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PDB: 41322 results

2PF5
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BU of 2pf5 by Molmil
Crystal Structure of the Human TSG-6 Link Module
Descriptor: NONAETHYLENE GLYCOL, SULFATE ION, Tumor necrosis factor-inducible protein TSG-6
Authors:Higman, V.A, Mahoney, D.J, Noble, M.E.M, Day, A.J.
Deposit date:2007-04-04
Release date:2007-06-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Plasticity of the TSG-6 HA-binding loop and mobility in the TSG-6-HA complex revealed by NMR and X-ray crystallography
J.Mol.Biol., 371, 2007
3AKY
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BU of 3aky by Molmil
STABILITY, ACTIVITY AND STRUCTURE OF ADENYLATE KINASE MUTANTS
Descriptor: ADENYLATE KINASE, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, IMIDAZOLE
Authors:Abele, U, Schulz, G.E.
Deposit date:1995-07-28
Release date:1995-11-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Stability, activity and structure of adenylate kinase mutants.
Eur.J.Biochem., 231, 1995
3AID
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BU of 3aid by Molmil
A NEW CLASS OF HIV-1 PROTEASE INHIBITOR: THE CRYSTALLOGRAPHIC STRUCTURE, INHIBITION AND CHEMICAL SYNTHESIS OF AN AMINIMIDE PEPTIDE ISOSTERE
Descriptor: BENZOYLAMINO-BENZYL-METHYL-[2-HYDROXY-3-[1-METHYL-ETHYL-OXY-N-FORMAMIDYL]-4-PHENYL-BUTYL]-AMMONIUM, HUMAN IMMUNODEFICIENCY VIRUS PROTEASE
Authors:Rutenber, E.E, Stroud, R.M.
Deposit date:1997-05-15
Release date:1997-09-17
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A new class of HIV-1 protease inhibitor: the crystallographic structure, inhibition and chemical synthesis of an aminimide peptide isostere.
Bioorg.Med.Chem., 4, 1996
2DEG
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BU of 2deg by Molmil
Crystal structure of tt0972 protein form Thermus Thermophilus with Mn2(+) ions
Descriptor: GLYCEROL, MANGANESE (II) ION, SODIUM ION, ...
Authors:Inagaki, E, Nakano, N, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-02-10
Release date:2007-05-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of tt0972 protein form Thermus Thermophilus
To be Published
6F5U
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BU of 6f5u by Molmil
CRYSTAL STRUCTURE OF EBOLAVIRUS GLYCOPROTEIN IN COMPLEX WITH BEPRIDIL
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Bepridil, DIMETHYL SULFOXIDE, ...
Authors:Ren, J, Zhao, Y, Fry, E.E, Stuart, D.I.
Deposit date:2017-12-03
Release date:2018-01-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Target Identification and Mode of Action of Four Chemically Divergent Drugs against Ebolavirus Infection.
J. Med. Chem., 61, 2018
4MB4
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BU of 4mb4 by Molmil
Crystal structure of E153Q mutant of cold-adapted chitinase from Moritella complex with Nag4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase 60, GLYCEROL, ...
Authors:Malecki, P.H, Vorgias, C.E, Rypniewski, W.
Deposit date:2013-08-19
Release date:2014-03-19
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.481 Å)
Cite:Crystal structures of substrate-bound chitinase from the psychrophilic bacterium Moritella marina and its structure in solution
Acta Crystallogr.,Sect.D, 70, 2014
2P54
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BU of 2p54 by Molmil
a crystal structure of PPAR alpha bound with SRC1 peptide and GW735
Descriptor: 2-METHYL-2-(4-{[({4-METHYL-2-[4-(TRIFLUOROMETHYL)PHENYL]-1,3-THIAZOL-5-YL}CARBONYL)AMINO]METHYL}PHENOXY)PROPANOIC ACID, Nuclear receptor coactivator 1, Peroxisome proliferator-activated receptor alpha
Authors:Xu, R.X, Xu, H.E, Sierra, M.L, Montana, V.G, Lambert, M.H, Pianetti, P.M.
Deposit date:2007-03-14
Release date:2007-04-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Substituted 2-[(4-Aminomethyl)phenoxy]-2-methylpropionic Acid PPAR Agonists. 1.Discovery of a Novel Series of Potent HDLc Raising Agents.
J.Med.Chem., 50, 2007
6EU3
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BU of 6eu3 by Molmil
Apo RNA Polymerase III - closed conformation (cPOL3)
Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
Authors:Abascal-Palacios, G, Ramsay, E.P, Beuron, F, Morris, E, Vannini, A.
Deposit date:2017-10-27
Release date:2018-01-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of RNA polymerase III transcription initiation.
Nature, 553, 2018
8BXY
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BU of 8bxy by Molmil
FimH in complex with alpha1,6 core-fucosylated oligomannose-3, crystallized in the trigonal space group
Descriptor: NICKEL (II) ION, SULFATE ION, Type 1 fimbrin D-mannose specific adhesin, ...
Authors:Bridot, C, Bouckaert, J, Krammer, E.-M.
Deposit date:2022-12-11
Release date:2023-04-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural insights into a cooperative switch between one and two FimH bacterial adhesins binding pauci- and high-mannose type N-glycan receptors.
J.Biol.Chem., 299, 2023
6EXY
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BU of 6exy by Molmil
Neutron crystal structure of perdeuterated galectin-3C in complex with glycerol
Descriptor: GLYCEROL, Galectin-3
Authors:Manzoni, F, Schrader, T.E, Ostermann, A, Oksanen, E, Logan, D.T.
Deposit date:2017-11-10
Release date:2018-09-12
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (1.1 Å), X-RAY DIFFRACTION
Cite:Elucidation of Hydrogen Bonding Patterns in Ligand-Free, Lactose- and Glycerol-Bound Galectin-3C by Neutron Crystallography to Guide Drug Design.
J. Med. Chem., 61, 2018
6F9Q
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BU of 6f9q by Molmil
Binary complex of a 7S-cis-cis-nepetalactol cyclase from Nepeta mussinii with NAD+
Descriptor: 7S-cis-cis-nepetalactol cyclase, CHLORIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Lichman, B.R, Kamileen, M.O, Titchiner, G, Saalbach, G, Stevenson, C.E.M, Lawson, D.M, O'Connor, S.E.
Deposit date:2017-12-15
Release date:2018-12-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Uncoupled activation and cyclization in catmint reductive terpenoid biosynthesis.
Nat. Chem. Biol., 15, 2019
2P7P
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BU of 2p7p by Molmil
Crystal structure of genomically encoded fosfomycin resistance protein, FosX, from Listeria monocytogenes complexed with MN(II) and sulfate ion
Descriptor: Glyoxalase family protein, MANGANESE (II) ION, SULFATE ION
Authors:Fillgrove, K.L, Pakhomova, S, Schaab, M, Newcomer, M.E, Armstrong, R.N.
Deposit date:2007-03-20
Release date:2007-07-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structure and Mechanism of the Genomically Encoded Fosfomycin Resistance Protein, FosX, from Listeria monocytogenes.
Biochemistry, 46, 2007
2OSX
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BU of 2osx by Molmil
Endo-glycoceramidase II from Rhodococcus sp.: Ganglioside GM3 Complex
Descriptor: Endoglycoceramidase II, GLYCEROL, N-((E,2S,3R)-1,3-DIHYDROXYOCTADEC-4-EN-2-YL)PALMITAMIDE, ...
Authors:Caines, M.E.C, Strynadka, N.C.J.
Deposit date:2007-02-06
Release date:2007-02-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structural and Mechanistic Analyses of endo-Glycoceramidase II, a Membrane-associated Family 5 Glycosidase in the Apo and GM3 Ganglioside-bound Forms.
J.Biol.Chem., 282, 2007
6ESQ
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BU of 6esq by Molmil
Structure of the acetoacetyl-CoA thiolase/HMG-CoA synthase complex from Methanothermococcus thermolithotrophicus soaked with acetyl-CoA
Descriptor: CHLORIDE ION, COENZYME A, HydroxyMethylGlutaryl-CoA synthase, ...
Authors:Voegeli, B, Engilberge, S, Girard, E, Riobe, F, Maury, O, Erb, J.T, Shima, S, Wagner, T.
Deposit date:2017-10-24
Release date:2018-03-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Archaeal acetoacetyl-CoA thiolase/HMG-CoA synthase complex channels the intermediate via a fused CoA-binding site.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2DS8
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BU of 2ds8 by Molmil
Structure of the ZBD-XB complex
Descriptor: ATP-dependent Clp protease ATP-binding subunit clpX, SspB-tail peptide, ZINC ION
Authors:Park, E.Y, Lee, B.G, Hong, S.B, Kim, H.W, Song, H.K.
Deposit date:2006-06-22
Release date:2007-02-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis of SspB-tail Recognition by the Zinc Binding Domain of ClpX.
J.Mol.Biol., 367, 2007
1TXE
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BU of 1txe by Molmil
Solution structure of the active-centre mutant Ile14Ala of the histidine-containing phosphocarrier protein (HPr) from Staphylococcus carnosus
Descriptor: Phosphocarrier protein HPr
Authors:Moeglich, A, Koch, B, Hengstenberg, W, Brunner, E, Kalbitzer, H.R, Structural Proteomics in Europe (SPINE)
Deposit date:2004-07-04
Release date:2005-03-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the active-centre mutant I14A of the histidine-containing phosphocarrier protein from Staphylococcus carnosus
Eur.J.Biochem., 271, 2004
4DG4
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BU of 4dg4 by Molmil
Human mesotrypsin-S39Y complexed with bovine pancreatic trypsin inhibitor (BPTI)
Descriptor: CALCIUM ION, PRSS3 protein, Pancreatic trypsin inhibitor, ...
Authors:Salameh, M.A, Soares, A.S, Radisky, E.S.
Deposit date:2012-01-24
Release date:2012-09-12
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Presence versus absence of hydrogen bond donor Tyr-39 influences interactions of cationic trypsin and mesotrypsin with protein protease inhibitors.
Protein Sci., 21, 2012
1KUX
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BU of 1kux by Molmil
X-ray Crystallographic Studies of Serotonin N-acetyltransferase Catalysis and Inhibition
Descriptor: COA-S-TRIMETHYLENE-ACETYL-TRYPTAMINE, Serotonin N-acetyltransferase
Authors:Wolf, E, De Angelis, J, Khalil, E.M, Cole, P.A, Burley, S.K.
Deposit date:2002-01-22
Release date:2002-03-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystallographic studies of serotonin N-acetyltransferase catalysis and inhibition.
J.Mol.Biol., 317, 2002
1U98
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BU of 1u98 by Molmil
Crystal Structure of E. coli RecA in a Compressed Helical Filament Form3
Descriptor: GLYCEROL, RecA protein, SULFATE ION
Authors:Xing, X, Bell, C.E.
Deposit date:2004-08-09
Release date:2004-09-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of Escherichia coli RecA in a compressed helical filament.
J.Mol.Biol., 342, 2004
2P4T
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BU of 2p4t by Molmil
Structure of the Q67H mutant of R67 dihydrofolate reductase-NADP+ complex reveals a novel cofactor binding mode
Descriptor: Dihydrofolate reductase type 2, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Divya, N, Grifith, E, Narayana, N.
Deposit date:2007-03-13
Release date:2007-06-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structure of the Q67H mutant of R67 dihydrofolate reductase-NADP+ complex reveals a novel cofactor binding mode.
Protein Sci., 16, 2007
2P83
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BU of 2p83 by Molmil
Potent and selective isophthalamide S2 hydroxyethylamine inhibitor of BACE1
Descriptor: Beta-secretase 1, N~3~-{(1S,2R)-1-(3,5-DIFLUOROBENZYL)-2-HYDROXY-3-[(3-METHOXYBENZYL)AMINO]PROPYL}-N~1~,N~1~-DIPROPYLBENZENE-1,3,5-TRICARBOXAMIDE, PHOSPHATE ION
Authors:Benson, T.E, Prince, D.B, Tomasselli, A.G, Emmons, T.L, Paddock, D.J.
Deposit date:2007-03-21
Release date:2007-06-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Potent and selective isophthalamide S(2) hydroxyethylamine inhibitors of BACE1.
Bioorg.Med.Chem.Lett., 17, 2007
2DFS
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BU of 2dfs by Molmil
3-D structure of Myosin-V inhibited state
Descriptor: Calmodulin, Myosin-5A
Authors:Liu, J, Taylor, D.W, Krementsova, E.B, Trybus, K.M, Taylor, K.A.
Deposit date:2006-03-03
Release date:2006-04-25
Last modified:2024-03-13
Method:ELECTRON CRYSTALLOGRAPHY (24 Å)
Cite:Three-dimensional structure of the myosin V inhibited state by cryoelectron tomography
Nature, 442, 2006
2DKB
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BU of 2dkb by Molmil
DIALKYLGLYCINE DECARBOXYLASE STRUCTURE: BIFUNCTIONAL ACTIVE SITE AND ALKALI METAL BINDING SITES
Descriptor: 2,2-DIALKYLGLYCINE DECARBOXYLASE (PYRUVATE), 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Toney, M.D, Hohenester, E, Jansonius, J.N.
Deposit date:1994-07-12
Release date:1994-10-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Dialkylglycine decarboxylase structure: bifunctional active site and alkali metal sites.
Science, 261, 1993
2DPR
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BU of 2dpr by Molmil
The crystal structures of the calcium-bound con-G and con-T(K7Glu) dimeric peptides demonstrate a novel metal-dependent helix-forming motif
Descriptor: CALCIUM ION, Conantokin-T
Authors:Cnudde, S.E, Prorok, M, Dai, Q, Castellino, F.J, Geiger, J.H.
Deposit date:2006-05-13
Release date:2007-04-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structures of the calcium-bound con-G and con-T[K7gamma] dimeric peptides demonstrate a metal-dependent helix-forming motif
J.Am.Chem.Soc., 129, 2007
2DFK
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BU of 2dfk by Molmil
Crystal structure of the CDC42-Collybistin II complex
Descriptor: GLYCEROL, SULFATE ION, cell division cycle 42 isoform 1, ...
Authors:Xiang, S, Kim, E.Y, Connelly, J.J, Nassar, N, Kirsch, J, Winking, J, Schwarz, G, Schindelin, H.
Deposit date:2006-03-02
Release date:2006-05-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The Crystal Structure of Cdc42 in Complex with Collybistin II, a Gephyrin-interacting Guanine Nucleotide Exchange Factor.
J.Mol.Biol., 359, 2006

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