Deposit date:2009-09-10
Release date:2009-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural models for interactions between the 20S proteasome and its PAN/19S activators.
J.Biol.Chem., 285, 2010
3GVV
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BU of 3gvv by Molmil
Single-chain UROD Y164G (GY) mutation
Descriptor: Uroporphyrinogen decarboxylase
Authors:Hill, C.P, Phillips, J.D, Whitby, F.G, Warby, C, Kushner, J.P.
Deposit date:2009-03-31
Release date:2009-07-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Substrate shuttling between active sites of uroporphyrinogen decarboxylase is not required to generate coproporphyrinogen.
J.Mol.Biol., 389, 2009
5UD6
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BU of 5ud6 by Molmil
Crystal structure of DHDPS from Cyanidioschyzon merolae with lysine bound
Descriptor: CALCIUM ION, Dihydrodipicolinate synthase, LYSINE
Authors:Watkin, S, Keown, J.R, Pearce, F.G.
Deposit date:2016-12-23
Release date:2017-12-27
Last modified:2018-12-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of DHDPS from Cyanidioschyzon merolae with lysine bound
To Be Published
5UI3
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BU of 5ui3 by Molmil
Crystal structure of DHDPS from chlamydomonas reinhardtii
Descriptor: 2-OXOGLUTARIC ACID, Dihydrodipicolinate synthase
Authors:Watkin, S, Keown, J.R, Pearce, F.G.
Deposit date:2017-01-12
Release date:2018-01-17
Last modified:2018-12-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of DHDPS from chlamydomonas reinhardtii
To Be Published
5UXT
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BU of 5uxt by Molmil
Coiled-coil Trimer with Glu:Trp:Lys Triad
Descriptor: GLYCEROL, coiled-coil trimer with Glu:Trp:Lys triad
Authors:Smith, M.S, Billings, W.M, Whitby, F.G, Miller, M.B, Price, J.L.
Deposit date:2017-02-23
Release date:2017-08-09
Method:X-RAY DIFFRACTION (2.197 Å)
Cite:Enhancing a long-range salt bridge with intermediate aromatic and nonpolar amino acids.
Org. Biomol. Chem., 15, 2017
5VKO
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BU of 5vko by Molmil
SPT6 tSH2-RPB1 1468-1500 pT1471, pS1493
Descriptor: DNA-directed RNA polymerase II subunit RPB1, ISOPROPYL ALCOHOL, Transcription elongation factor SPT6
Authors:Sdano, M.A, Whitby, F.G, Hill, C.P.
Deposit date:2017-04-21
Release date:2017-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A novel SH2 recognition mechanism recruits Spt6 to the doubly phosphorylated RNA polymerase II linker at sites of transcription.
Elife, 6, 2017
5VKL
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BU of 5vkl by Molmil
SPT6 tSH2-RPB1 1476-1500 pS1493
Descriptor: DNA-directed RNA polymerase II subunit RPB1, Transcription elongation factor SPT6
Authors:Sdano, M.A, Whitby, F.G, Hill, C.P.
Deposit date:2017-04-21
Release date:2017-10-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.198 Å)
Cite:A novel SH2 recognition mechanism recruits Spt6 to the doubly phosphorylated RNA polymerase II linker at sites of transcription.
Elife, 6, 2017
3DEN
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BU of 3den by Molmil
Structure of E. coli DHDPS mutant Y107W
Descriptor: Dihydrodipicolinate synthase, GLYCEROL, PHOSPHATE ION, ...
Authors:Pearce, F.G, Gerrard, J.A, Perugini, M.A, Jameson, G.B.
Deposit date:2008-06-10
Release date:2008-11-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutating the tight-dimer interface of dihydrodipicolinate synthase disrupts the enzyme quaternary structure: toward a monomeric enzyme
Biochemistry, 47, 2008
3EAW
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BU of 3eaw by Molmil
Replacement of Val3 in Human Thymidylate Synthase Affects Its Kinetic Properties and Intracellular Stability
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Thymidylate synthase
Authors:Huang, X, Gibson, L.M, Bell, B.J, Lovelace, L.L, Pena, M.M, Berger, F.G, Berger, S.H.
Deposit date:2008-08-26
Release date:2010-03-02
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Replacement of Val3 in human thymidylate synthase affects its kinetic properties and intracellular stability .
Biochemistry, 49, 2010
3B98
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Crystal structure of zebrafish prostacyclin synthase (cytochrome P450 8A1)
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Prostaglandin I2 synthase
Authors:Li, Y.-C, Chiang, C.-W, Yeh, H.-C, Hsu, P.-Y, Whitby, F.G, Wang, L.-H, Chan, N.-L.
Deposit date:2007-11-03
Release date:2007-11-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structures of Prostacyclin Synthase and Its Complexes with Substrate Analog and Inhibitor Reveal a Ligand-specific Heme Conformation Change
J.Biol.Chem., 283, 2008
3EF9
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Replacement of Val3 in Human Thymidylate Synthase Affects Its Kinetic Properties and Intracellular Stability
Descriptor: SULFATE ION, Thymidylate synthase
Authors:Huang, X, Gibson, L.M, Bell, B.J, Lovelace, L.L, Pena, M.M, Berger, F.G, Berger, S.H.
Deposit date:2008-09-08
Release date:2010-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Replacement of Val3 in human thymidylate synthase affects its kinetic properties and intracellular stability .
Biochemistry, 49, 2010

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