Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 22322 results

3Q66
DownloadVisualize
BU of 3q66 by Molmil
Structure of the Vps75-Rtt109 histone chaperone-lysine acetyltransferase complex (Full-length proteins in space group P6122)
Descriptor: Histone acetyltransferase RTT109, SULFATE ION, Vacuolar protein sorting-associated protein 75
Authors:Su, D, Thompson, J.R, Mer, G.
Deposit date:2010-12-30
Release date:2011-03-23
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.705 Å)
Cite:Structure and histone binding properties of the Vps75-Rtt109 chaperone-lysine acetyltransferase complex.
J.Biol.Chem., 286, 2011
3Q7J
DownloadVisualize
BU of 3q7j by Molmil
Engineered Thermoplasma Acidophilum F3 factor mimics human aminopeptidase N (APN) as a target for anticancer drug development
Descriptor: L-phenylalanyl-N6-[(benzyloxy)carbonyl]-N1-hydroxy-L-lysinamide, Tricorn protease-interacting factor F3, ZINC ION
Authors:Su, J, Wang, Q, Feng, J, Zhang, C, Zhu, D, We, T, Xu, W, Gu, L.
Deposit date:2011-01-05
Release date:2011-07-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Engineered Thermoplasma acidophilum factor F3 mimics human aminopeptidase N (APN) as a target for anticancer drug development
Bioorg.Med.Chem., 19, 2011
3QNF
DownloadVisualize
BU of 3qnf by Molmil
Crystal structure of the open state of human endoplasmic reticulum aminopeptidase 1 ERAP1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Endoplasmic reticulum aminopeptidase 1, ZINC ION, ...
Authors:Vollmar, M, Kochan, G, Krojer, T, Harvey, D, Chaikuad, A, Allerston, C, Muniz, J.R.C, Raynor, J, Ugochukwu, E, Berridge, G, Wordsworth, B.P, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Kavanagh, K, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2011-02-08
Release date:2011-02-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of the endoplasmic reticulum aminopeptidase-1 (ERAP1) reveal the molecular basis for N-terminal peptide trimming.
Proc.Natl.Acad.Sci.USA, 108, 2011
3RRU
DownloadVisualize
BU of 3rru by Molmil
X-ray crystal structure of the VHS domain of human TOM1-like protein, Northeast Structural Genomics Consortium Target HR3050E
Descriptor: TOM1L1 protein
Authors:Forouhar, F, Lew, S, Seetharaman, J, Wang, H, Ciccosanti, C, Patel, D, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-04-30
Release date:2011-06-08
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:X-ray crystal structure of the VHS domain of human TOM1-like protein, Northeast Structural Genomics Consortium Target HR3050E
To be Published
3RD4
DownloadVisualize
BU of 3rd4 by Molmil
Crystal structure of PROPEN_03304 from Proteus penneri ATCC 35198 Northeast Structural Genomics Consortium target id PvR55
Descriptor: uncharacterized protein
Authors:Seetharaman, J, Min, S, Kuzin, A, Wang, D, Ciccosanti, C, Sahdev, S, Nair, R, Rost, B, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-03-31
Release date:2011-05-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of PROPEN_03304 from Proteus penneri ATCC 35198 Northeast Structural Genomics Consortium target id PvR55
To be Published
3RBC
DownloadVisualize
BU of 3rbc by Molmil
Bullfrog M ferritin with iron(III) bound to the ferroxidase site
Descriptor: FE (III) ION, Ferritin, middle subunit
Authors:Bertini, I, Lalli, D, Mangani, S, Pozzi, C, Rosa, C, Turano, P.
Deposit date:2011-03-29
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural insights into the ferroxidase site of ferritins from higher eukaryotes.
J.Am.Chem.Soc., 134, 2012
3REU
DownloadVisualize
BU of 3reu by Molmil
Crystal structure of the archaeal asparagine synthetase A complexed with L-Aspartic acid and Adenosine triphosphate
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ASPARTIC ACID, AsnS-like asparaginyl-tRNA synthetase related protein, ...
Authors:Blaise, M, Frechin, M, Charron, C, Roy, H, Sauter, C, Lorber, B, Olieric, V, Kern, D.
Deposit date:2011-04-05
Release date:2011-08-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of the Archaeal Asparagine Synthetase: Interrelation with Aspartyl-tRNA and Asparaginyl-tRNA Synthetases.
J.Mol.Biol., 412, 2011
3TW8
DownloadVisualize
BU of 3tw8 by Molmil
GEF domain of DENND 1B in complex with Rab GTPase Rab35
Descriptor: DENN domain-containing protein 1B, Ras-related protein Rab-35
Authors:Wu, X.D, Kummel, D, Reinisch, K.M.
Deposit date:2011-09-21
Release date:2011-11-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Insights regarding guanine nucleotide exchange from the structure of a DENN-domain protein complexed with its Rab GTPase substrate.
Proc.Natl.Acad.Sci.USA, 108, 2011
3U8X
DownloadVisualize
BU of 3u8x by Molmil
Crystal Structure of a chimera containing the N-terminal domain (residues 8-29) of drosophila Ciboulot and the C-terminal domain (residues 18-44) of bovine Thymosin-beta4, bound to G-actin-ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Renault, L, Husson, C, Carlier, M.F, Didry, D.
Deposit date:2011-10-17
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:How a single residue in individual beta-thymosin/WH2 domains controls their functions in actin assembly
Embo J., 31, 2012
3TVL
DownloadVisualize
BU of 3tvl by Molmil
Complex between the human thiamine triphosphatase and triphosphate
Descriptor: 1,2-ETHANEDIOL, TRIPHOSPHATE, Thiamine-triphosphatase
Authors:Delvaux, D, Herman, R, Sauvage, E, Wins, P, Bettendorff, L, Charlier, P, Kerff, F.
Deposit date:2011-09-20
Release date:2012-10-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural determinants of specificity and catalytic mechanism in mammalian 25-kDa thiamine triphosphatase.
Biochim.Biophys.Acta, 1830, 2013
3TU1
DownloadVisualize
BU of 3tu1 by Molmil
Exhaustive Fluorine Scanning towards Potent p53-MDM2 Antagonist
Descriptor: 3-[(1S)-2-(tert-butylamino)-1-{N-[(3,4-difluorophenyl)methyl]formamido}-2-oxoethyl]-6-chloro-1H-indole-2-carboxylic acid, E3 ubiquitin-protein ligase Mdm2
Authors:Wolf, S, Huang, Y, Koes, D, Popowicz, G.M, Camacho, C.J, Holak, T.A, Doemling, A.
Deposit date:2011-09-15
Release date:2011-11-02
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.603 Å)
Cite:Exhaustive Fluorine Scanning toward Potent p53-Mdm2 Antagonists.
Chemmedchem, 7, 2012
3U8K
DownloadVisualize
BU of 3u8k by Molmil
Crystal structure of the acetylcholine binding protein (AChBP) from Lymnaea stagnalis in complex with NS3573 (1-(5-ethoxypyridin-3-yl)-1,4-diazepane)
Descriptor: 1-(5-ethoxypyridin-3-yl)-1,4-diazepane, 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholine-binding protein, ...
Authors:Rohde, L.A.H, Ahring, P.K, Jensen, M.L, Nielsen, E.O, Peters, D, Helgstrand, C, Krintel, C, Harpsoe, K, Gajhede, M, Kastrup, J.S, Balle, T.
Deposit date:2011-10-17
Release date:2011-12-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Intersubunit bridge formation governs agonist efficacy at nicotinic acetylcholine alpha 4 beta 2 receptors: unique role of halogen bonding revealed.
J.Biol.Chem., 287, 2012
3TRU
DownloadVisualize
BU of 3tru by Molmil
Crystal structure of the complex of peptidoglycan recognition protein with cellular metabolite chorismate at 3.2 A resolution
Descriptor: (3R,4R)-3-[(1-carboxyethenyl)oxy]-4-hydroxycyclohexa-1,5-diene-1-carboxylic acid, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Dube, D, Sharma, P, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-09-10
Release date:2011-09-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of the complex of peptidoglycan recognition protein with cellular metabolite chorismate at 3.2 A resolution
To be Published
3TT8
DownloadVisualize
BU of 3tt8 by Molmil
Crystal Structure Analysis of Cu Human Insulin Derivative
Descriptor: COPPER (II) ION, INSULIN A-CHAIN, INSULIN B-CHAIN
Authors:Prugovecki, B, Matkovic-Calogovic, D.
Deposit date:2011-09-14
Release date:2011-10-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Crystal Structure Analysis of Cu Human Insulin Derivative
To be Published
3TSJ
DownloadVisualize
BU of 3tsj by Molmil
Crystal structure of Phl p 4, a grass pollen allergen with glucose dehydrogenase activity
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, Pollen allergen Phl p 4, SODIUM ION, ...
Authors:Zafred, D, Nandy, A, Keller, W.
Deposit date:2011-09-13
Release date:2012-09-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure and immunologic characterization of the major grass pollen allergen Phl p 4.
J. Allergy Clin. Immunol., 132, 2013
3TVJ
DownloadVisualize
BU of 3tvj by Molmil
Catalytic fragment of MASP-2 in complex with its specific inhibitor developed by directed evolution on SGCI scaffold
Descriptor: Mannan-binding lectin serine protease 2 A chain, Mannan-binding lectin serine protease 2 B chain, Protease inhibitor SGPI-2, ...
Authors:Heja, D, Harmat, V, Dobo, J, Szasz, R, Kekesi, K.A, Zavodszky, P, Gal, P, Pal, G.
Deposit date:2011-09-20
Release date:2012-04-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Monospecific Inhibitors Show That Both Mannan-binding Lectin-associated Serine Protease-1 (MASP-1) and -2 Are Essential for Lectin Pathway Activation and Reveal Structural Plasticity of MASP-2.
J.Biol.Chem., 287, 2012
3U3W
DownloadVisualize
BU of 3u3w by Molmil
Crystal Structure of Bacillus thuringiensis PlcR in complex with the peptide PapR7 and DNA
Descriptor: 5'-D(P*AP*TP*AP*TP*GP*AP*AP*AP*TP*AP*TP*TP*GP*CP*AP*TP*AP*G)-3', 5'-D(P*CP*TP*AP*TP*GP*CP*AP*AP*TP*AP*TP*TP*TP*CP*AP*TP*AP*T)-3', C-terminus heptapeptide from PapR protein, ...
Authors:Grenha, R, Slamti, L, Bouillaut, L, Lereclus, D, Nessler, S.
Deposit date:2011-10-06
Release date:2013-01-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the activation mechanism of the PlcR virulence regulator by the quorum-sensing signal peptide PapR.
Proc.Natl.Acad.Sci.USA, 110, 2013
3U8N
DownloadVisualize
BU of 3u8n by Molmil
Crystal structure of the acetylcholine binding protein (AChBP) from Lymnaea stagnalis in complex with NS3950 (1-(6-bromo-5-ethoxypyridin-3-yl)-1,4-diazepane)
Descriptor: 1-(6-bromo-5-ethoxypyridin-3-yl)-1,4-diazepane, 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholine-binding protein, ...
Authors:Rohde, L.A.H, Ahring, P.K, Jensen, M.L, Nielsen, E.O, Peters, D, Helgstrand, C, Krintel, C, Harpsoe, K, Gajhede, M, Kastrup, J.S, Balle, T.
Deposit date:2011-10-17
Release date:2011-12-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Intersubunit bridge formation governs agonist efficacy at nicotinic acetylcholine alpha 4 beta 2 receptors: unique role of halogen bonding revealed.
J.Biol.Chem., 287, 2012
3UBV
DownloadVisualize
BU of 3ubv by Molmil
Oxygen-bound hell's gate globin I by classical hanging drop
Descriptor: Hemoglobin-like flavoprotein, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Scudieri, D, Belmonte, L, Saito, J.A, Alam, M, Nicolini, C, Pechkova, E.
Deposit date:2011-10-25
Release date:2012-03-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Oxygen-bound Hell's gate globin I by classical versus LB nanotemplate method.
J.Cell.Biochem., 8, 2012
3TVV
DownloadVisualize
BU of 3tvv by Molmil
Structure of the tandem PH domains of Rtt106 (residues 68-315)
Descriptor: Histone chaperone RTT106
Authors:Su, D, Thompson, J.R, Mer, G.
Deposit date:2011-09-20
Release date:2012-02-01
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.589 Å)
Cite:Structural basis for recognition of H3K56-acetylated histone H3-H4 by the chaperone Rtt106.
Nature, 483, 2012
3UG0
DownloadVisualize
BU of 3ug0 by Molmil
Crystal structure of a Trp-less green fluorescent protein translated by the simplified genetic code
Descriptor: Green fluorescent protein
Authors:Kawahara-Kobayashi, A, Araiso, Y, Matsuda, T, Yokoyama, S, Kigawa, T, Nureki, O, Kiga, D.
Deposit date:2011-11-02
Release date:2012-10-17
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.093 Å)
Cite:Simplification of the genetic code: restricted diversity of genetically encoded amino acids.
Nucleic Acids Res., 40, 2012
3UH0
DownloadVisualize
BU of 3uh0 by Molmil
Crystal structure of the yeast mitochondrial threonyl-tRNA synthetase (MST1) in complex with threonyl sulfamoyl adenylate
Descriptor: 5'-O-(N-(L-THREONYL)-SULFAMOYL)ADENOSINE, SULFATE ION, Threonyl-tRNA synthetase, ...
Authors:Peterson, K.M, Ling, J, Simonovic, I, Cho, C, Soll, D, Simonovic, M.
Deposit date:2011-11-03
Release date:2012-02-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Yeast mitochondrial threonyl-tRNA synthetase recognizes tRNA isoacceptors by distinct mechanisms and promotes CUN codon reassignment.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UIB
DownloadVisualize
BU of 3uib by Molmil
Map kinase LMAMPK10 from leishmania major in complex with SB203580
Descriptor: 4-[5-(4-FLUORO-PHENYL)-2-(4-METHANESULFINYL-PHENYL)-3H-IMIDAZOL-4-YL]-PYRIDINE, mitogen-activated protein kinase
Authors:Horjales, S, Schmidt-Arras, D, Leclercq, O, Spath, G, Buschiazzo, A.
Deposit date:2011-11-04
Release date:2012-09-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:The Crystal Structure of the MAP Kinase LmaMPK10 from Leishmania Major Reveals Parasite-Specific Features and Regulatory Mechanisms.
Structure, 20, 2012
4ONK
DownloadVisualize
BU of 4onk by Molmil
[Leu-5]-Enkephalin mutant - YVVFL
Descriptor: [Leu-5]-Enkephalin mutant - YVVFL
Authors:Sangwan, S, Eisenberg, D, Sawaya, M.R, Do, T.D, Bowers, M.T, Lapointe, N.E, Teplow, D.B, Feinstein, S.C.
Deposit date:2014-01-28
Release date:2014-07-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Factors that drive Peptide assembly from native to amyloid structures: experimental and theoretical analysis of [leu-5]-enkephalin mutants.
J.Phys.Chem.B, 118, 2014
4OLR
DownloadVisualize
BU of 4olr by Molmil
[Leu-5]-Enkephalin mutant - YVVFV
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, [Leu-5]-Enkephalin mutant - YVVFV
Authors:Sangwan, S, Eisenberg, D, Sawaya, M.R, Do, T.D, Bowers, M.T, Lapointe, N.E, Teplow, D.B, Feinstein, S.C.
Deposit date:2014-01-24
Release date:2014-07-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Factors that drive Peptide assembly from native to amyloid structures: experimental and theoretical analysis of [leu-5]-enkephalin mutants.
J.Phys.Chem.B, 118, 2014

224004

數據於2024-08-21公開中

PDB statisticsPDBj update infoContact PDBjnumon