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PDB: 40926 results

4EYZ
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Crystal structure of an uncommon cellulosome-related protein module from Ruminococcus flavefaciens that resembles papain-like cysteine peptidases
Descriptor: 1,2-ETHANEDIOL, Cellulosome-related protein module from Ruminococcus flavefaciens that resembles papain-like cysteine peptidases
Authors:Frolow, F, Voronov-Goldman, M, Bayer, E, Lamed, R.
Deposit date:2012-05-02
Release date:2013-03-20
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.383 Å)
Cite:Crystal Structure of an Uncommon Cellulosome-Related Protein Module from Ruminococcus flavefaciens That Resembles Papain-Like Cysteine Peptidases.
Plos One, 8, 2013
1HQD
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PSEUDOMONAS CEPACIA LIPASE COMPLEXED WITH TRANSITION STATE ANALOGUE OF 1-PHENOXY-2-ACETOXY BUTANE
Descriptor: (RP,SP)-O-(2R)-(1-PHENOXYBUT-2-YL)-METHYLPHOSPHONIC ACID CHLORIDE, CALCIUM ION, LIPASE
Authors:Luic, M, Tomic, S, Lescic, I, Ljubovic, E, Sepac, D, Sunjic, V, Vitale, L, Saenger, W, Kojic-Prodic, B.
Deposit date:2000-12-15
Release date:2001-08-22
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Complex of Burkholderia cepacia lipase with transition state analogue of 1-phenoxy-2-acetoxybutane: biocatalytic, structural and modelling study.
Eur.J.Biochem., 268, 2001
1I0S
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BU of 1i0s by Molmil
ARCHAEOGLOBUS FULGIDUS FERRIC REDUCTASE COMPLEX WITH NADP+
Descriptor: CONSERVED HYPOTHETICAL PROTEIN, FLAVIN MONONUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Chiu, H.-J, Johnson, E, Schroder, I, Rees, D.C.
Deposit date:2001-01-29
Release date:2001-05-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structures of a novel ferric reductase from the hyperthermophilic archaeon Archaeoglobus fulgidus and its complex with NADP+.
Structure, 9, 2001
1I0R
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BU of 1i0r by Molmil
CRYSTAL STRUCTURE OF FERRIC REDUCTASE FROM ARCHAEOGLOBUS FULGIDUS
Descriptor: CONSERVED HYPOTHETICAL PROTEIN, FLAVIN MONONUCLEOTIDE
Authors:Chiu, H.-J, Johnson, E, Schroder, I, Rees, D.C.
Deposit date:2001-01-29
Release date:2001-05-02
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of a novel ferric reductase from the hyperthermophilic archaeon Archaeoglobus fulgidus and its complex with NADP+.
Structure, 9, 2001
2FQT
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BU of 2fqt by Molmil
Crystal structure of B.subtilis LuxS in complex with (2S)-2-Amino-4-[(2R,3S)-2,3-dihydroxy-3-N-hydroxycarbamoyl-propylmercapto]butyric acid
Descriptor: (2S)-2-AMINO-4-[(2R,3S)-2,3-DIHYDROXY-3-N-HYDROXYCARBAMOYL-PROPYLMERCAPTO]BUTYRIC ACID, COBALT (II) ION, S-ribosylhomocysteine lyase, ...
Authors:Shen, G, Rajan, R, Zhu, J, Bell, C.E, Pei, D.
Deposit date:2006-01-18
Release date:2006-05-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Design and Synthesis of Substrate Analogue Inhibitors of S-Ribosylhomocysteinase (LuxS)
J.Med.Chem., 49, 2006
4F39
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Kainate bound to the ligand binding domain of GluA3
Descriptor: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, Glutamate receptor 3, ZINC ION
Authors:Ahmed, A.H, Oswald, R.E.
Deposit date:2012-05-09
Release date:2012-05-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.834 Å)
Cite:The loss of an electrostatic contact unique to AMPA receptor ligand binding domain 2 slows channel activation.
Biochemistry, 51, 2012
2FOE
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Structure of porcine pancreatic elastase in 80% hexane
Descriptor: (2S)-HEX-5-ENE-1,2-DIOL, CALCIUM ION, SULFATE ION, ...
Authors:Mattos, C, Bellamacina, C.R, Peisach, E, Pereira, A, Vitkup, D, Petsko, G.A, Ringe, D.
Deposit date:2006-01-13
Release date:2006-04-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Multiple solvent crystal structures: Probing binding sites, plasticity and hydration
J.Mol.Biol., 357, 2006
2FP1
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BU of 2fp1 by Molmil
Secreted Chorismate Mutase from Mycobacterium tuberculosis
Descriptor: Chorismate mutase, LEAD (II) ION
Authors:Okvist, M, Dey, R, Sasso, S, Grahn, E, Kast, P, Krengel, U.
Deposit date:2006-01-15
Release date:2006-03-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:1.6A Crystal Structure of the Secreted Chorismate Mutase from Mycobacterium tuberculosis: Novel Fold Topology Revealed
J.Mol.Biol., 357, 2006
6DRH
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BU of 6drh by Molmil
ADP-ribosyltransferase toxin/immunity pair
Descriptor: ADP-ribosyl-(Dinitrogen reductase) hydrolase, MAGNESIUM ION, PAAR repeat-containing protein, ...
Authors:Bosch, D.E, Ting, S, Allaire, M, Mougous, J.D.
Deposit date:2018-06-11
Release date:2018-10-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Bifunctional Immunity Proteins Protect Bacteria against FtsZ-Targeting ADP-Ribosylating Toxins.
Cell, 175, 2018
6R1B
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BU of 6r1b by Molmil
Crystal structure of UgpB from Mycobacterium tuberculosis in complex with glycerophosphocholine
Descriptor: 2-(((R)-2,3-DIHYDROXYPROPYL)PHOSPHORYLOXY)-N,N,N-TRIMETHYLETHANAMINIUM, GLYCEROL, MAGNESIUM ION, ...
Authors:Fenn, J, Nepravishta, R, Guy, C.S, Harrison, J, Angulo, J, Cameron, A.D, Fullam, E.
Deposit date:2019-03-14
Release date:2019-09-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.27000213 Å)
Cite:Structural Basis of Glycerophosphodiester Recognition by theMycobacterium tuberculosisSubstrate-Binding Protein UgpB.
Acs Chem.Biol., 14, 2019
4F9T
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Ribosomal protein L1 from Thermus thermophilus with substitution Thr217Ala
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 50S ribosomal protein L1, ...
Authors:Kljashtorny, V.G, Volchkov, S.A, Nikonova, E.Y, Kostareva, O.S, Tishchenko, S.V, Nevskaya, N.A, Nikonov, S.V.
Deposit date:2012-05-21
Release date:2012-08-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:[Crystal structures of mutant ribosomal proteins L1].
MOL.BIOL.(MOSCOW), 41, 2007
1HWL
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BU of 1hwl by Molmil
COMPLEX OF THE CATALYTIC PORTION OF HUMAN HMG-COA REDUCTASE WITH ROSUVASTATIN (FORMALLY KNOWN AS ZD4522)
Descriptor: 7-[4-(4-FLUORO-PHENYL)-6-ISOPROPYL-2-(METHANESULFONYL-METHYL-AMINO)-PYRIMIDIN-5-YL] -3,5-DIHYDROXY-HEPTANOIC ACID, ADENOSINE-5'-DIPHOSPHATE, HMG-COA REDUCTASE
Authors:Istvan, E.S, Deisenhofer, J.
Deposit date:2001-01-09
Release date:2001-05-11
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural mechanism for statin inhibition of HMG-CoA reductase.
Science, 292, 2001
4F22
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Kainate bound to the K660A mutant of the ligand binding domain of GluA3
Descriptor: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, Glutamate receptor 3, ZINC ION
Authors:Ahmed, A.H, Oswald, R.E.
Deposit date:2012-05-07
Release date:2012-05-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:The loss of an electrostatic contact unique to AMPA receptor ligand binding domain 2 slows channel activation.
Biochemistry, 51, 2012
4F4J
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BU of 4f4j by Molmil
Conversion of the enzyme guanylate kinase into a mitotic spindle orienting protein by a single mutation that inhibits gmp- induced closing
Descriptor: Guanylate kinase, SULFATE ION
Authors:Johnston, C.A, Whitney, D, Volkman, B.F, Prehoda, K.E.
Deposit date:2012-05-10
Release date:2012-06-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Conversion of the enzyme guanylate kinase into a mitotic-spindle orienting protein by a single mutation that inhibits GMP-induced closing.
Proc.Natl.Acad.Sci.USA, 108, 2011
1I3E
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BU of 1i3e by Molmil
HUMAN AZIDO-MET HEMOGLOBIN BART'S (GAMMA4)
Descriptor: AZIDE ION, HEMOGLOBIN GAMMA CHAINS, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kidd, R.D, Baker, H.M, Mathews, A.J, Brittain, T, Baker, E.N.
Deposit date:2001-02-15
Release date:2001-09-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Oligomerization and ligand binding in a homotetrameric hemoglobin: two high-resolution crystal structures of hemoglobin Bart's (gamma(4)), a marker for alpha-thalassemia.
Protein Sci., 10, 2001
4F6H
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BU of 4f6h by Molmil
Mutagenesis of zinc ligand residue Cys221 reveals plasticity in the IMP-1 metallo-b-lactamase active site
Descriptor: Beta-lactamase, PHOSPHATE ION, SULFATE ION, ...
Authors:Horton, L.B, Shanker, S, Sankaran, B, Mikulski, R, Brown, N.G, Phillips, K, Lykissa, E, Prasad, B.V.V, Palzkill, T.G.
Deposit date:2012-05-14
Release date:2013-03-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.744 Å)
Cite:Mutagenesis of zinc ligand residue Cys221 reveals plasticity in the IMP-1 metallo-beta-lactamase active site
Antimicrob.Agents Chemother., 56, 2012
1I6V
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BU of 1i6v by Molmil
THERMUS AQUATICUS CORE RNA POLYMERASE-RIFAMPICIN COMPLEX
Descriptor: DNA-DIRECTED RNA POLYMERASE, MAGNESIUM ION, RIFAMPICIN, ...
Authors:Campbell, E.A, Korzheva, N, Mustaev, A, Murakami, K, Goldfarb, A, Darst, S.A.
Deposit date:2001-03-05
Release date:2001-04-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural mechanism for rifampicin inhibition of bacterial rna polymerase.
Cell(Cambridge,Mass.), 104, 2001
6R8P
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BU of 6r8p by Molmil
Notum fragment 723
Descriptor: 2-(2-methylphenoxy)-~{N}-pyridin-3-yl-ethanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
Authors:Zhao, Y, Jones, E.Y.
Deposit date:2019-04-02
Release date:2019-05-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Discovery of 2-phenoxyacetamides as inhibitors of the Wnt-depalmitoleating enzyme NOTUM from an X-ray fragment screen.
Medchemcomm, 10, 2019
4F2V
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BU of 4f2v by Molmil
Crystal Structure of de novo designed serine hydrolase, Northeast Structural Genomics Consortium (NESG) Target OR165
Descriptor: DI(HYDROXYETHYL)ETHER, DODECYL-ALPHA-D-MALTOSIDE, De novo designed serine hydrolase
Authors:Kuzin, A, Lew, S, Seetharaman, J, Maglaqui, M, Xiao, R, Kohan, E, Rajagopalan, S, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2012-05-08
Release date:2012-05-30
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.493 Å)
Cite:Design of activated serine-containing catalytic triads with atomic-level accuracy.
Nat.Chem.Biol., 10, 2014
4F3R
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BU of 4f3r by Molmil
Structure of phosphopantetheine adenylyltransferase (CBU_0288) from Coxiella burnetii
Descriptor: CALCIUM ION, Phosphopantetheine adenylyltransferase
Authors:Franklin, M.C, Cheung, J, Rudolph, M, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
Deposit date:2012-05-09
Release date:2012-07-04
Last modified:2016-02-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
6DL8
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BU of 6dl8 by Molmil
Crystal Structure of an influenza A hemagglutinin antibody Fab variant CH67:1203d4 chimera
Descriptor: CH67:1203d4 FAB light chain, Ch67:1203d4 FAB heavy chain
Authors:Dong, J, Finn, J.A, Crowe, J.E.
Deposit date:2018-05-31
Release date:2019-06-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.805 Å)
Cite:Identification of Structurally Related Antibodies in Antibody Sequence Databases Using Rosetta-Derived Position-Specific Scoring.
Structure, 28, 2020
1I6I
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BU of 1i6i by Molmil
CRYSTAL STRUCTURE OF THE KIF1A MOTOR DOMAIN COMPLEXED WITH MG-AMPPCP
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, KINESIN-LIKE PROTEIN KIF1A, MAGNESIUM ION, ...
Authors:Kikkawa, M, Sablin, E.P, Okada, Y, Yajima, H, Fletterick, R.J, Hirokawa, N.
Deposit date:2001-03-02
Release date:2001-05-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Switch-based mechanism of kinesin motors
Nature, 411, 2001
4FB1
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BU of 4fb1 by Molmil
Crystal Structure of WT MauG in Complex with Pre-Methylamine Dehydrogenase Aged 60 Days
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, HEME C, ...
Authors:Yukl, E.T, Wilmot, C.M.
Deposit date:2012-05-22
Release date:2013-03-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Diradical intermediate within the context of tryptophan tryptophylquinone biosynthesis.
Proc.Natl.Acad.Sci.USA, 110, 2013
4FBX
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BU of 4fbx by Molmil
Complex structure of human protein kinase CK2 catalytic subunit crystallized in the presence of a bisubstrate inhibitor
Descriptor: CHLORIDE ION, Casein kinase II subunit alpha, bisubstrate inhibitor
Authors:Enkvist, E, Viht, K, Bischoff, N, Vahter, J, Saaver, S, Raidaru, G, Issinger, O.-G, Niefind, K, Uri, A.
Deposit date:2012-05-23
Release date:2012-10-17
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:A subnanomolar fluorescent probe for protein kinase CK2 interaction studies.
Org.Biomol.Chem., 10, 2012
2GEP
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BU of 2gep by Molmil
SULFITE REDUCTASE HEMOPROTEIN, OXIDIZED, SIROHEME FEIII [4FE-4S] +2,SULFITE COMPLEX
Descriptor: IRON/SULFUR CLUSTER, SIROHEME, SODIUM ION, ...
Authors:Crane, B.R, Getzoff, E.D.
Deposit date:1997-07-10
Release date:1998-01-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Probing the catalytic mechanism of sulfite reductase by X-ray crystallography: structures of the Escherichia coli hemoprotein in complex with substrates, inhibitors, intermediates, and products.
Biochemistry, 36, 1997

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