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PDB: 2004 results

2GAZ
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BU of 2gaz by Molmil
Mycobacterial lipoglycan presentation by CD1d
Descriptor: (2R)-3-[(HYDROXY{[(2R,3R,5S,6R)-3,4,5-TRIHYDROXY-2,6-BIS(ALPHA-D-MANNOPYRANOSYLOXY)CYCLOHEXYL]OXY}PHOSPHORYL)OXY]PROPAN E-1,2-DIYL DIHEXADECANOATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, T-cell surface glycoprotein CD1d1, ...
Authors:Zajonc, D.M.
Deposit date:2006-03-09
Release date:2006-09-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural characterization of mycobacterial phosphatidylinositol mannoside binding to mouse CD1d.
J.Immunol., 177, 2006
2QC7
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BU of 2qc7 by Molmil
Crystal structure of the protein-disulfide isomerase related chaperone ERp29
Descriptor: Endoplasmic reticulum protein ERp29
Authors:Barak, N.N, Sevvana, M, Neumann, P, Malesevic, M, Naumann, K, Fischer, G, Sheldrick, G.M, Stubbs, M.T, Ferrari, D.M.
Deposit date:2007-06-19
Release date:2008-06-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure and functional analysis of the protein disulfide isomerase-related protein ERp29.
J.Mol.Biol., 385, 2009
2G6X
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BU of 2g6x by Molmil
Crystal structure of a novel green fluorescent protein from marine copepod Pontellina plumata
Descriptor: green fluorescent protein 2
Authors:Evdokimov, A.G, Pokross, M.E, Chudakov, D.M.
Deposit date:2006-02-26
Release date:2006-03-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the fast maturation of Arthropoda green fluorescent protein.
Embo Rep., 7, 2006
1LIO
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BU of 1lio by Molmil
STRUCTURE OF APO T. GONDII ADENOSINE KINASE
Descriptor: adenosine kinase
Authors:Schumacher, M.A, Scott, D.M, Mathews, I.I, Ealick, S.E, Brennan, R.G.
Deposit date:2002-04-17
Release date:2002-06-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of Toxoplasma gondii adenosine kinase reveal a novel catalytic mechanism and prodrug binding.
J.Mol.Biol., 298, 2000
4TMD
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BU of 4tmd by Molmil
X-ray structure of Putative uncharacterized protein (Rv0999 ortholog) from Mycobacterium smegmatis
Descriptor: IODIDE ION, Uncharacterized protein
Authors:Horanyi, P.S, Dranow, D.M, Abendroth, J, Lorimer, D, Edwards, T, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-06-01
Release date:2014-07-02
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structure of Putative uncharacterized protein (Rv0999 ortholog) from Mycobacterium smegmatis
To Be Published
1KYJ
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BU of 1kyj by Molmil
Tumor Associated Mucin Motif from CD43 protein
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, Leukosialin (CD43) fragment
Authors:Coltart, D.M, Williams, L.J, Glunz, P.W, Sames, D, Kuduk, S.D, Schwarz, J.B, Chen, X.-T, Royyuru, A.K, Danishefsky, S.D, Live, D.H.
Deposit date:2002-02-04
Release date:2002-02-20
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Principles of Mucin Architecture: Structural Studies on Synthetic Glycopeptides Bearing Clustered Mono-, Di-, Tri-, and Hexasaccharide Glycodomains
J.Am.Chem.Soc., 124, 2002
1KZY
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BU of 1kzy by Molmil
Crystal Structure of the 53bp1 BRCT Region Complexed to Tumor Suppressor P53
Descriptor: CELLULAR TUMOR ANTIGEN P53, TUMOR SUPPRESSOR P53-BINDING PROTEIN 1, ZINC ION
Authors:Joo, W.S, Jeffrey, P.D, Cantor, S.B, Finnin, M.S, Livingston, D.M, Pavletich, N.P.
Deposit date:2002-02-08
Release date:2002-03-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the 53BP1 BRCT region bound to p53 and its comparison to the Brca1 BRCT structure.
Genes Dev., 16, 2002
4S0V
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BU of 4s0v by Molmil
Crystal structure of the human OX2 orexin receptor bound to the insomnia drug Suvorexant
Descriptor: Human Orexin receptor type 2 fusion protein to P. abysii Glycogen Synthase, OLEIC ACID, [(7R)-4-(5-chloro-1,3-benzoxazol-2-yl)-7-methyl-1,4-diazepan-1-yl][5-methyl-2-(2H-1,2,3-triazol-2-yl)phenyl]methanone
Authors:Yin, J, Kolb, P, Mobarec, J.C, Rosenbaum, D.M.
Deposit date:2015-01-06
Release date:2015-01-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the human OX2 orexin receptor bound to the insomnia drug suvorexant.
Nature, 519, 2015
2F1F
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BU of 2f1f by Molmil
Crystal structure of the regulatory subunit of acetohydroxyacid synthase isozyme III from E. coli
Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, Acetolactate synthase isozyme III small subunit, MAGNESIUM ION, ...
Authors:Kaplun, A, Vyazmensky, M, Barak, Z, Chipman, D.M, Shaanan, B.
Deposit date:2005-11-14
Release date:2006-01-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of the Regulatory Subunit of Acetohydroxyacid Synthase Isozyme III from Escherichia coli.
J.Mol.Biol., 357, 2006
1LKO
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BU of 1lko by Molmil
Crystal structure of Desulfovibrio vulgaris rubrerythrin all-iron(II) form
Descriptor: FE (II) ION, Rubrerythrin all-iron(II) form
Authors:Jin, S, Kurtz Jr, D.M, Liu, Z.J, Rose, J, Wang, B.C.
Deposit date:2002-04-25
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:X-ray Crystal Structures of Reduced Rubrerythrin and its Azide Adduct: A Structure-Based Mechanism for a Non-Heme DiIron Peroxidase
J.Am.Chem.Soc., 124, 2002
4Q9Z
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BU of 4q9z by Molmil
Human Protein Kinase C Theta in Complex with Compound35 ((1R)-9-(AZETIDIN-3-YLAMINO)-1,8-DIMETHYL-3,5-DIHYDRO[1,2,4]TRIAZINO[3,4-C][1,4]BENZOXAZIN-2(1H)-ONE)
Descriptor: (1R)-9-(azetidin-3-ylamino)-1,8-dimethyl-3,5-dihydro[1,2,4]triazino[3,4-c][1,4]benzoxazin-2(1H)-one, HUMAN PROTEIN KINASE C THETA, SODIUM ION
Authors:Argiriadi, M.A, George, D.M.
Deposit date:2014-05-02
Release date:2014-07-02
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Discovery of Selective and Orally Bioavailable Protein Kinase C theta (PKC theta ) Inhibitors from a Fragment Hit.
J.Med.Chem., 58, 2015
2FIK
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BU of 2fik by Molmil
Structure of a microbial glycosphingolipid bound to mouse CD1d
Descriptor: (2S,3R)-3-HYDROXY-2-(TETRADECANOYLAMINO)OCTADECYL ALPHA-D-GALACTOPYRANOSIDURONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wu, D, Zajonc, D.M.
Deposit date:2005-12-29
Release date:2006-03-21
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Design of natural killer T cell activators: structure and function of a microbial glycosphingolipid bound to mouse CD1d.
Proc.Natl.Acad.Sci.Usa, 103, 2006
6Z4C
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BU of 6z4c by Molmil
The structure of the N-terminal domain of RssB from E. coli
Descriptor: Regulator of RpoS
Authors:Zeth, K, Dimce, M, Terrence, D.M, Schuenemann, V, Dougan, D.
Deposit date:2020-05-25
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insight into the RssB-Mediated Recognition and Delivery of sigma s to the AAA+ Protease, ClpXP.
Biomolecules, 10, 2020
4R0R
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BU of 4r0r by Molmil
Ebolavirus GP Prehairpin Intermediate Mimic
Descriptor: eboIZN21
Authors:Clinton, T.R, Weinstock, M.T, Jacobsen, M.T, Szabo-Fresnais, N, Pandya, M.J, Whitby, F.G, Herbert, A.S, Prugar, L.I, McKinnon, R, Hill, C.P, Welch, B.D, Dye, J.M, Eckert, D.M, Kay, M.S.
Deposit date:2014-08-01
Release date:2014-10-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Design and characterization of ebolavirus GP prehairpin intermediate mimics as drug targets.
Protein Sci., 24, 2015
2FRI
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BU of 2fri by Molmil
Horse Heart Myoglobin, Nitrite Adduct, Co-crystallized
Descriptor: Myoglobin, NITRITE ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Copeland, D.M, Soares, A.S, West, A.H, Richter-Addo, G.B.
Deposit date:2006-01-19
Release date:2006-05-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of the nitrite and nitric oxide complexes of horse heart myoglobin.
J.Inorg.Biochem., 100, 2006
7ANM
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BU of 7anm by Molmil
Nudaurelia capensis omega virus capsid: virus-like particles expressed in Nicotiana benthamiana
Descriptor: p70
Authors:Castells-Graells, R, Ribeiro, J.R.S, Domitrovic, T, Hesketh, E.L, Scarff, C.A, Johnson, J.E, Ranson, N.A, Lawson, D.M, Lomonossoff, G.P.
Deposit date:2020-10-12
Release date:2021-08-25
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Plant-expressed virus-like particles reveal the intricate maturation process of a eukaryotic virus.
Commun Biol, 4, 2021
7ATA
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BU of 7ata by Molmil
Nudaurelia capensis omega virus procapsid: virus-like particles expressed in Nicotiana benthamiana
Descriptor: p70
Authors:Castells-Graells, R, Ribeiro, J.R.S, Domitrovic, T, Hesketh, E.L, Scarff, C.A, Johnson, J.E, Ranson, N.A, Lawson, D.M, Lomonossoff, G.P.
Deposit date:2020-10-29
Release date:2021-08-25
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (6.63 Å)
Cite:Plant-expressed virus-like particles reveal the intricate maturation process of a eukaryotic virus.
Commun Biol, 4, 2021
5EOT
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BU of 5eot by Molmil
Structure of HLA-A2:01 with peptide G13E
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
Authors:Zajonc, D.M, Remesh, S.G.
Deposit date:2015-11-10
Release date:2016-12-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Unconventional Peptide Presentation by Major Histocompatibility Complex (MHC) Class I Allele HLA-A*02:01: BREAKING CONFINEMENT.
J. Biol. Chem., 292, 2017
3IG1
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BU of 3ig1 by Molmil
HIV-1 Reverse Transcriptase with the Inhibitor beta-Thujaplicinol Bound at the RNase H Active Site
Descriptor: 2,7-dihydroxy-4-(propan-2-yl)cyclohepta-2,4,6-trien-1-one, HIV-1 Reverse Transcriptase p51 subunit, HIV-1 Reverse Transcriptase p66 subunit, ...
Authors:Himmel, D.M, Maegley, K.A, Pauly, T.A, Arnold, E.
Deposit date:2009-07-27
Release date:2010-01-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of HIV-1 reverse transcriptase with the inhibitor beta-Thujaplicinol bound at the RNase H active site.
Structure, 17, 2009
4P9F
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BU of 4p9f by Molmil
E. coli McbR/YncC
Descriptor: HTH-type transcriptional regulator mcbR
Authors:Lord, D.M, Page, R, Peti, W.
Deposit date:2014-04-03
Release date:2015-01-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:McbR/YncC: Implications for the Mechanism of Ligand and DNA Binding by a Bacterial GntR Transcriptional Regulator Involved in Biofilm Formation.
Biochemistry, 53, 2014
1O87
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BU of 1o87 by Molmil
A new MgGDP complex of the Ffh NG domain
Descriptor: CHLORIDE ION, FORMIC ACID, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Freymann, D.M.
Deposit date:2002-11-25
Release date:2004-01-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Novel Protein and Mg2+ Configurations in the Mg2+Gdp Complex of the Srp Gtpase Ffh
Proteins: Struct.,Funct., Genet., 54, 2004
1NPG
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BU of 1npg by Molmil
MYOGLOBIN (HORSE HEART) WILD-TYPE COMPLEXED WITH NITROSOETHANE
Descriptor: Myoglobin, NITROSOETHANE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Copeland, D.M, West, A.H, Richter-Addo, G.B.
Deposit date:2003-01-17
Release date:2003-11-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of ferrous horse heart myoglobin complexed with nitric oxide and nitrosoethane.
Proteins, 53, 2003
1NR4
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BU of 1nr4 by Molmil
High resolution crystal structures of thymus and activation-regulated chemokine
Descriptor: SULFATE ION, Thymus and activation-regulated chemokine
Authors:Asojo, O.A, Boulegue, C, Hoover, D.M, Lu, W, Lubkowski, J.
Deposit date:2003-01-23
Release date:2003-08-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structures of thymus and activation-regulated chemokine (TARC).
Acta Crystallogr.,Sect.D, 59, 2003
2P6V
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BU of 2p6v by Molmil
Structure of TAFH domain of the human TAF4 subunit of TFIID
Descriptor: SULFATE ION, Transcription initiation factor TFIID subunit 4
Authors:Wang, X, Truckses, D.M, Takada, S, Matsumura, T, Tanese, N, Jacobson, R.H.
Deposit date:2007-03-19
Release date:2007-05-15
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conserved region I of human coactivator TAF4 binds to a short hydrophobic motif present in transcriptional regulators.
Proc.Natl.Acad.Sci.Usa, 104, 2007
1OD0
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BU of 1od0 by Molmil
Family 1 b-glucosidase from Thermotoga maritima
Descriptor: BETA-GLUCOSIDASE A
Authors:Gloster, T, Zechel, D.L, Boraston, A.B, Boraston, C.M, Macdonald, J.M, Tilbrook, D.M, Stick, R.V, Davies, G.J.
Deposit date:2003-02-12
Release date:2003-03-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Iminosugar Glycosidase Inhibitors: Structural and Thermodynamic Dissection of the Binding of Isofagomine and 1-Deoxynojirimycin to Beta-Glucosidases
J.Am.Chem.Soc., 125, 2003

238582

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