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PDB: 3048 results

5A3G
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Structure of herpesvirus nuclear egress complex subunit M50
Descriptor: M50
Authors:Leigh, K.E, Boeszoermenyi, A, Mansueto, M.S, Sharma, M, Filman, D.J, Coen, D.M, Wagner, G, Hogle, J.M, Arthanari, H.
Deposit date:2015-06-01
Release date:2015-07-15
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structure of a Herpesvirus Nuclear Egress Complex Subunit Reveals an Interaction Groove that is Essential for Viral Replication
Proc.Natl.Acad.Sci.USA, 112, 2015
3VN5
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BU of 3vn5 by Molmil
Crystal structure of Aquifex aeolicus RNase H3
Descriptor: Ribonuclease HIII
Authors:Jongruja, N, You, D.J, Eiko, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2011-12-22
Release date:2012-12-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structure and characterization of RNase H3 from Aquifex aeolicus
Febs J., 279, 2012
3UIH
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crystal structure of human Survivin in complex with Smac/DIABLO(1-15) peptide
Descriptor: Baculoviral IAP repeat-containing protein 5, Diablo homolog, mitochondrial, ...
Authors:Du, J, Patel, D.J.
Deposit date:2011-11-04
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for Recognition of H3T3ph and Smac/DIABLO N-terminal Peptides by Human Survivin.
Structure, 20, 2012
5A5V
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A complex of the synthetic siderophore analogue Fe(III)-6-LICAM with the CeuE periplasmic protein from Campylobacter jejuni
Descriptor: ENTEROCHELIN UPTAKE PERIPLASMIC BINDING PROTEIN, FE (III) ION, N,N'-hexane-1,4-diylbis(2,3-dihydroxybenzamide)
Authors:Blagova, E, Hughes, A, Moroz, O.V, Raines, D.J, Wilde, E.J, Turkenburg, J.P, Duhme-Klair, A.-K, Wilson, K.S.
Deposit date:2015-06-22
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Interactions of the periplasmic binding protein CeuE with Fe(III) n-LICAM(4-) siderophore analogues of varied linker length.
Sci Rep, 7, 2017
5A3F
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BU of 5a3f by Molmil
Crystal structure of the dynamin tetramer
Descriptor: DYNAMIN 3
Authors:Reubold, T.F, Faelber, K, Plattner, N, Posor, Y, Branz, K, Curth, U, Schlegel, J, Anand, R, Manstein, D.J, Noe, F, Haucke, V, Daumke, O, Eschenburg, S.
Deposit date:2015-05-29
Release date:2015-08-26
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Crystal Structure of the Dynamin Tetramer
Nature, 525, 2015
3ULK
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BU of 3ulk by Molmil
E. coli Ketol-acid reductoisomerase in complex with NADPH and Mg2+
Descriptor: Ketol-acid reductoisomerase, MAGNESIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Wong, S.H, Lonhienne, T.G.A, Winzor, D.J, Schenk, G, Guddat, L.W.
Deposit date:2011-11-11
Release date:2012-10-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Bacterial and plant ketol-acid reductoisomerases have different mechanisms of induced fit during the catalytic cycle
J.Mol.Biol., 424, 2012
3UIG
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BU of 3uig by Molmil
crystal structure of human Survivin in complex with T3 phosphorylated H3(1-15) peptide
Descriptor: Baculoviral IAP repeat-containing protein 5, T3 phosphorylated H3(1-15) peptide, ZINC ION
Authors:Du, J, Patel, D.J.
Deposit date:2011-11-04
Release date:2012-02-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for Recognition of H3T3ph and Smac/DIABLO N-terminal Peptides by Human Survivin.
Structure, 20, 2012
3VBH
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Crystal structure of formaldehyde treated human enterovirus 71 (space group R32)
Descriptor: CHLORIDE ION, Genome Polyprotein, capsid protein VP1, ...
Authors:Wang, X, Peng, W, Ren, J, Hu, Z, Xu, J, Lou, Z, Li, X, Yin, W, Shen, X, Porta, C, Walter, T.S, Evans, G, Axford, D, Owen, R, Rowlands, D.J, Wang, J, Stuart, D.I, Fry, E.E, Rao, Z.
Deposit date:2012-01-02
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A sensor-adaptor mechanism for enterovirus uncoating from structures of EV71.
Nat.Struct.Mol.Biol., 19, 2012
3VRS
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BU of 3vrs by Molmil
Crystal structure of fluoride riboswitch, soaked in Mn2+
Descriptor: FLUORIDE ION, Fluoride riboswitch, MANGANESE (II) ION, ...
Authors:Ren, A.M, Rajashankar, K.R, Patel, D.J.
Deposit date:2012-04-13
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.603 Å)
Cite:Fluoride ion encapsulation by Mg2+ ions and phosphates in a fluoride riboswitch.
Nature, 486, 2012
2HXM
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BU of 2hxm by Molmil
Complex of UNG2 and a small Molecule synthetic Inhibitor
Descriptor: 4-[(1E,7E)-8-(2,6-DIOXO-1,2,3,6-TETRAHYDROPYRIMIDIN-4-YL)-3,6-DIOXA-2,7-DIAZAOCTA-1,7-DIEN-1-YL]BENZOIC ACID, Uracil-DNA glycosylase
Authors:Bianchet, M.A, Krosky, D.J, Ghung, S, Seiple, L, Amzel, L.M, Stivers, J.T.
Deposit date:2006-08-03
Release date:2006-12-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Mimicking damaged DNA with a small molecule inhibitor of human UNG2.
Nucleic Acids Res., 34, 2006
3UP3
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BU of 3up3 by Molmil
Nuclear receptor DAF-12 from hookworm Ancylostoma ceylanicum in complex with (25S)-cholestenoic acid
Descriptor: (8alpha,10alpha,25S)-3-hydroxycholesta-3,5-dien-26-oic acid, 1,2-ETHANEDIOL, Nuclear receptor coactivator 2, ...
Authors:Zhi, X, Zhou, X.E, Melcher, K, Motola, D.L, Gelmedin, V, Hawdon, J, Kliewer, S.A, Mangelsdorf, D.J, Xu, H.E.
Deposit date:2011-11-17
Release date:2011-12-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural Conservation of Ligand Binding Reveals a Bile Acid-like Signaling Pathway in Nematodes.
J.Biol.Chem., 287, 2012
3VBU
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BU of 3vbu by Molmil
Crystal structure of empty human Enterovirus 71 particle
Descriptor: Genome Polyprotein, capsid protein VP0, capsid protein VP1, ...
Authors:Wang, X, Peng, W, Ren, J, Hu, Z, Xu, J, Lou, Z, Li, X, Yin, W, Shen, X, Porta, C, Walter, T.S, Evans, G, Axford, D, Owen, R, Rowlands, D.J, Wang, J, Stuart, D.I, Fry, E.E, Rao, Z.
Deposit date:2012-01-02
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (4 Å)
Cite:A sensor-adaptor mechanism for enterovirus uncoating from structures of EV71.
Nat.Struct.Mol.Biol., 19, 2012
3TCF
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BU of 3tcf by Molmil
Crystal structure of E. coli OppA complexed with endogenous ligands
Descriptor: Endogenous peptide, Periplasmic oligopeptide-binding protein
Authors:Klepsch, M.M, Kovermann, M, Low, C, Balbach, J, de Gier, J.W, Slotboom, D.J, Berntsson, R.P.-A.
Deposit date:2011-08-09
Release date:2011-10-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Escherichia coli peptide binding protein OppA has a preference for positively charged peptides.
J.Mol.Biol., 414, 2011
5AMM
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BU of 5amm by Molmil
Structure of Leishmania major peroxidase D211N mutant
Descriptor: ASCORBATE PEROXIDASE, CALCIUM ION, POTASSIUM ION, ...
Authors:Chreifi, G, Fields, J.B, Hollingsworth, S.A, Heyden, M, Arce, A.P, Magana-Garcia, H.I, Poulos, T.L, Tobias, D.J.
Deposit date:2015-03-11
Release date:2015-12-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:"Bind and Crawl" Association Mechanism of Leishmania Major Peroxidase and Cytochrome C Revealed by Brownian and Molecular Dynamics Simulations.
Biochemistry, 54, 2015
5BU6
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BU of 5bu6 by Molmil
Structure of BpsB deaceylase domain from Bordetella bronchiseptica
Descriptor: 1,2-ETHANEDIOL, BpsB (PgaB), Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase, ...
Authors:Little, D.J, Bamford, N.C, Howell, P.L.
Deposit date:2015-06-03
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.951 Å)
Cite:The Protein BpsB Is a Poly-beta-1,6-N-acetyl-d-glucosamine Deacetylase Required for Biofilm Formation in Bordetella bronchiseptica.
J.Biol.Chem., 290, 2015
3TJ3
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BU of 3tj3 by Molmil
Structure of importin a5 bound to the N-terminus of Nup50
Descriptor: Importin subunit alpha-1, Nuclear pore complex protein Nup50
Authors:Pumroy, R, Nardozzi, J.D, Hart, D.J, Root, M.J, Cingolani, G.
Deposit date:2011-08-23
Release date:2011-11-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Nucleoporin Nup50 stabilizes closed conformation of armadillo repeat 10 in importin alpha 5.
J.Biol.Chem., 287, 2012
3TCH
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BU of 3tch by Molmil
Crystal structure of E. coli OppA in an open conformation
Descriptor: Periplasmic oligopeptide-binding protein
Authors:Klepsch, M.M, Kovermann, M, Low, C, Balbach, J, de Gier, J.W, Slotboom, D.J, Berntsson, R.P.-A.
Deposit date:2011-08-09
Release date:2011-10-12
Last modified:2012-01-11
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Escherichia coli peptide binding protein OppA has a preference for positively charged peptides.
J.Mol.Biol., 414, 2011
3SOX
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BU of 3sox by Molmil
Structure of UHRF1 PHD finger in the free form
Descriptor: E3 ubiquitin-protein ligase UHRF1, ZINC ION
Authors:Rajakumara, E, Patel, D.J.
Deposit date:2011-06-30
Release date:2011-08-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6501 Å)
Cite:PHD Finger Recognition of Unmodified Histone H3R2 Links UHRF1 to Regulation of Euchromatic Gene Expression.
Mol.Cell, 43, 2011
3UIK
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BU of 3uik by Molmil
crystal structure of human Survivin mutant K62Y/H80W in complex with H3(1-10) peptide
Descriptor: Baculoviral IAP repeat-containing protein 5, ZINC ION, histone H3(1-10) peptide
Authors:Du, J, Patel, D.J.
Deposit date:2011-11-04
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Structural Basis for Recognition of H3T3ph and Smac/DIABLO N-terminal Peptides by Human Survivin.
Structure, 20, 2012
3UIJ
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BU of 3uij by Molmil
Crystal structure of human Survivin K62Y/H80W mutant in complex with Smac/DIABLO(1-15) peptide
Descriptor: Baculoviral IAP repeat-containing protein 5, Diablo homolog, mitochondrial, ...
Authors:Du, J, Patel, D.J.
Deposit date:2011-11-04
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.705 Å)
Cite:Structural Basis for Recognition of H3T3ph and Smac/DIABLO N-terminal Peptides by Human Survivin.
Structure, 20, 2012
3TOS
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BU of 3tos by Molmil
Crystal Structure of CalS11, Calicheamicin Methyltransferase
Descriptor: 1,2-ETHANEDIOL, CalS11, GLUTAMIC ACID, ...
Authors:Chang, A, Aceti, D.J, Beebe, E.T, Makino, S.-I, Wrobel, R.L, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2011-09-06
Release date:2011-10-05
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of CalS11, Calicheamicin methyltransferase
To be Published
1CNL
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BU of 1cnl by Molmil
ALPHA-CONOTOXIN IMI
Descriptor: PROTEIN (ALPHA-CONOTOXIN IMI)
Authors:Gehrmann, J, Daly, N.L, Craik, D.J.
Deposit date:1999-05-20
Release date:1999-05-27
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of alpha-conotoxin ImI by 1H nuclear magnetic resonance.
J.Med.Chem., 42, 1999
1D83
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BU of 1d83 by Molmil
STRUCTURE REFINEMENT OF THE CHROMOMYCIN DIMER/DNA OLIGOMER COMPLEX IN SOLUTION
Descriptor: (1S)-5-deoxy-1-O-methyl-1-C-[(2R,3S)-3,5,7,10-tetrahydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-D-xylulose, 2,6-dideoxy-4-O-methyl-alpha-D-galactopyranose-(1-3)-(2R,3R,6R)-6-hydroxy-2-methyltetrahydro-2H-pyran-3-yl acetate, 3-C-methyl-4-O-acetyl-alpha-L-Olivopyranose-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol, ...
Authors:Gao, X, Mirau, P, Patel, D.J.
Deposit date:1992-07-22
Release date:1993-07-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure refinement of the chromomycin dimer-DNA oligomer complex in solution.
J.Mol.Biol., 223, 1992
1CE3
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BU of 1ce3 by Molmil
PUTATIVE ANCESTRAL PROTEIN ENCODED BY A SINGLE SEQUENCE REPEAT OF THE MULTIDOMAIN PROTEINASE INHIBITOR FROM NICOTIANA ALATA
Descriptor: API
Authors:Scanlon, M.J, Lee, M.C.S, Anderson, M.A, Craik, D.J.
Deposit date:1999-03-14
Release date:1999-03-27
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Structure of a putative ancestral protein encoded by a single sequence repeat from a multidomain proteinase inhibitor gene from Nicotiana alata.
Structure Fold.Des., 7, 1999
1DDK
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BU of 1ddk by Molmil
CRYSTAL STRUCTURE OF IMP-1 METALLO BETA-LACTAMASE FROM PSEUDOMONAS AERUGINOSA
Descriptor: ACETIC ACID, IMP-1 METALLO BETA-LACTAMASE, ZINC ION
Authors:Concha, N.O, Janson, C.A, Rowling, P, Pearson, S, Cheever, C.A, Clarke, B.P, Lewis, C, Galleni, M, Frere, J.M, Payne, D.J, Bateson, J.H, Abdel-Meguid, S.S.
Deposit date:1999-11-10
Release date:2000-11-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of the IMP-1 metallo beta-lactamase from Pseudomonas aeruginosa and its complex with a mercaptocarboxylate inhibitor: binding determinants of a potent, broad-spectrum inhibitor.
Biochemistry, 39, 2000

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