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PDB: 22322 件

8ELS
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HRAS R97A Crystal Form 1 R-state
分子名称: CALCIUM ION, GTPase HRas, MAGNESIUM ION, ...
著者Davis, D, Johnson, C.W, Mattos, C.
登録日2022-09-26
公開日2023-09-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.267 Å)
主引用文献Allosteric site variants affect GTP hydrolysis on Ras.
Protein Sci., 32, 2023
6OPC
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Cdc48 Hexamer in a complex with substrate and Shp1(Ubx Domain)
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Cell division control protein 48, ...
著者Cooney, I, Han, H, Stewart, M, Carson, R.H, Hansen, D, Price, J.C, Hill, C.P, Shen, P.S.
登録日2019-04-24
公開日2019-07-10
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure of the Cdc48 segregase in the act of unfolding an authentic substrate.
Science, 365, 2019
5XYI
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Small subunit of Trichomonas vaginalis ribosome
分子名称: 18S, 40S ribosomal protein S13, putative, ...
著者Li, Z, Guo, Q, Zheng, L, Ji, Y, Xie, Y, Lai, D, Lun, Z, Suo, X, Gao, N.
登録日2017-07-08
公開日2017-08-30
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Cryo-EM structures of the 80S ribosomes from human parasites Trichomonas vaginalis and Toxoplasma gondii
Cell Res., 27, 2017
5XXU
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BU of 5xxu by Molmil
Small subunit of Toxoplasma gondii ribosome
分子名称: 18S RNA, Ribosomal protein eL41, Ribosomal protein eS1, ...
著者LI, Z, Guo, Q, Zheng, L, Ji, Y, Xie, Y, Lai, D, Lun, Z, Suo, X, Gao, N.
登録日2017-07-05
公開日2017-08-30
最終更新日2018-10-24
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Cryo-EM structures of the 80S ribosomes from human parasites Trichomonas vaginalis and Toxoplasma gondii
Cell Res., 27, 2017
8FJD
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BU of 8fjd by Molmil
Structure of chlorophyllase from Triticum aestivum
分子名称: CALCIUM ION, Chlorophyllase
著者Boggs, D, Jo, M, Bridwell-Rabb, J.
登録日2022-12-19
公開日2023-02-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (4.46 Å)
主引用文献A structure-function analysis of chlorophyllase reveals a mechanism for activity regulation dependent on disulfide bonds.
J.Biol.Chem., 299, 2023
8FD8
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BU of 8fd8 by Molmil
human 15-PGDH with NADH bound
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 15-hydroxyprostaglandin dehydrogenase [NAD(+)]
著者Huang, W, Taylor, D.
登録日2022-12-02
公開日2023-03-08
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Small molecule inhibitors of 15-PGDH exploit a physiologic induced-fit closing system.
Nat Commun, 14, 2023
8F8X
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BU of 8f8x by Molmil
Crystal structure of Nb.X0 bound to the afucosylated human IgG1 fragment crystal form II
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nb.X0, Uncharacterized protein DKFZp686C11235
著者Goldgur, Y, Ravetch, J, Gupta, A, Kao, K, Oren, D.
登録日2022-11-22
公開日2023-03-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Mechanism of glycoform specificity and in vivo protection by an anti-afucosylated IgG nanobody.
Nat Commun, 14, 2023
8HW5
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BU of 8hw5 by Molmil
Crystal structure of African swine fever virus CP312R
分子名称: ACETIC ACID, CP312R
著者Wang, W.M, Wang, Z.Y, Fu, D, Guo, Y.
登録日2022-12-29
公開日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献African swine fever virus CP312R is essential for virus replication and inhibits host protein expression by interacting with RPS27A
To Be Published
8G1N
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BU of 8g1n by Molmil
Structure of Campylobacter concisus PglC I57M/Q175M Variant with modeled C-terminus
分子名称: DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE, MAGNESIUM ION, N,N'-diacetylbacilliosaminyl-1-phosphate transferase, ...
著者Dodge, G.J, Ray, L.C, Das, D, Imperiali, B, Allen, K.N.
登録日2023-02-02
公開日2023-05-31
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Co-conserved sequence motifs are predictive of substrate specificity in a family of monotopic phosphoglycosyl transferases.
Protein Sci., 32, 2023
8FG1
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Human diaphanous inhibitory domain bound to diaphanous autoregulatory domain
分子名称: Protein diaphanous homolog 1
著者Ramirez, L.M.S, Theophall, G, Premo, A, Manigrasso, M, Yepuri, G, Burz, D, Ramasamy, R, Schmidt, A.M, Shekhtman, A.
登録日2022-12-12
公開日2023-10-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Disruption of the productive encounter complex results in dysregulation of DIAPH1 activity.
J.Biol.Chem., 299, 2023
6PQ5
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BU of 6pq5 by Molmil
AGAAAA segment 113-118 from human prion
分子名称: MALONATE ION, Major prion protein
著者Apostol, M.I, Sawaya, M.R, Eisenberg, D.
登録日2019-07-08
公開日2020-04-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Cryo-EM structure of a human prion fibril with a hydrophobic, protease-resistant core.
Nat.Struct.Mol.Biol., 27, 2020
5WMJ
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BU of 5wmj by Molmil
KVWGSI segment from Superoxide Dismutase 1,residues 30-35
分子名称: Superoxide dismutase [Cu-Zn], trifluoroacetic acid
著者Sangwan, S, Sawaya, M, Eisenberg, D.
登録日2017-07-28
公開日2018-03-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Atomic structures of corkscrew-forming segments of SOD1 reveal varied oligomer conformations.
Protein Sci., 27, 2018
5VND
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BU of 5vnd by Molmil
Crystal structure of FGFR1-Y563C (FGFR4 surrogate) covalently bound to H3B-6527
分子名称: 1,2-ETHANEDIOL, Fibroblast growth factor receptor 1, N-{2-[(6-{[(2,6-dichloro-3,5-dimethoxyphenyl)carbamoyl](methyl)amino}pyrimidin-4-yl)amino]-5-(4-ethylpiperazin-1-yl)phenyl}propanamide, ...
著者Tsai, J.H.C, Reynolds, D, Fekkes, P, Smith, P, Larsen, N.A.
登録日2017-04-30
公開日2017-05-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献H3B-6527 Is a Potent and Selective Inhibitor of FGFR4 in FGF19-Driven Hepatocellular Carcinoma.
Cancer Res., 77, 2017
8IKJ
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BU of 8ikj by Molmil
Cryo-EM structure of the inactive CD97
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Adhesion G protein-coupled receptor E5,Soluble cytochrome b562,Adhesion G protein-coupled receptor E5 subunit beta
著者Mao, C, Zhao, R, Dong, Y, Gao, M, Chen, L, Zhang, C, Xiao, P, Guo, J, Qin, J, Shen, D, Ji, S, Zang, S, Zhang, H, Wang, W, Shen, Q, Sun, P, Zhang, Y.
登録日2023-02-28
公開日2024-02-14
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Conformational transitions and activation of the adhesion receptor CD97.
Mol.Cell, 84, 2024
6PFM
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BU of 6pfm by Molmil
Crystal structure of GDC-0927 bound to estrogen receptor alpha
分子名称: (2S)-2-(4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-3-(3-hydroxyphenyl)-4-methyl-2H-1-benzopyran-6-ol, Estrogen receptor
著者Kiefer, J.R, Vinogradova, M, Liang, J, Zhang, B, Wang, X, Zbieg, J.R, Labadie, S.S, Li, J, Ray, N.C, Ortwine, D.
登録日2019-06-21
公開日2019-07-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Discovery of a C-8 hydroxychromene as a potent degrader of estrogen receptor alpha with improved rat oral exposure over GDC-0927.
Bioorg.Med.Chem.Lett., 29, 2019
5YPI
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BU of 5ypi by Molmil
Crystal structure of NDM-1 bound to hydrolyzed imipenem representing an EI1 complex
分子名称: (2R)-2-[(2S,3R)-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-(2-methanimidamidoethylsulfanyl)-2,3-dihydro-1H-pyrrole -5-carboxylic acid, CHLORIDE ION, GLYCEROL, ...
著者Feng, H, Wang, D, Liu, W.
登録日2017-11-01
公開日2018-02-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The mechanism of NDM-1-catalyzed carbapenem hydrolysis is distinct from that of penicillin or cephalosporin hydrolysis.
Nat Commun, 8, 2017
5YGR
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BU of 5ygr by Molmil
Crystal structure of PLP bound Diaminopropionate ammonia lyase from Salmonella typhimurium
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Diaminopropionate ammonia lyase, ...
著者Geeta, D, Shveta, B, Shavithri, H.S, Murthy, M.R.N.
登録日2017-09-25
公開日2018-03-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Comparative structural and enzymatic studies on Salmonella typhimurium diaminopropionate ammonia lyase reveal its unique features
J. Struct. Biol., 202, 2018
5YPK
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BU of 5ypk by Molmil
Crystal structure of NDM-1 bound to hydrolyzed imipenem representing an EI2 complex
分子名称: (2R,4S)-2-[(1S,2R)-1-carboxy-2-hydroxypropyl]-4-[(2-{[(Z)-iminomethyl]amino}ethyl)sulfanyl]-3,4-dihydro-2H-pyrrole-5-ca rboxylic acid, CHLORIDE ION, Metallo-beta-lactamase NDM-1, ...
著者Feng, H, Wang, D, Liu, W.
登録日2017-11-02
公開日2018-02-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The mechanism of NDM-1-catalyzed carbapenem hydrolysis is distinct from that of penicillin or cephalosporin hydrolysis.
Nat Commun, 8, 2017
8GAH
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BU of 8gah by Molmil
CLC-ec1 L25C/A450C/C85A at pH 4.5 100mM Cl Twist
分子名称: CHLORIDE ION, H(+)/Cl(-) exchange transporter ClcA
著者Fortea, E, Lee, S, Argyos, Y, Chadda, R, Ciftci, D, Huysmans, G, Robertson, J.L, Boudker, O, Accardi, A.
登録日2023-02-22
公開日2024-02-07
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis of pH-dependent activation in a CLC transporter.
Nat.Struct.Mol.Biol., 31, 2024
5X0S
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BU of 5x0s by Molmil
Solution NMR structure of peptide toxin SsTx from Scolopendra subspinipes mutilans
分子名称: SsTx
著者Wu, F, Luo, L, Qu, D, Zhang, L, Tian, C, Lai, R.
登録日2017-01-23
公開日2018-01-24
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Centipedes subdue giant prey by blocking KCNQ channels
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5WPN
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BU of 5wpn by Molmil
Zn-bound Structure of Chaetopterus variopedatus Ferritin
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者De Meulenaere, E, Bailey, J.B, Tezcan, F.A, Deheyn, D.
登録日2017-08-05
公開日2017-12-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献First biochemical and crystallographic characterization of a fast-performing ferritin from a marine invertebrate.
Biochem. J., 474, 2017
8GA5
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CLC-ec1 L25C/A450C/C85A at pH 4.5 100mM Cl Intermediate
分子名称: CHLORIDE ION, H(+)/Cl(-) exchange transporter ClcA
著者Fortea, E, Lee, S, Argyos, Y, Chadda, R, Ciftci, D, Huysmans, G, Robertson, J.L, Boudker, O, Accardi, A.
登録日2023-02-22
公開日2024-02-07
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural basis of pH-dependent activation in a CLC transporter.
Nat.Struct.Mol.Biol., 31, 2024
6PQA
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BU of 6pqa by Molmil
GAVVGG segment 119-124 from human prion
分子名称: Major prion protein
著者Apostol, M.I, Sawaya, M.R, Eisenberg, D.
登録日2019-07-08
公開日2020-04-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Cryo-EM structure of a human prion fibril with a hydrophobic, protease-resistant core.
Nat.Struct.Mol.Biol., 27, 2020
8G5B
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BU of 8g5b by Molmil
Influenza A H3N2 X-31 Hemagglutinin in complex with FL-1061
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, FL-1061 heavy chain, FL-1061 light chain, ...
著者Windsor, I.W, Thornlow, D, Schmidt, A.G.
登録日2023-02-12
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Fabs elicited by hyperglycosylated immunogen
To Be Published
8G5A
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BU of 8g5a by Molmil
X-31 hemagglutinin in complex with FL-1061 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, FL-1086 Fab heavy chain, FL-1086 light chain, ...
著者Windsor, I.W, Thornlow, D, Schmidt, A.G.
登録日2023-02-12
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Antibodies elicited by a hyperglycoslated immunogen
To Be Published

224004

件を2024-08-21に公開中

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