Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 182 results

2J0E
DownloadVisualize
BU of 2j0e by Molmil
Three dimensional structure and catalytic mechanism of 6- phosphogluconolactonase from Trypanosoma brucei
Descriptor: 6-PHOSPHOGLUCONOLACTONASE, MERCURY (II) ION, POTASSIUM ION, ...
Authors:Delarue, M, Duclert-Savatier, N, Miclet, E, Haouz, A, Giganti, D, Ouazzani, J, Lopez, P, Nilges, M, Stoven, V.
Deposit date:2006-08-02
Release date:2007-01-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Three Dimensional Structure and Implications for the Catalytic Mechanism of 6-Phosphogluconolactonase from Trypanosoma Brucei.
J.Mol.Biol., 366, 2007
1JMS
DownloadVisualize
BU of 1jms by Molmil
Crystal Structure of the Catalytic Core of Murine Terminal Deoxynucleotidyl Transferase
Descriptor: MAGNESIUM ION, SODIUM ION, TERMINAL DEOXYNUCLEOTIDYLTRANSFERASE
Authors:Delarue, M, Boule, J.B, Lescar, J, Expert-Bezancon, N, Sukumar, N, Jourdan, N, Rougeon, F, Papanicolaou, C.
Deposit date:2001-07-19
Release date:2002-01-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Crystal structures of a template-independent DNA polymerase: murine terminal deoxynucleotidyltransferase.
Embo J., 21, 2002
6V4B
DownloadVisualize
BU of 6v4b by Molmil
DeCLIC N-terminal Domain 34-202
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, Neur_chan_LBD domain-containing protein, ...
Authors:Delarue, M, Hu, H.D.
Deposit date:2019-11-27
Release date:2020-06-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for allosteric transitions of a multidomain pentameric ligand-gated ion channel.
Proc.Natl.Acad.Sci.USA, 117, 2020
6V4A
DownloadVisualize
BU of 6v4a by Molmil
An open conformation of a Pentameic ligand-gated ion channel with additional N-terminal domain
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Neur_chan_LBD domain-containing protein, PHOSPHATIDYLGLYCEROL-PHOSPHOGLYCEROL
Authors:Delarue, M, Hu, H.D.
Deposit date:2019-11-27
Release date:2020-06-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.83 Å)
Cite:Structural basis for allosteric transitions of a multidomain pentameric ligand-gated ion channel.
Proc.Natl.Acad.Sci.USA, 117, 2020
6V4S
DownloadVisualize
BU of 6v4s by Molmil
A Closed pore conformation of a Pentameic ligand-gated ion channel with additional N-terminal domain
Descriptor: CALCIUM ION, CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Delarue, M, Hu, H.D.
Deposit date:2019-11-29
Release date:2020-06-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:Structural basis for allosteric transitions of a multidomain pentameric ligand-gated ion channel.
Proc.Natl.Acad.Sci.USA, 117, 2020
1KDH
DownloadVisualize
BU of 1kdh by Molmil
Binary Complex of Murine Terminal Deoxynucleotidyl Transferase with a Primer Single Stranded DNA
Descriptor: 5'-D(P*(BRU)P*(BRU)P*(BRU)P*(BRU))-3', MAGNESIUM ION, SODIUM ION, ...
Authors:Delarue, M, Boule, J.B, Lescar, J, Expert-Bezancon, N, Jourdan, N, Sukumar, N, Rougeon, F, Papanicolaou, C.
Deposit date:2001-11-13
Release date:2002-05-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of a template-independent DNA polymerase: murine terminal deoxynucleotidyltransferase.
EMBO J., 21, 2002
1KEJ
DownloadVisualize
BU of 1kej by Molmil
Crystal Structure of Murine Terminal Deoxynucleotidyl Transferase complexed with ddATP
Descriptor: 2',3'-DIDEOXYADENOSINE-5'-TRIPHOSPHATE, COBALT (II) ION, SODIUM ION, ...
Authors:Delarue, M, Boule, J.B, Lescar, J, Expert-Bezancon, N, Jourdan, N, Sukumar, N, Rougeon, F, Papanicolaou, C.
Deposit date:2001-11-16
Release date:2002-05-16
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of a template-independent DNA polymerase: murine terminal deoxynucleotidyltransferase.
EMBO J., 21, 2002
1GSI
DownloadVisualize
BU of 1gsi by Molmil
CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE KINASE COMPLEXED WITH THYMIDINE MONOPHOSPHATE (TMP)
Descriptor: ACETATE ION, MAGNESIUM ION, SULFATE ION, ...
Authors:Ursby, T, Weik, M, Fioravanti, E, Delarue, M, Goeldner, M, Bourgeois, D.
Deposit date:2002-01-03
Release date:2002-03-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Cryophotolysis of Caged Compounds: A Technique for Trapping Intermediate States in Protein Crystals
Acta Crystallogr.,Sect.D, 58, 2002
5IUX
DownloadVisualize
BU of 5iux by Molmil
GLIC-V135C bimane labelled X-ray structure
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2,3,5,6-tetramethyl-1H,7H-pyrazolo[1,2-a]pyrazole-1,7-dione, ACETATE ION, ...
Authors:Fourati, Z, Menny, A, Delarue, M.
Deposit date:2016-03-18
Release date:2017-03-29
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of a pre-active conformation of a pentameric channel receptor.
Elife, 6, 2017
7PBK
DownloadVisualize
BU of 7pbk by Molmil
Vibriophage phiVC8 family A DNA polymerase (DpoZ), two conformations: thumb-exo open and thumb-exo closed
Descriptor: DNA polymerase I
Authors:Czernecki, D, Hu, H, Romoli, F, Delarue, M.
Deposit date:2021-08-02
Release date:2021-11-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural dynamics and determinants of 2-aminoadenine specificity in DNA polymerase DpoZ of vibriophage phi VC8.
Nucleic Acids Res., 49, 2021
6EMX
DownloadVisualize
BU of 6emx by Molmil
X-ray structure of the N15'C mutant of GLIC in complex with bromoform
Descriptor: CHLORIDE ION, Proton-gated ion channel, SODIUM ION, ...
Authors:Fourati, Z, Delarue, M.
Deposit date:2017-10-03
Release date:2018-06-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Basis for a Bimodal Allosteric Mechanism of General Anesthetic Modulation in Pentameric Ligand-Gated Ion Channels.
Cell Rep, 23, 2018
4X5T
DownloadVisualize
BU of 4x5t by Molmil
alpha 1 glycine receptor transmembrane structure fused to the extracellular domain of GLIC
Descriptor: ACETATE ION, CHLORIDE ION, NICKEL (II) ION, ...
Authors:Sauguet, L, Corringer, P.J, Huon, C, Delarue, M.
Deposit date:2014-12-05
Release date:2015-02-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Allosteric and hyperekplexic mutant phenotypes investigated on an alpha 1 glycine receptor transmembrane structure.
Proc.Natl.Acad.Sci.USA, 112, 2015
5L4H
DownloadVisualize
BU of 5l4h by Molmil
X-ray structure of the 2-22' locally-closed mutant of GLIC in complex with 5-(2-BROMO-ETHYL)-5-ETHYL-PYRIMIDINE-2,4,6-TRIONE (brominated barbiturate)
Descriptor: 5-(2-bromoethyl)-5-ethyl-1,3-diazinane-2,4,6-trione, CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Fourati, Z, Ruza, R.R, Delarue, M.
Deposit date:2016-05-25
Release date:2016-12-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Barbiturates Bind in the GLIC Ion Channel Pore and Cause Inhibition by Stabilizing a Closed State.
J. Biol. Chem., 292, 2017
5L4E
DownloadVisualize
BU of 5l4e by Molmil
X-ray structure of the 2-22' locally-closed mutant of GLIC in complex with thiopental
Descriptor: 5-ethyl-5-[(2R)-pentan-2-yl]-2-thioxodihydropyrimidine-4,6(1H,5H)-dione, CHLORIDE ION, DODECANE, ...
Authors:Fourati, Z, Ruza, R.R, Delarue, M.
Deposit date:2016-05-25
Release date:2016-12-21
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Barbiturates Bind in the GLIC Ion Channel Pore and Cause Inhibition by Stabilizing a Closed State.
J. Biol. Chem., 292, 2017
5L47
DownloadVisualize
BU of 5l47 by Molmil
X-ray structure of the 2-22' locally-closed mutant of GLIC in complex with cyanoselenobarbital (seleniated barbiturate)
Descriptor: 2-[5-ethyl-2,4,6-tris(oxidanylidene)-1,3-diazinan-5-yl]ethyl selenocyanate, ACETATE ION, CHLORIDE ION, ...
Authors:Reinholds Ruza, R, Fourati, Z, Delarue, M.
Deposit date:2016-05-25
Release date:2016-12-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Barbiturates Bind in the GLIC Ion Channel Pore and Cause Inhibition by Stabilizing a Closed State.
J. Biol. Chem., 292, 2017
3LSV
DownloadVisualize
BU of 3lsv by Molmil
Structure of the A237F mutant of the pentameric ligand gated ion channel from Gloeobacter Violaceus
Descriptor: Ligand-gated ion channel
Authors:Nury, H, Corringer, P.J, Delarue, M.
Deposit date:2010-02-13
Release date:2010-04-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:One-microsecond molecular dynamics simulation of channel gating in a nicotinic receptor homologue.
Proc.Natl.Acad.Sci.USA, 107, 2010
1GTV
DownloadVisualize
BU of 1gtv by Molmil
CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE KINASE COMPLEXED WITH THYMIDINE-5'-DIPHOSPHATE (TDP)
Descriptor: ACETATE ION, MAGNESIUM ION, SULFATE ION, ...
Authors:Ursby, T, Weik, M, Fioravanti, E, Delarue, M, Goeldner, M, Bourgeois, D.
Deposit date:2002-01-21
Release date:2002-03-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Cryophotolysis of Caged Compounds: A Technique for Trapping Intermediate States in Protein Crystals
Acta Crystallogr.,Sect.D, 58, 2002
7ODX
DownloadVisualize
BU of 7odx by Molmil
Cyanophage S-2L Succinoaminodeoxyadenylate synthetase (PurZ) bound to dGMP and dATP as an energy donor
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, Succinoaminodeoxyadenylate synthetase (PurZ)
Authors:Czernecki, D, Delarue, M.
Deposit date:2021-04-30
Release date:2021-09-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.69617081 Å)
Cite:Characterization of a triad of genes in cyanophage S-2L sufficient to replace adenine by 2-aminoadenine in bacterial DNA.
Nat Commun, 12, 2021
7ODY
DownloadVisualize
BU of 7ody by Molmil
Cyanophage S-2L MazG-like pyrophosphohydrolase bound to dGDP and three catalytic Mn2+ ions per active site
Descriptor: 2'-DEOXYGUANOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, MazG-like pyrophosphohydrolase (MazZ), ...
Authors:Czernecki, D, Delarue, M.
Deposit date:2021-04-30
Release date:2021-09-01
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Characterization of a triad of genes in cyanophage S-2L sufficient to replace adenine by 2-aminoadenine in bacterial DNA.
Nat Commun, 12, 2021
9FTJ
DownloadVisualize
BU of 9ftj by Molmil
Closed and disordered conformation of the pentameric ligand-gated ion channel, DeCLIC at pH 5 with 10mM EDTA
Descriptor: Neurotransmitter-gated ion-channel ligand-binding domain-containing protein
Authors:Rovsnik, U, Anden, O, Lycksell, M, Delarue, M, Howard, R.J, Lindahl, E.
Deposit date:2024-06-24
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural characterization of pH-modulated closed and open states in a pentameric ligand-gated ion channel
To Be Published
9FTH
DownloadVisualize
BU of 9fth by Molmil
Open conformation of the pentameric ligand-gated ion channel, DeCLIC at pH 5 with 10mM Ca2+
Descriptor: Neurotransmitter-gated ion-channel ligand-binding domain-containing protein
Authors:Rovsnik, U, Anden, O, Lycksell, M, Delarue, M, Howard, R.J, Lindahl, E.
Deposit date:2024-06-24
Release date:2024-09-11
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural characterization of pH-modulated closed and open states in a pentameric ligand-gated ion channel
To Be Published
9FTG
DownloadVisualize
BU of 9ftg by Molmil
Closed conformation of the pentameric ligand-gated ion channel, DeCLIC at pH 5 with 10 mM Ca2+
Descriptor: CALCIUM ION, Neurotransmitter-gated ion-channel ligand-binding domain-containing protein
Authors:Rovsnik, U, Anden, O, Lycksell, M, Delarue, M, Howard, R.J, Lindahl, E.
Deposit date:2024-06-24
Release date:2024-09-11
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural characterization of pH-modulated closed and open states in a pentameric ligand-gated ion channel
To Be Published
9FTI
DownloadVisualize
BU of 9fti by Molmil
Open conformation of the pentameric ligand-gated ion channel, DeCLIC at pH 5 with 10mM EDTA
Descriptor: Neurotransmitter-gated ion-channel ligand-binding domain-containing protein
Authors:Rovsnik, U, Anden, O, Lycksell, M, Delarue, M, Howard, R.J, Lindahl, E.
Deposit date:2024-06-24
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural characterization of pH-modulated closed and open states in a pentameric ligand-gated ion channel
To Be Published
4ZZC
DownloadVisualize
BU of 4zzc by Molmil
The GLIC pentameric Ligand-Gated Ion Channel open form complexed to xenon
Descriptor: ACETATE ION, CHLORIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, ...
Authors:Sauguet, L, Fourati, Z, Prange, T, Delarue, M, Colloc'h, N.
Deposit date:2015-05-22
Release date:2016-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Basis for Xenon Inhibition in a Cationic Pentameric Ligand-Gated Ion Channel.
Plos One, 11, 2016
4ZZB
DownloadVisualize
BU of 4zzb by Molmil
The GLIC pentameric Ligand-Gated Ion Channel Locally-closed form complexed to xenon
Descriptor: ACETATE ION, CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Sauguet, L, Fourati, Z, Prange, T, Delarue, M, Colloc'h, N.
Deposit date:2015-05-22
Release date:2016-03-02
Last modified:2018-11-21
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural Basis for Xenon Inhibition in a Cationic Pentameric Ligand-Gated Ion Channel.
Plos One, 11, 2016

226707

건을2024-10-30부터공개중

PDB statisticsPDBj update infoContact PDBjnumon