Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 40736 results

4V0L
DownloadVisualize
BU of 4v0l by Molmil
Crystal structure of the CrARL6DN in the GTP bound form
Descriptor: ARF-LIKE SMALL GTPASE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Mourao, A, Lorentzen, E.
Deposit date:2014-09-17
Release date:2014-11-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.197 Å)
Cite:Structural Basis for Membrane Targeting of the Bbsome by Arl6
Nat.Struct.Mol.Biol., 21, 2014
7MDO
DownloadVisualize
BU of 7mdo by Molmil
Structure of human p97 ATPase L464P mutant
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
Authors:Zhang, X, Gui, L, Li, S, Nandi, P, Columbres, R.C, Wong, D.E, Moen, D.R, Lin, H.J, Chiu, P.-L, Chou, T.-F.
Deposit date:2021-04-05
Release date:2021-08-25
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4.12 Å)
Cite:Conserved L464 in p97 D1-D2 linker is critical for p97 cofactor regulated ATPase activity.
Biochem.J., 478, 2021
4W8Y
DownloadVisualize
BU of 4w8y by Molmil
Structure of full length Cmr2 from Pyrococcus furiosus (Manganese bound form)
Descriptor: CRISPR system Cmr subunit Cmr2, MANGANESE (II) ION, ZINC ION
Authors:Benda, C, Ebert, J, Baumgaertner, M, Conti, E.
Deposit date:2014-08-26
Release date:2014-10-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Model of a CRISPR RNA-Silencing Complex Reveals the RNA-Target Cleavage Activity in Cmr4.
Mol.Cell, 56, 2014
7MDM
DownloadVisualize
BU of 7mdm by Molmil
Structure of human p97 ATPase L464P mutant
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
Authors:Zhang, X, Gui, L, Li, S, Nandi, P, Columbres, R.C, Wong, D.E, Moen, D.R, Lin, H.J, Chiu, P.-L, Chou, T.-F.
Deposit date:2021-04-05
Release date:2021-08-25
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4.86 Å)
Cite:Conserved L464 in p97 D1-D2 linker is critical for p97 cofactor regulated ATPase activity.
Biochem.J., 478, 2021
6E1X
DownloadVisualize
BU of 6e1x by Molmil
Crystal structure of product-bound complex of spermidine/spermine N-acetyltransferase SpeG
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Filippova, E.V, Minasov, G, Kiryukhina, O, Anderson, W.F, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-07-10
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of product-bound complex of spermidine/spermine N-acetyltransferase SpeG from Vibrio cholerae.
To Be Published
7MDZ
DownloadVisualize
BU of 7mdz by Molmil
80S rabbit ribosome stalled with benzamide-CHX
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S21, ...
Authors:Koga, Y, Hoang, E.M, Park, Y, Keszei, A.F.A, Murray, J, Shao, S, Liau, B.B.
Deposit date:2021-04-06
Release date:2021-09-01
Last modified:2021-09-15
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Discovery of C13-Aminobenzoyl Cycloheximide Derivatives that Potently Inhibit Translation Elongation.
J.Am.Chem.Soc., 143, 2021
1UPX
DownloadVisualize
BU of 1upx by Molmil
The crystal structure of the Hybrid Cluster Protein from Desulfovibrio desulfuricans containing molecules in the oxidized and reduced states.
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FE4-S3 CLUSTER, HYDROXYLAMINE REDUCTASE, ...
Authors:Aragao, D, Macedo, S, Mitchell, E.P, Lindley, P.F.
Deposit date:2003-10-14
Release date:2003-12-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structure of the Hybrid Cluster Protein (Hcp) from Desulfovibrio Desulfuricans Atcc 27774 Containing Molecules in the Oxidized and Reduced States
Acta Crystallogr.,Sect.D, 59, 2003
5I1S
DownloadVisualize
BU of 5i1s by Molmil
Villin headpiece subdomain with a Lys30 to APC substitution
Descriptor: D-Villin headpiece subdomain, Villin-1
Authors:Kreitler, D.F, Mortenson, D.E, Gellman, S.H, Forest, K.T.
Deposit date:2016-02-05
Release date:2016-05-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Effects of Single alpha-to-beta Residue Replacements on Structure and Stability in a Small Protein: Insights from Quasiracemic Crystallization.
J.Am.Chem.Soc., 138, 2016
4WBH
DownloadVisualize
BU of 4wbh by Molmil
STRUCTURE OF THE WNT DEACYLASE NOTUM - CRYSTAL FORM I APO - 2.2A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Protein notum homolog, ...
Authors:Zebisch, M, Jones, E.Y.
Deposit date:2014-09-03
Release date:2015-02-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Notum deacylates Wnt proteins to suppress signalling activity
Nature, 519, 2015
4NBY
DownloadVisualize
BU of 4nby by Molmil
Crystal Structure of TcdA-A2 Bound to Two Molecules of A20.1 VHH
Descriptor: A20.1 VHH, Cell wall-binding repeat protein
Authors:Murase, T, Eugenio, L, Schorr, M, Hussack, G, Tanha, J, Kitova, E, Klassen, J.S, Ng, K.K.S.
Deposit date:2013-10-23
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural Basis for Antibody Recognition in the Receptor-binding Domains of Toxins A and B from Clostridium difficile.
J.Biol.Chem., 289, 2014
4WD0
DownloadVisualize
BU of 4wd0 by Molmil
Crystal structure of HisAp form Arthrobacter aurescens
Descriptor: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
Authors:MICHALSKA, K, VERDUZCO-CASTRO, E.A, ENDRES, M, BARONA-GOMEZ, F, JOACHIMIAK, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-09-05
Release date:2014-09-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of HisAp form Arthrobacter aurescens
To Be Published
6DZW
DownloadVisualize
BU of 6dzw by Molmil
Cryo-EM structure of the ts2-inactive human serotonin transporter in complex with paroxetine and 15B8 Fab and 8B6 ScFv
Descriptor: 15B8 antibody heavy chain, 15B8 antibody light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Coleman, J.A, Yang, D, Gouaux, E.
Deposit date:2018-07-05
Release date:2019-04-24
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Serotonin transporter-ibogaine complexes illuminate mechanisms of inhibition and transport.
Nature, 569, 2019
4NXJ
DownloadVisualize
BU of 4nxj by Molmil
Crystal Structure of PF3D7_1475600, a bromodomain from Plasmodium Falciparum
Descriptor: Bromodomain protein
Authors:Wernimont, A.K, Loppnau, P, Knapp, S, Fonseca, M, Brennan, P.E, Dong, A, Walker, J.R, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Hui, R, Hutchinson, A, Structural Genomics Consortium (SGC)
Deposit date:2013-12-09
Release date:2014-03-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Crystal Structure of PF3D7_1475600, a bromodomain from Plasmodium Falciparum
TO BE PUBLISHED
4NDV
DownloadVisualize
BU of 4ndv by Molmil
Crystal structure of L. decastes alpha-galactosyl-binding lectin in complex with globotriose
Descriptor: Alpha-galactosyl-binding lectin, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Van Eerde, A, Grahn, E, Krengel, U.
Deposit date:2013-10-27
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Atomic-resolution structure of the alpha-galactosyl binding Lyophyllum decastes lectin reveals a new protein family found in both fungi and plants.
Glycobiology, 25, 2015
4NC1
DownloadVisualize
BU of 4nc1 by Molmil
Crystal Structure of TcdA-A2 Bound to A20.1 VHH and A26.8 VHH
Descriptor: A20.1 VHH, A26.8 VHH, Cell wall-binding repeat protein
Authors:Murase, T, Eugenio, L, Schorr, M, Hussack, G, Tanha, J, Kitova, E.N, Klassen, J.S, Ng, K.K.S.
Deposit date:2013-10-23
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural Basis for Antibody Recognition in the Receptor-binding Domains of Toxins A and B from Clostridium difficile.
J.Biol.Chem., 289, 2014
5I7Z
DownloadVisualize
BU of 5i7z by Molmil
Crystal structure of a Par-6 PDZ-Crumbs 3 C-terminal peptide complex
Descriptor: Crb-3, DI(HYDROXYETHYL)ETHER, LD29223p
Authors:Whitney, D.S, Peterson, F.C, Prehoda, K.E, Volkman, B.F.
Deposit date:2016-02-18
Release date:2016-03-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Binding of Crumbs to the Par-6 CRIB-PDZ Module Is Regulated by Cdc42.
Biochemistry, 55, 2016
1V0R
DownloadVisualize
BU of 1v0r by Molmil
Tungstate-inhibited phospholipase D from Streptomyces sp. strain PMF
Descriptor: PHOSPHOLIPASE D, TUNGSTATE(VI) ION
Authors:Leiros, I, McSweeney, S, Hough, E.
Deposit date:2004-04-01
Release date:2004-06-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Reaction Mechanism of Phospholipase D from Streptomyces Sp. Strain Pmf. Snapshots Along the Reaction Pathway Reveal a Pentacoordinate Reaction Intermediate and an Unexpected Final Product
J.Mol.Biol., 339, 2004
1V9C
DownloadVisualize
BU of 1v9c by Molmil
Crystal Analysis of Precorrin-8x Methyl Mutase from Thermus Thermophilus
Descriptor: CHLORIDE ION, Precorrin-8x Methyl Mutase, SULFATE ION
Authors:Inagaki, E, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-23
Release date:2004-02-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Analysis of Precorrin-8x Methyl Mutase from Thermus Thermophilus
To be published
7MLU
DownloadVisualize
BU of 7mlu by Molmil
Cryo-EM reveals partially and fully assembled native glycine receptors,homomeric pentamer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3D1 Fab Heavy Chain, 3D1 Fab Light Chain, ...
Authors:Zhu, H, Gouaux, E.
Deposit date:2021-04-29
Release date:2021-09-29
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Architecture and assembly mechanism of native glycine receptors.
Nature, 599, 2021
6E0L
DownloadVisualize
BU of 6e0l by Molmil
Structure of Rhodothermus marinus CdnE c-UMP-AMP synthase with Apcpp and Upnpp
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION, ...
Authors:Eaglesham, J.B, Whiteley, A.T, de Oliveira Mann, C.C, Morehouse, B.R, Nieminen, E.A, King, D.S, Lee, A.S.Y, Mekalanos, J.J, Kranzusch, P.J.
Deposit date:2018-07-06
Release date:2019-02-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Bacterial cGAS-like enzymes synthesize diverse nucleotide signals.
Nature, 567, 2019
1V1K
DownloadVisualize
BU of 1v1k by Molmil
CDK2 IN COMPLEX WITH A DISUBSTITUTED 4, 6-BIS ANILINO PYRIMIDINE CDK4 INHIBITOR
Descriptor: (2R)-1-(DIMETHYLAMINO)-3-{4-[(6-{[2-FLUORO-5-(TRIFLUOROMETHYL)PHENYL]AMINO}PYRIMIDIN-4-YL)AMINO]PHENOXY}PROPAN-2-OL, CELL DIVISION PROTEIN KINASE 2
Authors:Beattie, J.F, Breault, G.A, Ellston, R.P.A, Green, S, Jewsbury, P.J, Midgley, C.J, Naven, R.T, Minshull, C.A, Pauptit, R.A, Tucker, J.A, Pease, J.E.
Deposit date:2004-04-16
Release date:2004-05-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Cyclin-Dependent Kinase 4 Inhibitors as a Treatment for Cancer. Part 1: Identification and Optimisation of Substituted 4,6-Bis Anilino Pyrimidines
Bioorg.Med.Chem.Lett., 13, 2003
4NKH
DownloadVisualize
BU of 4nkh by Molmil
Crystal structure of SspH1 LRR domain
Descriptor: E3 ubiquitin-protein ligase sspH1
Authors:Keszei, A.F.A, Xiaojing, T, Mccormick, C, Zeqiraj, E, Rohde, J.R, Tyers, M, Sicheri, F.
Deposit date:2013-11-12
Release date:2013-12-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure of an SspH1-PKN1 Complex Reveals the Basis for Host Substrate Recognition and Mechanism of Activation for a Bacterial E3 Ubiquitin Ligase.
Mol.Cell.Biol., 34, 2014
6U9K
DownloadVisualize
BU of 6u9k by Molmil
MLL1 SET N3861I/Q3867L bound to inhibitor 18 (TC-5153)
Descriptor: 5'-([(3S)-3-amino-3-carboxypropyl]{[1-(3,3-diphenylpropyl)azetidin-3-yl]methyl}amino)-5'-deoxyadenosine, GLYCEROL, Histone-lysine N-methyltransferase, ...
Authors:Petrunak, E.M, Stuckey, J.A.
Deposit date:2019-09-09
Release date:2020-07-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of Potent Small-Molecule Inhibitors of MLL Methyltransferase.
Acs Med.Chem.Lett., 11, 2020
6UDJ
DownloadVisualize
BU of 6udj by Molmil
HIV-1 bNAb 1-18 in complex with BG505 SOSIP.664 and 10-1074
Descriptor: 1-18 Fab Heavy Chain, 1-18 Fab Light Chain, 10-1074 Fab Heavy Chain, ...
Authors:Abernathy, M.E, Barnes, C.O, Gristick, H.B, Bjorkman, P.J.
Deposit date:2019-09-19
Release date:2020-01-29
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Restriction of HIV-1 Escape by a Highly Broad and Potent Neutralizing Antibody.
Cell, 180, 2020
6UDK
DownloadVisualize
BU of 6udk by Molmil
HIV-1 bNAb 1-55 in complex with modified BG505 SOSIP-based immunogen RC1 and 10-1074
Descriptor: 1-55 Fab Heavy Chain, 1-55 Fab Light Chain, 10-1074 Fab Heavy Chain, ...
Authors:Abernathy, M.E, Barnes, C.O, Gristick, H.B, Bjorkman, P.J.
Deposit date:2019-09-19
Release date:2020-01-29
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Restriction of HIV-1 Escape by a Highly Broad and Potent Neutralizing Antibody.
Cell, 180, 2020

223166

数据于2024-07-31公开中

PDB statisticsPDBj update infoContact PDBjnumon