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PDB: 41371 results

8DYH
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IL17A homodimer bound to Compound 6
Descriptor: (5P)-N-benzyl-6-chloro-5-(quinolin-5-yl)pyridin-3-amine, GLYCEROL, Interleukin-17A
Authors:Argiriadi, M.A, Goedken, E.R.
Deposit date:2022-08-04
Release date:2022-09-07
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Identification and structure-based drug design of cell-active inhibitors of interleukin 17A at a novel C-terminal site.
Sci Rep, 12, 2022
8K7C
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BU of 8k7c by Molmil
Outward-facing structure of human ABCB6 W546A mutant (ADP/VO4-bound)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-binding cassette sub-family B member 6, MAGNESIUM ION, ...
Authors:Jin, M.S, Lee, S.S, Park, J.G, Jang, E, Choi, S.H, Kim, S, Kim, J.W.
Deposit date:2023-07-26
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:W546 stacking disruption traps the human porphyrin transporter ABCB6 in an outward-facing transient state.
Commun Biol, 6, 2023
8DYI
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BU of 8dyi by Molmil
IL17A homodimer bound to Compound 5
Descriptor: (5P)-5-[5-(benzylamino)pyridin-3-yl]-N-[2-(morpholin-4-yl)ethyl]-1H-indazol-3-amine, Interleukin-17A
Authors:Argiriadi, M.A, Goedken, E.R.
Deposit date:2022-08-04
Release date:2022-09-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Identification and structure-based drug design of cell-active inhibitors of interleukin 17A at a novel C-terminal site.
Sci Rep, 12, 2022
6XKN
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BU of 6xkn by Molmil
Class III PreQ1 riboswitch mutant A52G
Descriptor: 7-DEAZA-7-AMINOMETHYL-GUANINE, Class III PreQ1 riboswitch
Authors:Srivastava, K.Y, Jenkins, J.L, Wedekind, J.E.
Deposit date:2020-06-26
Release date:2021-12-29
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:New insights into Class III PreQ1 metabolite binding
To Be Published
4YA3
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BU of 4ya3 by Molmil
Yeast 20S proteasome beta2-H116N mutant in complex with Ac-PAE-ep
Descriptor: Ac-PAE-ep, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Huber, E.M, Groll, M.
Deposit date:2015-02-17
Release date:2015-06-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Systematic Analyses of Substrate Preferences of 20S Proteasomes Using Peptidic Epoxyketone Inhibitors.
J.Am.Chem.Soc., 137, 2015
8YR2
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BU of 8yr2 by Molmil
Structure of NET-Nisoxetine in outward-open state
Descriptor: CHLORIDE ION, CHOLESTEROL, SODIUM ION, ...
Authors:Zhang, H, Xu, E.H, Jiang, Y.
Deposit date:2024-03-20
Release date:2024-05-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Dimerization and antidepressant recognition at noradrenaline transporter.
Nature, 630, 2024
6AY1
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BU of 6ay1 by Molmil
Crystal structure of a nucleoside diphosphate kinase NDK from Helicobacter pylori
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, HEXANE-1,6-DIOL, ISOPROPYL ALCOHOL, ...
Authors:Edwards, T.E, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-09-07
Release date:2017-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of a nucleoside diphosphate kinase NDK from Helicobacter pylori
To be Published
4Y8R
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BU of 4y8r by Molmil
Yeast 20S proteasome beta2-H116D mutant
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Huber, E.M, Groll, M.
Deposit date:2015-02-16
Release date:2015-06-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Systematic Analyses of Substrate Preferences of 20S Proteasomes Using Peptidic Epoxyketone Inhibitors.
J.Am.Chem.Soc., 137, 2015
8K7B
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BU of 8k7b by Molmil
post-occluded structure of human ABCB6 W546A mutant (ADP/VO4-bound)
Descriptor: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, ADP ORTHOVANADATE, ATP-binding cassette sub-family B member 6, ...
Authors:Jin, M.S, Lee, S.S, Park, J.G, Jang, E, Choi, S.H, Kim, S, Kim, J.W.
Deposit date:2023-07-26
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:W546 stacking disruption traps the human porphyrin transporter ABCB6 in an outward-facing transient state.
Commun Biol, 6, 2023
8DYF
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BU of 8dyf by Molmil
IL17A homodimer bound to Compound 10
Descriptor: (5M)-3-[({2-[2-(2-{2-[2-({[(5M)-3-carboxy-5-(5,8-dihydroquinolin-4-yl)phenyl]amino}methyl)phenoxy]ethoxy}ethoxy)ethoxy]phenyl}methyl)amino]-5-(quinolin-4-yl)benzoic acid, Interleukin-17A
Authors:Argiriadi, M.A, Goedken, E.R.
Deposit date:2022-08-04
Release date:2022-09-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Identification and structure-based drug design of cell-active inhibitors of interleukin 17A at a novel C-terminal site.
Sci Rep, 12, 2022
8TJS
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BU of 8tjs by Molmil
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO GPZ6-a.01 FAB
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody GPZ6-a.01 Heavy Chain, ...
Authors:Morano, N.C, Becker, J.E, Shapiro, L.
Deposit date:2023-07-24
Release date:2024-07-31
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.31 Å)
Cite:CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO GPZ6-a.01 FAB
To Be Published
8Y92
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BU of 8y92 by Molmil
structure of NET-Atomoxetine in outward-open state
Descriptor: (3R)-N-methyl-3-(2-methylphenoxy)-3-phenyl-propan-1-amine, CHLORIDE ION, SODIUM ION, ...
Authors:Zhang, H, Xu, E.H, Jiang, Y.
Deposit date:2024-02-06
Release date:2024-05-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Dimerization and antidepressant recognition at noradrenaline transporter.
Nature, 630, 2024
8E1A
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BU of 8e1a by Molmil
Structure-based study to overcome cross-reactivity of novel androgen receptor inhibitors
Descriptor: 1,2-ETHANEDIOL, 4-[4-(3-fluoro-2-methoxyphenyl)-1,3-thiazol-2-yl]morpholine, Androgen receptor
Authors:Lallous, N, Li, H, Radaeva, M, Dalal, K, Leblanc, E, Ban, F, Ciesielski, F, Chow, B, Morin, M, Singh, K, Rennie, P.S, Cherkasov, A.
Deposit date:2022-08-10
Release date:2022-09-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure-Based Study to Overcome Cross-Reactivity of Novel Androgen Receptor Inhibitors.
Cells, 11, 2022
8TNJ
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BU of 8tnj by Molmil
Cryo-EM structure of HLA-B*73:01 bound to a 9mer peptide and two Fabs
Descriptor: 9mer peptide,Beta-2-microglobulin,MHC class I antigen chimera, B.1 Fab heavy chain, B.1 Fab light chain, ...
Authors:Ross, P, Adams, E.J, Lodwick, J, Zhao, M, Slezak, T, Kossiakoff, A.
Deposit date:2023-08-02
Release date:2024-08-14
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structure of HLA-B*73:01 bound to a 9mer peptide and two Fabs
To Be Published
8Y91
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BU of 8y91 by Molmil
Structure of NET-nomifensine in outward-open state
Descriptor: (4S)-2-methyl-4-phenyl-3,4-dihydro-1H-isoquinolin-8-amine, CHLORIDE ION, SODIUM ION, ...
Authors:Zhang, H, Xu, E.H, Jiang, Y.
Deposit date:2024-02-06
Release date:2024-05-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Dimerization and antidepressant recognition at noradrenaline transporter.
Nature, 630, 2024
5MXU
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BU of 5mxu by Molmil
Structure of the Y503F mutant of vanillyl alcohol oxidase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, Vanillyl-alcohol oxidase
Authors:Ewing, T.A, Nguyen, Q.-T, Allan, R.C, Gygli, G, Romero, E, Binda, C, Fraaije, M.W, Mattevi, A, van Berkel, W.J.H.
Deposit date:2017-01-24
Release date:2017-07-26
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Two tyrosine residues, Tyr-108 and Tyr-503, are responsible for the deprotonation of phenolic substrates in vanillyl-alcohol oxidase.
J. Biol. Chem., 292, 2017
6S2I
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BU of 6s2i by Molmil
Anti-tumor antibody 14F7-derived scFv in complex with NeuGc Gm3
Descriptor: N-glycolyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, scFv C1
Authors:Bjerregaard-Andersen, K, Heggelund, J.E, Krengel, U.
Deposit date:2019-06-20
Release date:2020-07-15
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.285 Å)
Cite:Key role of a structural water molecule for the specificity of 14F7-An antitumor antibody targeting the NeuGc GM3 ganglioside.
Glycobiology, 31, 2021
5MSK
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BU of 5msk by Molmil
Mouse PA28beta
Descriptor: Proteasome activator complex subunit 2
Authors:Huber, E.M, Groll, M.
Deposit date:2017-01-05
Release date:2017-09-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The Mammalian Proteasome Activator PA28 Forms an Asymmetric alpha 4 beta 3 Complex.
Structure, 25, 2017
5MYI
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BU of 5myi by Molmil
Convergent evolution involving dimeric and trimeric dUTPases in signalling.
Descriptor: CALCIUM ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Donderis, J, Bowring, J, Maiques, E, Ciges-Tomas, J.R, Alite, C, Mehmedov, I, Tormo-Mas, M.A, Penades, J.R, Marina, A.
Deposit date:2017-01-26
Release date:2017-09-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Convergent evolution involving dimeric and trimeric dUTPases in pathogenicity island mobilization.
PLoS Pathog., 13, 2017
8E1F
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BU of 8e1f by Molmil
Sterile Alpha Motif Domain of Human Translocation ETS Leukemia, Non-Polymer Crystal Form
Descriptor: CHLORIDE ION, MAGNESIUM ION, SULFATE ION, ...
Authors:Wilson, E, Nawarathnage, S, Stewart, C, Brown, S, Bezzant, B, Bunn, D, Towne, N, Pedroza Romo, M.J, Moody, J.D.
Deposit date:2022-08-10
Release date:2022-09-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Sterile Alpha Motif Domain of Human Translocation ETS Leukemia, Non-Polymer Crystal Form
To Be Published
8ACT
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BU of 8act by Molmil
structure of the human beta-cardiac myosin folded-back off state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Myosin light chain 3, ...
Authors:Grinzato, A, Kandiah, E, Robert-Paganin, J, Auguin, D, Kikuti, C, Nandwani, N, Moussaoui, D, Pathak, D, Ruppel, K.M, Spudich, J.A, Houdusse, A.
Deposit date:2022-07-06
Release date:2023-06-07
Last modified:2023-08-30
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of the folded-back state of human beta-cardiac myosin.
Nat Commun, 14, 2023
8TK3
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BU of 8tk3 by Molmil
HUMAN VH1-RELATED DUAL-SPECIFICITY PHOSPHATASE (VHR) having oxidized catalytic cysteine and complexed with 6-(difluoromethyl)pyrimidin-4-ol at two allosteric sites
Descriptor: 6-(difluoromethyl)pyrimidin-4-ol, DIMETHYL SULFOXIDE, Dual specificity protein phosphatase 3
Authors:Aleshin, A.E, Wu, J, Lambert, L.J, Cosford, N.D.P, Tautz, L.
Deposit date:2023-07-25
Release date:2024-08-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:HUMAN VH1-RELATED DUAL-SPECIFICITY PHOSPHATASE (VHR) having oxidized catalytic cysteine and complexed with 6-(difluoromethyl)pyrimidin-4-ol at two allosteric sites
To Be Published
5M7K
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BU of 5m7k by Molmil
Blastochloris viridis photosynthetic reaction center - RC_vir_xfel
Descriptor: (2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-OCTAMETHYLDOTRIACONTA-2,6,10,14,18,22,26,30-OCTAENYL TRIHYDROGEN DIPHOSPHATE, 15-cis-1,2-dihydroneurosporene, BACTERIOCHLOROPHYLL A, ...
Authors:Sharma, A.S, Johansson, L, Dunevall, E, Wahlgren, W.Y, Neutze, R, Katona, G.
Deposit date:2016-10-28
Release date:2017-02-08
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Asymmetry in serial femtosecond crystallography data.
Acta Crystallogr A Found Adv, 73, 2017
5M80
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BU of 5m80 by Molmil
Translation initiation factor 4E in complex with (RP)-iPr-m7GppSpG mRNA 5' cap analog
Descriptor: Eukaryotic translation initiation factor 4E, GLYCEROL, [[[(3~{a}~{R},4~{R},6~{R},6~{a}~{R})-4-(2-azanyl-7-methyl-6-oxidanylidene-1~{H}-purin-7-ium-9-yl)-2,2-dimethyl-3~{a},4,6,6~{a}-tetrahydrofuro[3,4-d][1,3]dioxol-6-yl]methoxy-oxidanyl-phosphoryl]oxy-sulfanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-3~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Authors:Warminski, M, Nowak, E, Kowalska, J, Jemielity, J, Nowotny, M.
Deposit date:2016-10-28
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Translation initiation factor 4E in complex with (RP)-iPr-m7GppSpG mRNA 5' cap analog
To Be Published
6S5U
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BU of 6s5u by Molmil
Strictosidine Synthase from Ophiorrhiza pumila in complex with N-[2-(1H-Indol-3-yl)ethyl]-3-methyl-1-butanamine
Descriptor: Strictosidine synthase, ~{N}-[2-(1~{H}-indol-3-yl)ethyl]-3-methyl-butan-1-amine
Authors:Eger, E, Sharma, M, Kroutil, W, Grogan, G.
Deposit date:2019-07-02
Release date:2020-04-08
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Inverted Binding of Non-natural Substrates in Strictosidine Synthase Leads to a Switch of Stereochemical Outcome in Enzyme-Catalyzed Pictet-Spengler Reactions.
J.Am.Chem.Soc., 142, 2020

227344

數據於2024-11-13公開中

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