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PDB: 41042 results

2N87
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BU of 2n87 by Molmil
Solution structure of the PPIase domain of TbPar42
Descriptor: Uncharacterized protein
Authors:Rehic, E, Bayer, P.
Deposit date:2015-10-05
Release date:2016-10-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Analysis of the 42 kDa Parvulin of Trypanosoma brucei.
Biomolecules, 9, 2019
2EC0
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BU of 2ec0 by Molmil
RNA-dependent RNA polymerase of foot-and-mouth disease virus in complex with a template-primer RNA and ATP
Descriptor: 5'-R(*GP*GP*GP*CP*CP*CP*A)-3', 5'-R(P*AP*UP*GP*GP*GP*CP*CP*C)-3', MAGNESIUM ION, ...
Authors:Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N.
Deposit date:2007-02-09
Release date:2007-06-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Sequential structures provide insights into the fidelity of RNA replication
Proc.Natl.Acad.Sci.Usa, 104, 2007
2PI8
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BU of 2pi8 by Molmil
Crystal structure of E. coli MltA with bound chitohexaose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Membrane-bound lytic murein transglycosylase A, PHOSPHATE ION
Authors:van Straaten, K.E, Barends, T.R.M, Dijkstra, B.W, Thunnissen, A.M.W.H.
Deposit date:2007-04-13
Release date:2007-05-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of Escherichia coli Lytic transglycosylase MltA with bound chitohexaose: implications for peptidoglycan binding and cleavage
J.Biol.Chem., 282, 2007
2KCE
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BU of 2kce by Molmil
BINDING OF THE ANTICANCER DRUG ZD1694 TO E. COLI THYMIDYLATE SYNTHASE: ASSESSING SPECIFICITY AND AFFINITY
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE, TOMUDEX
Authors:Rutenber, E.E, Stroud, R.M.
Deposit date:1997-06-09
Release date:1997-11-19
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Binding of the anticancer drug ZD1694 to E. coli thymidylate synthase: assessing specificity and affinity.
Structure, 4, 1996
2Q3O
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BU of 2q3o by Molmil
Ensemble refinement of the protein crystal structure of 12-oxo-phytodienoate reductase isoform 3
Descriptor: 12-oxophytodienoate reductase 3, FLAVIN MONONUCLEOTIDE
Authors:Levin, E.J, Kondrashov, D.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-05-30
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ensemble refinement of protein crystal structures: validation and application.
Structure, 15, 2007
2Q4K
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BU of 2q4k by Molmil
Ensemble refinement of the protein crystal structure of gene product from Homo sapiens Hs.433573
Descriptor: Uncharacterized protein C11orf68
Authors:Levin, E.J, Kondrashov, D.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-05-31
Release date:2007-06-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ensemble refinement of protein crystal structures: validation and application.
Structure, 15, 2007
5X1B
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BU of 5x1b by Molmil
CO bound cytochrome c oxidase at 20 nsec after pump laser irradiation to release CO from O2 reduction center
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
Authors:Shimada, A, Kubo, M, Baba, S, Yamashita, K, Hirata, K, Ueno, G, Nomura, T, Kimura, T, Shinzawa-Itoh, K, Baba, J, Hatano, K, Eto, Y, Miyamoto, A, Murakami, H, Kumasaka, T, Owada, S, Tono, K, Yabashi, M, Yamaguchi, Y, Yanagisawa, S, Sakaguchi, M, Ogura, T, Komiya, R, Yan, J, Yamashita, E, Yamamoto, M, Ago, H, Yoshikawa, S, Tsukihara, T.
Deposit date:2017-01-25
Release date:2017-08-09
Last modified:2017-12-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A nanosecond time-resolved XFEL analysis of structural changes associated with CO release from cytochrome c oxidase.
Sci Adv, 3, 2017
8AIS
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BU of 8ais by Molmil
Crystal structure of cutinase PsCut from Pseudomonas saudimassiliensis
Descriptor: ACETATE ION, Lipase 1
Authors:Zahn, M, Allen, M.D, Pickford, A.R, McGeehan, J.E.
Deposit date:2022-07-27
Release date:2023-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Concentration-Dependent Inhibition of Mesophilic PETases on Poly(ethylene terephthalate) Can Be Eliminated by Enzyme Engineering.
ChemSusChem, 16, 2023
5LZP
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BU of 5lzp by Molmil
Binding of the C-terminal GQYL motif of the bacterial proteasome activator Bpa to the 20S proteasome
Descriptor: Bacterial proteasome activator, Proteasome subunit alpha, Proteasome subunit beta
Authors:Bolten, M, Delley, C.L, Leibundgut, M, Boehringer, D, Ban, N, Weber-Ban, E.
Deposit date:2016-09-30
Release date:2016-11-23
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural Analysis of the Bacterial Proteasome Activator Bpa in Complex with the 20S Proteasome.
Structure, 24, 2016
7U5J
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BU of 7u5j by Molmil
Cryo-EM Structure of ALDOA
Descriptor: Fructose-bisphosphate aldolase
Authors:Morgan, C.E, Zhang, Z, Yu, E.W.
Deposit date:2022-03-02
Release date:2022-12-14
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Toward structural-omics of the bovine retinal pigment epithelium.
Cell Rep, 41, 2022
5LXY
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BU of 5lxy by Molmil
Structure of the minimal RBM7 - ZCCHC8 Complex
Descriptor: BROMIDE ION, RNA-binding protein 7, Zinc finger CCHC domain-containing protein 8
Authors:Falk, S, Finogenova, K, Benda, C, Conti, E.
Deposit date:2016-09-23
Release date:2016-12-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure of the RBM7-ZCCHC8 core of the NEXT complex reveals connections to splicing factors.
Nat Commun, 7, 2016
8ASJ
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BU of 8asj by Molmil
Four subunit cytochrome b-c1 complex from Rhodobacter sphaeroides in native nanodiscs - focussed refinement in the b-c conformation
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Cytochrome b, Cytochrome b-c1 subunit IV, ...
Authors:Swainsbury, D.J.K, Hawkings, F.R, Martin, E.C, Musial, S, Salisbury, J.H, Jackson, P.J, Farmer, D.A, Johnson, M.P, Siebert, C.A, Hitchcock, A, Hunter, C.N.
Deposit date:2022-08-19
Release date:2023-03-15
Last modified:2023-03-22
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Cryo-EM structure of the four-subunit Rhodobacter sphaeroides cytochrome bc 1 complex in styrene maleic acid nanodiscs.
Proc.Natl.Acad.Sci.USA, 120, 2023
8ASI
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BU of 8asi by Molmil
Four subunit cytochrome b-c1 complex from Rhodobacter sphaeroides in native nanodiscs - consensus refinement in the b-b conformation
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Cytochrome b, Cytochrome b-c1 subunit IV, ...
Authors:Swainsbury, D.J.K, Hawkings, F.R, Martin, E.C, Musial, S, Salisbury, J.H, Jackson, P.J, Farmer, D.A, Johnson, M.P, Siebert, C.A, Hitchcock, A, Hunter, C.N.
Deposit date:2022-08-19
Release date:2023-03-15
Last modified:2023-03-22
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structure of the four-subunit Rhodobacter sphaeroides cytochrome bc 1 complex in styrene maleic acid nanodiscs.
Proc.Natl.Acad.Sci.USA, 120, 2023
7U5M
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BU of 7u5m by Molmil
Cryo-EM Structure of GAPDH
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Morgan, C.E, Zhang, Z, Yu, E.W.
Deposit date:2022-03-02
Release date:2022-12-14
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.28 Å)
Cite:Toward structural-omics of the bovine retinal pigment epithelium.
Cell Rep, 41, 2022
8FN2
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BU of 8fn2 by Molmil
The structure of a 50S ribosomal subunit in the Lyme disease pathogen Borreliella burgdorferi
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ...
Authors:Sharma, M.R, Manjari, S.R, Agrawal, E.K, Keshavan, P, Koripella, R.K, Majumdar, S, Marcinkiewicz, A.L, Lin, Y.P, Agrawal, R.K, Banavali, N.K.
Deposit date:2022-12-26
Release date:2023-11-08
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The structure of a hibernating ribosome in a Lyme disease pathogen.
Nat Commun, 14, 2023
2GHD
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BU of 2ghd by Molmil
Conformational mobility in the active site of a heme peroxidase
Descriptor: CYANIDE ION, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
Authors:Badyal, S.K, Joyce, M.G, Sharp, K.H, Raven, E.L, Moody, P.C.E.
Deposit date:2006-03-27
Release date:2006-06-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Conformational Mobility in the Active Site of a Heme Peroxidase.
J.Biol.Chem., 281, 2006
7U5K
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BU of 7u5k by Molmil
Cryo-EM Structure of DPYSL2
Descriptor: Dihydropyrimidinase-related protein 2
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2022-03-02
Release date:2022-12-14
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Toward structural-omics of the bovine retinal pigment epithelium.
Cell Rep, 41, 2022
3LAL
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BU of 3lal by Molmil
Crystal structure of HIV-1 reverse transcriptase in complex with N1-ethyl pyrimidinedione non-nucleoside inhibitor
Descriptor: 3-{[3-ethyl-5-(1-methylethyl)-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl]carbonyl}-5-methylbenzonitrile, HIV Reverse transcriptase, SULFATE ION
Authors:Lansdon, E.B, Mitchell, M.L.
Deposit date:2010-01-06
Release date:2010-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:N1-Alkyl pyrimidinediones as non-nucleoside inhibitors of HIV-1 reverse transcriptase.
Bioorg.Med.Chem.Lett., 20, 2010
4X2H
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BU of 4x2h by Molmil
Sac3N peptide bound to Mex67:Mtr2
Descriptor: Putative mRNA export protein, Putative uncharacterized protein, SER-SER-VAL-PHE-GLY-ALA-PRO-ALA
Authors:Aibara, S, Valkov, E, Stewart, M.
Deposit date:2014-11-26
Release date:2015-06-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Characterization of the Chaetomium thermophilum TREX-2 Complex and its Interaction with the mRNA Nuclear Export Factor Mex67:Mtr2.
Structure, 23, 2015
6P4T
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BU of 6p4t by Molmil
Salmonella typhi PltB Homopentamer T65I Mutant with Neu5Ac-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans
Descriptor: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Putative pertussis-like toxin subunit
Authors:Nguyen, T, Milano, S.K, Hillpot, E.C, Yang, Y.A, Song, J.
Deposit date:2019-05-28
Release date:2020-03-25
Last modified:2020-08-05
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Salmonella Typhoid Toxin PltB Subunit and Its Non-typhoidal Salmonella Ortholog Confer Differential Host Adaptation and Virulence.
Cell Host Microbe, 27, 2020
6R7X
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BU of 6r7x by Molmil
CryoEM structure of calcium-bound human TMEM16K / Anoctamin 10 in detergent (2mM Ca2+, closed form)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Anoctamin-10, CALCIUM ION, ...
Authors:Pike, A.C.W, Bushell, S.R, Shintre, C.A, Tessitore, A, Baronina, A, Chu, A, Mukhopadhyay, S, Shrestha, L, Chalk, R, Burgess-Brown, N.A, Love, J, Huiskonen, J.T, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
Deposit date:2019-03-29
Release date:2019-05-01
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:The structural basis of lipid scrambling and inactivation in the endoplasmic reticulum scramblase TMEM16K.
Nat Commun, 10, 2019
6P4M
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BU of 6p4m by Molmil
Salmonella typhi PltB Homopentamer with Neu5Ac-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans
Descriptor: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Putative pertussis-like toxin subunit
Authors:Nguyen, T, Milano, S.K, Hillpot, E.C, Yang, Y.A, Song, J.
Deposit date:2019-05-28
Release date:2020-03-25
Last modified:2020-08-05
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Salmonella Typhoid Toxin PltB Subunit and Its Non-typhoidal Salmonella Ortholog Confer Differential Host Adaptation and Virulence.
Cell Host Microbe, 27, 2020
4EJH
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BU of 4ejh by Molmil
Human Cytochrome P450 2A13 in complex with 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone (NNK)
Descriptor: 4-[methyl(nitroso)amino]-1-(pyridin-3-yl)butan-1-one, Cytochrome P450 2A13, GLYCEROL, ...
Authors:DeVore, N.M, Scott, E.E.
Deposit date:2012-04-06
Release date:2012-06-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Nicotine and 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone binding and access channel in human cytochrome P450 2A6 and 2A13 enzymes.
J.Biol.Chem., 287, 2012
6P4R
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BU of 6p4r by Molmil
Salmonella typhi PltB Homopentamer N29K Mutant with Neu5Ac-alpha-2-6-Gal-beta-1-4-GlcNAc glycans
Descriptor: N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Putative pertussis-like toxin subunit
Authors:Nguyen, T, Milano, S.K, Hillpot, E.C, Yang, Y.A, Song, J.
Deposit date:2019-05-28
Release date:2020-03-25
Last modified:2020-08-05
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Salmonella Typhoid Toxin PltB Subunit and Its Non-typhoidal Salmonella Ortholog Confer Differential Host Adaptation and Virulence.
Cell Host Microbe, 27, 2020
3LRX
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BU of 3lrx by Molmil
Crystal Structure of the C-terminal domain (residues 78-226) of PF1911 hydrogenase from Pyrococcus furiosus, Northeast Structural Genomics Consortium Target PfR246A
Descriptor: Putative hydrogenase
Authors:Forouhar, F, Abashidze, M, Seetharaman, J, Mao, M, Xiao, R, Ciccosanti, C, Foote, E.L, Belote, R.L, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-02-11
Release date:2010-03-16
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Northeast Structural Genomics Consortium Target PfR246A
To be Published

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數據於2024-10-09公開中

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