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PDB: 41322 件

2OYQ
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Crystal structure of RB69 gp43 in complex with DNA with 5-NIMP opposite an abasic site analog
分子名称: 1-{2-DEOXY-5-O-[(R)-HYDROXY{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}PHOSPHORYL]-BETA-D-ERYTHRO-PENTOFURANOSYL}-5-NITRO -1H-INDOLE, DNA polymerase, MAGNESIUM ION, ...
著者Zahn, K.E, Belrhali, H, Wallace, S.S, Doublie, S.
登録日2007-02-22
公開日2007-10-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Caught bending the a-rule: crystal structures of translesion DNA synthesis with a non-natural nucleotide.
Biochemistry, 46, 2007
1K4R
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Structure of Dengue Virus
分子名称: MAJOR ENVELOPE PROTEIN E
著者Kuhn, R.J, Zhang, W, Rossmann, M.G, Pletnev, S.V, Corver, J, Lenches, E, Jones, C.T, Mukhopadhyay, S, Chipman, P.R, Strauss, E.G, Baker, T.S, Strauss, J.H.
登録日2001-10-08
公開日2002-03-13
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (24 Å)
主引用文献Structure of dengue virus: implications for flavivirus organization, maturation, and fusion.
Cell(Cambridge,Mass.), 108, 2002
4UW2
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Crystal structure of Csm1 in T.onnurineus
分子名称: CSM1
著者Jung, T.Y, An, Y, Park, K.H, Lee, M.H, Oh, B.H, Woo, E.J.
登録日2014-08-08
公開日2015-03-25
最終更新日2015-09-23
実験手法X-RAY DIFFRACTION (2.632 Å)
主引用文献Crystal Structure of the Csm1 Subunit of the Csm Complex and its Single-Stranded DNA-Specific Nuclease Activity.
Structure, 23, 2015
4UZL
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STRUCTURE OF THE WNT DEACYLASE NOTUM - CRYSTAL FORM I MYRISTOLEATE COMPLEX - 2.1A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Myristoleic acid, PROTEIN NOTUM HOMOLOG
著者Zebisch, M, Jones, E.Y.
登録日2014-09-05
公開日2015-02-25
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Notum Deacylates Wnt Proteins to Suppress Signalling Activity.
Nature, 519, 2015
6ZJ8
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Structure of the PAS domain from Bordetella pertussis BvgS
分子名称: Virulence sensor protein BvgS
著者Clantin, B, Dupre, E, Jacob-Dubuisson, F, Villeret, V.
登録日2020-06-28
公開日2020-11-11
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural insight into the role of the PAS domainfor signal transduction in sensor-kinase BvgS.
J.Bacteriol., 203, 2021
6ES2
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Structure of CDX2-DNA(CAA)
分子名称: DNA (5'-D(P*GP*GP*AP*GP*GP*CP*AP*AP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3'), DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*TP*TP*GP*CP*CP*TP*CP*C)-3'), Homeobox protein CDX-2
著者Morgunova, E, Yin, Y, Jolma, A, Popov, A, Taipale, J.
登録日2017-10-19
公開日2018-03-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Two distinct DNA sequences recognized by transcription factors represent enthalpy and entropy optima.
Elife, 7, 2018
4V6K
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Structural insights into cognate vs. near-cognate discrimination during decoding.
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Agirrezabala, X, Schreiner, E, Trabuco, L.G, Lei, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J.
登録日2011-01-07
公開日2014-07-09
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (8.25 Å)
主引用文献Structural insights into cognate versus near-cognate discrimination during decoding.
Embo J., 30, 2011
7O7G
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Crystal structure of the Shewanella oneidensis MR1 MtrC mutant H561M
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Edwards, M.J, van Wonderen, J.H, Newton-Payne, S.E, Butt, J.N, Clarke, T.A.
登録日2021-04-13
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Nanosecond heme-to-heme electron transfer rates in a multiheme cytochrome nanowire reported by a spectrally unique His/Met-ligated heme.
Proc.Natl.Acad.Sci.USA, 118, 2021
7NTS
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Crystal structure of the SARS-CoV-2 Main Protease with oxidized C145
分子名称: DIMETHYL SULFOXIDE, FORMIC ACID, GLYCEROL, ...
著者Dupre, E, Villeret, V, Hanoulle, X.
登録日2021-03-10
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.477 Å)
主引用文献NMR Spectroscopy of the Main Protease of SARS-CoV-2 and Fragment-Based Screening Identify Three Protein Hotspots and an Antiviral Fragment.
Angew.Chem.Int.Ed.Engl., 60, 2021
4WBX
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BU of 4wbx by Molmil
Conserved hypothetical protein PF1771 from Pyrococcus furiosus solved by sulfur SAD using Swiss Light Source data
分子名称: 2-keto acid:ferredoxin oxidoreductase subunit alpha
著者Weinert, T, Waltersperger, S, Olieric, V, Panepucci, E, Chen, L, Rose, J.P, Wang, M, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2014-09-04
公開日2014-12-10
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Fast native-SAD phasing for routine macromolecular structure determination.
Nat.Methods, 12, 2015
4V6L
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Structural insights into cognate vs. near-cognate discrimination during decoding.
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Agirrezabala, X, Schreiner, E, Trabuco, L.G, Lei, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J.
登録日2011-01-07
公開日2014-07-09
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (13.2 Å)
主引用文献Structural insights into cognate versus near-cognate discrimination during decoding.
Embo J., 30, 2011
4UZ7
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BU of 4uz7 by Molmil
STRUCTURE OF THE WNT DEACYLASE NOTUM - CRYSTAL FORM VI - 2.2A
分子名称: CHLORIDE ION, PROTEIN NOTUM HOMOLOG
著者Zebisch, M, Jones, E.Y.
登録日2014-09-04
公開日2015-02-25
最終更新日2015-03-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Notum Deacylates Wnt Proteins to Suppress Signalling Activity.
Nature, 519, 2015
8C7U
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Transcriptional pleiotropic repressor CodY from Enterococcus faecalis in complex with Leu and a 30-bp DNA fragment encompassing two overlapping binding sites
分子名称: DNA (29-MER), DNA (30-MER), GTP-sensing transcriptional pleiotropic repressor CodY, ...
著者Hainzl, T, Sauer-Eriksson, A.E.
登録日2023-01-17
公開日2023-06-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structural insights into CodY activation and DNA recognition.
Nucleic Acids Res., 51, 2023
5XOX
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Crystal structure of tRNA(His) guanylyltranserase from Saccharomyces cerevisiae
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Lee, K, Lee, E.H, Son, J, Hwang, K.Y.
登録日2017-05-31
公開日2017-07-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of tRNA(His) guanylyltransferase from Saccharomyces cerevisiae
Biochem. Biophys. Res. Commun., 490, 2017
2PE5
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BU of 2pe5 by Molmil
Crystal Structure of the Lac Repressor bound to ONPG in repressed state
分子名称: 2-nitrophenyl beta-D-galactopyranoside, DNA (5'-D(*DAP*DAP*DTP*DTP*DGP*DTP*DGP*DAP*DGP*DCP*DGP*DCP*DTP*DCP*DAP*DCP*DAP*DAP*DTP*DT)-3'), Lactose operon repressor
著者Daber, R, Stayrook, S.E, Rosenberg, A, Lewis, M.
登録日2007-04-02
公開日2008-03-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural analysis of lac repressor bound to allosteric effectors
J.Mol.Biol., 370, 2007
2P5G
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Crystal structure of RB69 gp43 in complex with DNA with dAMP opposite an abasic site analog in a 21mer template
分子名称: DNA polymerase, Primer DNA, Template DNA
著者Zahn, K.E, Belrhali, H, Wallace, S.S, Doublie, S.
登録日2007-03-15
公開日2007-10-23
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Caught bending the a-rule: crystal structures of translesion DNA synthesis with a non-natural nucleotide.
Biochemistry, 46, 2007
2DTZ
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BU of 2dtz by Molmil
Crystal Structure of multidrug binding protein QacR from Staphylococcus aureus cocrystallized with compound DB75
分子名称: HTH-type transcriptional regulator qacR, SULFATE ION
著者Brooks, B.E, Brennan, R.G.
登録日2006-07-19
公開日2007-07-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Multidrug-Binding Transcription Factor QacR Binds the Bivalent Aromatic Diamidines DB75 and DB359 in Multiple Positions
J.Am.Chem.Soc., 129, 2007
6YWL
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BU of 6ywl by Molmil
Crystal structure of SARS-CoV-2 (Covid-19) NSP3 macrodomain in complex with ADP-ribose
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5-DIPHOSPHORIBOSE, MAGNESIUM ION, ...
著者Schroeder, M, Ni, X, Olieric, V, Sharpe, E.M, Wojdyla, J.A, Wang, M, Knapp, S, Chaikuad, A, Structural Genomics Consortium (SGC)
登録日2020-04-29
公開日2020-05-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Insights into Plasticity and Discovery of Remdesivir Metabolite GS-441524 Binding in SARS-CoV-2 Macrodomain.
Acs Med.Chem.Lett., 12, 2021
5JCH
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BU of 5jch by Molmil
Crystal structure of chicken MDA5 with 5'p 10-mer dsRNA and ADP-Mg2+ at 2.95 A resolution (untwinned).
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Melanoma differentiation associated protein-5, ...
著者Cusack, S, Uchikawa, E.
登録日2016-04-15
公開日2016-06-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural Analysis of dsRNA Binding to Anti-viral Pattern Recognition Receptors LGP2 and MDA5.
Mol.Cell, 62, 2016
1K7H
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CRYSTAL STRUCTURE OF SHRIMP ALKALINE PHOSPHATASE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ALKALINE PHOSPHATASE, MALEIC ACID, ...
著者De Backer, M.E, Mc Sweeney, S, Rasmussen, H.B, Riise, B.W, Lindley, P, Hough, E.
登録日2001-10-19
公開日2002-07-31
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献The 1.9 A Crystal Structure of Heat-Labile Shrimp Alkaline Phosphatase
J.Mol.Biol., 318, 2002
5JFY
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Crystal structure of a plant cytidine deaminase
分子名称: ACETATE ION, CHLORIDE ION, Deoxycytidine deaminase, ...
著者Taylor, M.W, Lee, J.E.
登録日2016-04-19
公開日2017-04-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.101 Å)
主引用文献To be published
To Be Published
2D62
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Crystal structure of multiple sugar binding transport ATP-binding protein
分子名称: PYROPHOSPHATE 2-, SULFATE ION, multiple sugar-binding transport ATP-binding protein
著者Lokanath, N.K, Mizohata, E, Yamaguchi-Sihta, E, Chen, L, Liu, Z.J, Wang, B.C, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-11-08
公開日2006-05-08
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of multiple sugar binding transport ATP-binding protein
To be Published
5IU4
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Crystal structure of stabilized A2A adenosine receptor A2AR-StaR2-bRIL in complex with ZM241385 at 1.7A resolution
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, ...
著者Segala, E, Guo, D, Cheng, R.K.Y, Bortolato, A, Deflorian, F, Dore, A.S, Errey, J.C, Heitman, L.H, Ijzerman, A.P, Marshall, F.H, Cooke, R.M.
登録日2016-03-17
公開日2016-06-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Controlling the Dissociation of Ligands from the Adenosine A2A Receptor through Modulation of Salt Bridge Strength.
J.Med.Chem., 59, 2016
6ENM
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Crystal structure of MMP12 in complex with hydroxamate inhibitor LP168.
分子名称: 2-[2-[4-(4-methoxyphenyl)phenyl]sulfonylphenyl]-~{N}-oxidanyl-ethanamide, CALCIUM ION, Macrophage metalloelastase, ...
著者Vera, L, Nuti, E, Rossello, A, Stura, E.A.
登録日2017-10-05
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Development of Thioaryl-Based Matrix Metalloproteinase-12 Inhibitors with Alternative Zinc-Binding Groups: Synthesis, Potentiometric, NMR, and Crystallographic Studies.
J. Med. Chem., 61, 2018
5J02
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Structure of the lariat form of a chimeric derivative of the Oceanobacillus iheyensis group II intron in the presence of NH4+, MG2+ and an inactive 5' exon.
分子名称: 5' EXON ANALOG (5'-R(*CP*UP*GP*UP*UP*AP*(5MU))-3'), AMMONIUM ION, GROUP II INTRON LARIAT, ...
著者Costa, M, Walbott, H, Monachello, D, Westhof, E, Michel, F.
登録日2016-03-26
公開日2016-12-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.493 Å)
主引用文献Crystal structures of a group II intron lariat primed for reverse splicing.
Science, 354, 2016

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件を2024-11-06に公開中

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