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PDB: 1599 results

4RHK
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BU of 4rhk by Molmil
Crystal structure of T. brucei arginase-like protein in an oxidized form
Descriptor: Arginase, GLYCEROL
Authors:Hai, Y, Barrett, M.P, Christianson, D.W.
Deposit date:2014-10-02
Release date:2014-12-31
Last modified:2015-02-04
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal Structure of an Arginase-like Protein from Trypanosoma brucei That Evolved without a Binuclear Manganese Cluster.
Biochemistry, 54, 2015
4FXY
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BU of 4fxy by Molmil
Crystal structure of rat neurolysin with bound pyrazolidin inhibitor
Descriptor: 1-{(2S)-1-[(3R)-3-(2-chlorophenyl)-2-(2-fluorophenyl)pyrazolidin-1-yl]-1-oxopropan-2-yl}-3-[(1R,3S,5R,7R)-tricyclo[3.3.1.1~3,7~]dec-2-yl]urea, Neurolysin, mitochondrial, ...
Authors:Rodgers, D.W, Hines, C.S.
Deposit date:2012-07-03
Release date:2013-11-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Allosteric inhibition of the neuropeptidase neurolysin.
J.Biol.Chem., 289, 2014
4RHL
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BU of 4rhl by Molmil
Crystal structure of T. brucei arginase-like protein triple mutant S149D/R151H/S226D bound with Mn2+
Descriptor: Arginase, GLYCEROL, MANGANESE (II) ION
Authors:Hai, Y, Barrett, M.P, Christianson, D.W.
Deposit date:2014-10-02
Release date:2014-12-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structure of an Arginase-like Protein from Trypanosoma brucei That Evolved without a Binuclear Manganese Cluster.
Biochemistry, 54, 2015
4RHQ
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BU of 4rhq by Molmil
Crystal structure of T. brucei arginase-like protein double mutant S149D/S153D
Descriptor: 1,2-ETHANEDIOL, Arginase, GLYCEROL
Authors:Hai, Y, Barrett, M.P, Christianson, D.W.
Deposit date:2014-10-02
Release date:2014-12-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Crystal Structure of an Arginase-like Protein from Trypanosoma brucei That Evolved without a Binuclear Manganese Cluster.
Biochemistry, 54, 2015
4RHJ
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BU of 4rhj by Molmil
Crystal structure of wild-type T. brucei arginase-like protein in a reduced form
Descriptor: 1,2-ETHANEDIOL, Arginase
Authors:Hai, Y, Barrett, M.P, Christianson, D.W.
Deposit date:2014-10-02
Release date:2014-12-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of an Arginase-like Protein from Trypanosoma brucei That Evolved without a Binuclear Manganese Cluster.
Biochemistry, 54, 2015
4RHM
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BU of 4rhm by Molmil
Crystal structure of T. brucei arginase-like protein quadruple mutant S149D/R151H/S153D/S226D
Descriptor: 1,2-ETHANEDIOL, Arginase, GLYCEROL, ...
Authors:Hai, Y, Barrett, M.P, Christianson, D.W.
Deposit date:2014-10-02
Release date:2014-12-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of an Arginase-like Protein from Trypanosoma brucei That Evolved without a Binuclear Manganese Cluster.
Biochemistry, 54, 2015
6B15
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BU of 6b15 by Molmil
Crystal structure of CBMbc (family CBM26) from Eubacterium rectale Amy13K
Descriptor: 1,2-ETHANEDIOL, Amy13K
Authors:Cockburn, D.W, Wawrzak, Z, Perez Medina, K, Koropatkin, N.M.
Deposit date:2017-09-16
Release date:2017-11-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Novel carbohydrate binding modules in the surface anchored alpha-amylase of Eubacterium rectale provide a molecular rationale for the range of starches used by this organism in the human gut.
Mol. Microbiol., 107, 2018
3CKE
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BU of 3cke by Molmil
Crystal structure of aristolochene synthase in complex with 12,13-difluorofarnesyl diphosphate
Descriptor: (2E,6E)-12-fluoro-11-(fluoromethyl)-3,7-dimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate, Aristolochene synthase, BETA-MERCAPTOETHANOL, ...
Authors:Shishova, E.Y, Yu, F, Miller, D.J, Faraldos, J.A, Zhao, Y, Coates, R.M, Allemann, R.K, Cane, D.E, Christianson, D.W.
Deposit date:2008-03-14
Release date:2008-04-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray Crystallographic Studies of Substrate Binding to Aristolochene Synthase Suggest a Metal Ion Binding Sequence for Catalysis.
J.Biol.Chem., 283, 2008
4RN2
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BU of 4rn2 by Molmil
Crystal structure of S39D HDAC8 in complex with a largazole analogue.
Descriptor: (5R,8S,11S)-5-methyl-8-(propan-2-yl)-11-[(1E)-4-sulfanylbut-1-en-1-yl]-3-thia-7,10,14,17,21-pentaazatricyclo[14.3.1.1~2,5~]henicosa-1(20),2(21),16,18-tetraene-6,9,13-trione, Histone deacetylase 8, POTASSIUM ION, ...
Authors:Decroos, C, Christianson, D.W.
Deposit date:2014-10-22
Release date:2015-04-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Variable Active Site Loop Conformations Accommodate the Binding of Macrocyclic Largazole Analogues to HDAC8.
Biochemistry, 54, 2015
3CAA
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BU of 3caa by Molmil
CLEAVED ANTICHYMOTRYPSIN A347R
Descriptor: ANTICHYMOTRYPSIN
Authors:Lukacs, C.M, Christianson, D.W.
Deposit date:1997-08-18
Release date:1998-02-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Engineering an anion-binding cavity in antichymotrypsin modulates the "spring-loaded" serpin-protease interaction.
Biochemistry, 37, 1998
3HDS
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BU of 3hds by Molmil
Crystal structure of 4-methylmuconolactone methylisomerase in complex with MES
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-methylmuconolactone methylisomerase, short peptide ASWSA
Authors:Marin, M, Heinz, D.W, Pieper, D.H, Klink, B.U.
Deposit date:2009-05-07
Release date:2009-09-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure and catalytic mechanism of 4-methylmuconolactone methylisomerase
J.Biol.Chem., 284, 2009
7TEH
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BU of 7teh by Molmil
Room temperature X-ray structure of SARS-CoV-2 main protease (3CL Mpro) in complex with BBH-2
Descriptor: (1R,2S,5S)-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-N-{(1Z,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase
Authors:Kovalevsky, A, Kneller, D.W, Coates, L.
Deposit date:2022-01-05
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Covalent narlaprevir- and boceprevir-derived hybrid inhibitors of SARS-CoV-2 main protease
Nat Commun, 13, 2022
7TFR
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BU of 7tfr by Molmil
Room temperature X-ray structure of SARS-CoV-2 main protease (3CL Mpro) in complex with NBH-2
Descriptor: (1R,2S,5S)-N-{(1Z,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-({1-[(2-methylpropane-2-sulfonyl)methyl]cyclohexyl}carbamoyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase
Authors:Kovalevsky, A, Kneller, D.W, Coates, L.
Deposit date:2022-01-07
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Covalent narlaprevir- and boceprevir-derived hybrid inhibitors of SARS-CoV-2 main protease
Nat Commun, 13, 2022
7TDU
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BU of 7tdu by Molmil
Joint X-ray/neutron structure of SARS-CoV-2 main protease (3CL Mpro) in complex with BBH-1
Descriptor: (1R,2S,5S)-N-{(1S,2S)-1-(1,3-benzothiazol-2-yl)-1-hydroxy-3-[(3S)-2-oxo(1-~2~H)pyrrolidin-3-yl]propan-2-yl}-3-{N-[tert-butyl(~2~H)carbamoyl]-3-methyl-L-(N-~2~H)valyl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-(~2~H)carboxamide, 3C-like proteinase
Authors:Kovalevsky, A, Kneller, D.W, Coates, L.
Deposit date:2022-01-03
Release date:2022-03-02
Last modified:2024-04-03
Method:NEUTRON DIFFRACTION (1.85 Å), X-RAY DIFFRACTION
Cite:Covalent narlaprevir- and boceprevir-derived hybrid inhibitors of SARS-CoV-2 main protease
Nat Commun, 13, 2022
3G1R
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BU of 3g1r by Molmil
Crystal structure of human liver 5beta-reductase (AKR1D1) in complex with NADP and Finasteride. Resolution 1.70 A
Descriptor: (4aR,4bS,6aS,7S,9aS,9bS,11aR)-N-tert-butyl-4a,6a-dimethyl-2-oxo-2,4a,4b,5,6,6a,7,8,9,9a,9b,10,11,11a-tetradecahydro-1H-indeno[5,4-f]quinoline-7-carboxamide, 3-oxo-5-beta-steroid 4-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Di Costanzo, L, Drury, J.E, Penning, T.M, Christianson, D.W.
Deposit date:2009-01-30
Release date:2009-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Inhibition of human steroid 5beta-reductase (AKR1D1) by finasteride and structure of the enzyme-inhibitor complex.
J.Biol.Chem., 284, 2009
4RZC
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BU of 4rzc by Molmil
Fv M6P-1 in complex with mannose-6-phosphate
Descriptor: 6-O-phosphono-alpha-D-mannopyranose, Fv M6P-1 heavy chain, Fv M6P-1 light chain, ...
Authors:Blackler, R.J, Evans, D.W, Evans, S.V, Muller-Loennies, S.
Deposit date:2014-12-19
Release date:2015-11-04
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.723 Å)
Cite:Single-chain antibody-fragment M6P-1 possesses a mannose 6-phosphate monosaccharide-specific binding pocket that distinguishes N-glycan phosphorylation in a branch-specific manner.
Glycobiology, 26, 2016
7T5H
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BU of 7t5h by Molmil
Structure of rabies virus phosphoprotein C-terminal domain, wild type
Descriptor: 1,2-ETHANEDIOL, PHOSPHATE ION, Phosphoprotein, ...
Authors:Zhan, J, Metcalfe, R.D, Gooley, P.R, Griffin, M.D.W.
Deposit date:2021-12-12
Release date:2022-04-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular Basis of Functional Effects of Phosphorylation of the C-Terminal Domain of the Rabies Virus P Protein.
J.Virol., 96, 2022
7T5G
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BU of 7t5g by Molmil
Structure of rabies virus phosphoprotein C-terminal domain, S210E mutant
Descriptor: Phosphoprotein, SULFATE ION
Authors:Zhan, J, Metcalfe, R.D, Gooley, P.R, Griffin, M.D.W.
Deposit date:2021-12-12
Release date:2022-04-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular Basis of Functional Effects of Phosphorylation of the C-Terminal Domain of the Rabies Virus P Protein.
J.Virol., 96, 2022
6CSS
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BU of 6css by Molmil
Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with cyclopentenylhydroxamate
Descriptor: 1,2-ETHANEDIOL, Hdac6 protein, N-hydroxycyclopent-1-ene-1-carboxamide, ...
Authors:Porter, N.J, Christianson, D.W.
Deposit date:2018-03-21
Release date:2018-05-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Entropy as a Driver of Selectivity for Inhibitor Binding to Histone Deacetylase 6.
Biochemistry, 57, 2018
3CPM
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BU of 3cpm by Molmil
plant peptide deformylase PDF1B crystal structure
Descriptor: Peptide deformylase, chloroplast, SULFATE ION, ...
Authors:Rodgers, D.W, Houtz, R.L, Dirk, L.M.A, Schmidt, J.J, Cai, Y.
Deposit date:2008-03-31
Release date:2008-07-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Insights into the substrate specificity of plant peptide deformylase, an essential enzyme with potential for the development of novel biotechnology applications in agriculture
Biochem.J., 413, 2008
4E20
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BU of 4e20 by Molmil
Structure of mouse Tyk-2 complexed to a 3-aminoindazole inhibitor
Descriptor: N-[4-(3-amino-1H-indazol-5-yl)phenyl]-3-chlorobenzenesulfonamide, Non-receptor tyrosine-protein kinase TYK2
Authors:Argiriadi, M.A, Talanian, R.V, Borhani, D.W.
Deposit date:2012-03-07
Release date:2012-10-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Enabling structure-based drug design of Tyk2 through co-crystallization with a stabilizing aminoindazole inhibitor.
Bmc Struct.Biol., 12, 2012
7SQ1
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BU of 7sq1 by Molmil
BG505.MD39TS Env trimer in complex with Fab from antibody C05
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, C05 Fab Light chain, ...
Authors:Moore, A, Du, J, Xu, Z, Walker, S, Kulp, D.W, Pallesen, J.
Deposit date:2021-11-04
Release date:2022-06-22
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Induction of tier-2 neutralizing antibodies in mice with a DNA-encoded HIV envelope native like trimer.
Nat Commun, 13, 2022
4DPQ
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BU of 4dpq by Molmil
The structure of dihydrodipicolinate synthase 2 from Arabidopsis thaliana in complex with (S)-lysine
Descriptor: Dihydrodipicolinate synthase 2, chloroplastic, LYSINE, ...
Authors:Griffin, M.D.W, Billakanti, J.M, Gerrard, J.A, Dobson, R.C.J, Pearce, F.G.
Deposit date:2012-02-14
Release date:2012-07-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:Characterisation of the first enzymes committed to lysine biosynthesis in Arabidopsis thaliana
Plos One, 7, 2012
6CSP
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BU of 6csp by Molmil
Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with cyclohexenylhydroxamate
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Porter, N.J, Christianson, D.W.
Deposit date:2018-03-21
Release date:2018-05-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.237 Å)
Cite:Entropy as a Driver of Selectivity for Inhibitor Binding to Histone Deacetylase 6.
Biochemistry, 57, 2018
3DD5
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BU of 3dd5 by Molmil
Glomerella cingulata E600-cutinase complex
Descriptor: Cutinase, DIETHYL PHOSPHONATE
Authors:Nyon, M.P, Rice, D.W, Berrisford, J.M, Hounslow, A.M, Moir, A.J.G, Huang, H, Nathan, S, Mahadi, N.M, Farah Diba, A.B, Craven, C.J.
Deposit date:2008-06-05
Release date:2008-11-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Catalysis by Glomerella cingulata Cutinase Requires Conformational Cycling between the Active and Inactive States of Its Catalytic Triad
J.Mol.Biol., 385, 2009

224201

數據於2024-08-28公開中

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