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PDB: 22202 results

7XQT
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BU of 7xqt by Molmil
The structure of FLA-K*00701/KP-FECV-11
Descriptor: Beta-2-microglobulin, MHC class I antigen alpha chain, peptide from Spike glycoprotein
Authors:Qiao, P.W, Yue, C, Peng, W.Y, Liu, K.F, Huo, S.T, Zhang, D, Chai, Y, Qi, J.X, Sun, Z.Y, Gao, G.F, Liu, W.J, Wu, G.Z.
Deposit date:2022-05-08
Release date:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Analysis of the characteristics of feline major histocompatibility complex class I molecules cross-presenting coronavirus peptides
To Be Published
6BOX
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BU of 6box by Molmil
Structure of the S. pombe Clr4 catalytic domain bound to SAH
Descriptor: Histone-lysine N-methyltransferase, H3 lysine-9 specific, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Currie, M.A, Moazed, D.
Deposit date:2017-11-21
Release date:2018-07-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.412 Å)
Cite:Automethylation-induced conformational switch in Clr4 (Suv39h) maintains epigenetic stability.
Nature, 560, 2018
3WXY
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BU of 3wxy by Molmil
Crystal structure of CsyB complexed with CoA-SH
Descriptor: COENZYME A, Putative uncharacterized protein csyB
Authors:Mori, T, Yang, D, Matsui, T, Morita, H, Fujii, I, Abe, I.
Deposit date:2014-08-13
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.706 Å)
Cite:Structural basis for the formation of acylalkylpyrones from two beta-ketoacyl units by the fungal type III polyketide synthase CsyB.
J.Biol.Chem., 290, 2015
6BQL
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BU of 6bql by Molmil
Crystal Structure of the Human CAMKK2B in complex with TAE-226
Descriptor: 1,2-ETHANEDIOL, 2-({5-CHLORO-2-[(2-METHOXY-4-MORPHOLIN-4-YLPHENYL)AMINO]PYRIMIDIN-4-YL}AMINO)-N-METHYLBENZAMIDE, ACETATE ION, ...
Authors:Counago, R.M, de Souza, G.P, dos Reis, C.V, Ramos, P.Z, Drewry, D, Massirer, K.B, Arruda, P, Edwards, A.M, Elkins, J.M, Structural Genomics Consortium (SGC)
Deposit date:2017-11-28
Release date:2017-12-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Human CAMKK2B in complex with TAE-226
To Be Published
1AZ1
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BU of 1az1 by Molmil
ALRESTATIN BOUND TO C298A/W219Y MUTANT HUMAN ALDOSE REDUCTASE
Descriptor: ALDOSE REDUCTASE, ALRESTATIN, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Harrison, D.H.T, Bohren, K.M, Petsko, G.A, Ringe, D, Gabbay, K.H.
Deposit date:1997-11-24
Release date:1998-03-18
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The alrestatin double-decker: binding of two inhibitor molecules to human aldose reductase reveals a new specificity determinant.
Biochemistry, 36, 1997
5LVM
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BU of 5lvm by Molmil
Human PDK1 Kinase Domain in Complex with Adenine Bound to the ATP-Binding Site
Descriptor: 3-phosphoinositide-dependent protein kinase 1, ADENINE, DITHIANE DIOL
Authors:Schulze, J.O, Saladino, G, Busschots, K, Neimanis, S, Suess, E, Odadzic, D, Zeuzem, S, Hindie, V, Herbrand, A.K, Lisa, M.N, Alzari, P.M, Gervasio, F.L, Biondi, R.M.
Deposit date:2016-09-14
Release date:2016-10-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Bidirectional Allosteric Communication between the ATP-Binding Site and the Regulatory PIF Pocket in PDK1 Protein Kinase.
Cell Chem Biol, 23, 2016
6BQB
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BU of 6bqb by Molmil
MGG4 Fab in complex with peptide
Descriptor: GLYCEROL, MGG4 Fab heavy chain, MGG4 Fab light chain, ...
Authors:Oyen, D, Tan, J, Lanzavecchia, A, Wilson, I.A.
Deposit date:2017-11-27
Release date:2018-03-07
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (1.769 Å)
Cite:A public antibody lineage that potently inhibits malaria infection through dual binding to the circumsporozoite protein.
Nat. Med., 24, 2018
3NL6
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BU of 3nl6 by Molmil
The Crystal Structure of Candida glabrata THI6, a Bifunctional Enzyme involved in Thiamin Biosyhthesis of Eukaryotes
Descriptor: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, THIAMIN PHOSPHATE, ...
Authors:Paul, D, Chatterjee, A, Begley, T.P, Ealick, S.E.
Deposit date:2010-06-21
Release date:2010-11-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.612 Å)
Cite:Domain Organization in Candida glabrata THI6, a Bifunctional Enzyme Required for Thiamin Biosynthesis in Eukaryotes .
Biochemistry, 49, 2010
4NCO
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BU of 4nco by Molmil
Crystal Structure of the BG505 SOSIP gp140 HIV-1 Env trimer in Complex with the Broadly Neutralizing Fab PGT122
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP gp120, BG505 SOSIP gp41, ...
Authors:Julien, J.-P, Stanfield, R.L, Lyumkis, D, Ward, A.B, Wilson, I.A.
Deposit date:2013-10-24
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (4.7 Å)
Cite:Crystal structure of a soluble cleaved HIV-1 envelope trimer.
Science, 342, 2013
3ZUE
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BU of 3zue by Molmil
Rabbit Hemorrhagic Disease Virus (RHDV)capsid protein
Descriptor: CAPSID STRUCTURAL PROTEIN VP60
Authors:Luque, D, Gonzalez, J.M, Gomez-Blanco, J, Marabini, R, Chichon, J, Mena, I, Angulo, I, Carrascosa, J.L, Verdaguer, N, Trus, B.L, Barcena, J, Caston, J.R.
Deposit date:2011-07-18
Release date:2012-05-23
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (10.3 Å)
Cite:Epitope Insertion at the N-Terminal Molecular Switch of the Rabbit Hemorrhagic Disease Virus T=3 Capsid Protein Leads to Larger T=4 Capsids.
J.Virol., 86, 2012
1AOC
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BU of 1aoc by Molmil
JAPANESE HORSESHOE CRAB COAGULOGEN
Descriptor: COAGULOGEN, SULFATE ION
Authors:Bergner, A, Oganessyan, V, Muta, T, Iwanaga, S, Typke, D, Huber, R, Bode, W.
Deposit date:1996-11-28
Release date:1997-04-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a coagulogen, the clotting protein from horseshoe crab: a structural homologue of nerve growth factor.
EMBO J., 15, 1996
6BVT
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BU of 6bvt by Molmil
Importin alpha 1 in cargo free state
Descriptor: Importin subunit alpha-1
Authors:Smith, K.M, Tsimablyuk, S, Edwards, M.R, Aragao, D, Cross, E.M, Basler, C.F, Forwood, J.K.
Deposit date:2017-12-13
Release date:2018-07-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for importin alpha 3 specificity of W proteins in Hendra and Nipah viruses.
Nat Commun, 9, 2018
6C23
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BU of 6c23 by Molmil
Cryo-EM structure of PRC2 bound to cofactors AEBP2 and JARID2 in the Compact Active State
Descriptor: Histone-binding protein RBBP4, Histone-lysine N-methyltransferase EZH2, JARID2-substrate, ...
Authors:Kasinath, V, Faini, M, Poepsel, S, Reif, D, Feng, A, Stjepanovic, G, Aebersold, R, Nogales, E.
Deposit date:2018-01-05
Release date:2018-01-24
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structures of human PRC2 with its cofactors AEBP2 and JARID2.
Science, 359, 2018
5M3A
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BU of 5m3a by Molmil
Crystal structure of BRD4 BROMODOMAIN 1 IN COMPLEX WITH LIGAND 2
Descriptor: 1,2-ETHANEDIOL, 3-methyl-6-(1-methyl-5-phenoxy-pyrazol-4-yl)-[1,2,4]triazolo[4,3-b]pyridazine, Bromodomain-containing protein 4
Authors:Kessler, D, Mayer, M, Engelhardt, H, Wolkerstorfer, B, Geist, L.
Deposit date:2016-10-14
Release date:2017-09-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Direct NMR Probing of Hydration Shells of Protein Ligand Interfaces and Its Application to Drug Design.
J. Med. Chem., 60, 2017
3ZKF
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BU of 3zkf by Molmil
Structure of LC8 in complex with Nek9 phosphopeptide
Descriptor: DYNEIN LIGHT CHAIN 1, CYTOPLASMIC, NEK9 PROTEIN
Authors:Gallego, P, Velazquez-Campoy, A, Regue, L, Roig, J, Reverter, D.
Deposit date:2013-01-22
Release date:2013-03-20
Last modified:2013-05-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Analysis of the Regulation of the Dynll/Lc8 Binding to Nek9 by Phosphorylation
J.Biol.Chem., 288, 2013
5LRU
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BU of 5lru by Molmil
Structure of Cezanne/OTUD7B OTU domain
Descriptor: OTU domain-containing protein 7B
Authors:Mevissen, T.E.T, Kulathu, Y, Mulder, M.P.C, Geurink, P.P, Maslen, S.L, Gersch, M, Elliott, P.R, Burke, J.E, van Tol, B.D.M, Akutsu, M, El Oualid, F, Kawasaki, M, Freund, S.M.V, Ovaa, H, Komander, D.
Deposit date:2016-08-22
Release date:2016-10-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular basis of Lys11-polyubiquitin specificity in the deubiquitinase Cezanne.
Nature, 538, 2016
6BXZ
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BU of 6bxz by Molmil
Crystal Structure of Pig Protocadherin-15 EC10-MAD12
Descriptor: CALCIUM ION, Protocadherin related 15
Authors:De-la-Torre, P, Araya-Secchi, R, Choudhary, D, Sotomayor, M.
Deposit date:2017-12-19
Release date:2018-11-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:A Mechanically Weak Extracellular Membrane-Adjacent Domain Induces Dimerization of Protocadherin-15.
Biophys. J., 115, 2018
8T2B
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BU of 8t2b by Molmil
Crystal structure of SCV PTE G18C mutant RNA in complex with Fab BL3-6
Descriptor: BL3-6 Fab heavy chain, BL3-6 Fab light chain, RNA (90-MER)
Authors:Ojha, M, Koirala, D.
Deposit date:2023-06-05
Release date:2024-01-10
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Crystal structure of SCV PTE G18C mutant RNA in complex with Fab BL3-6
To Be Published
5M37
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BU of 5m37 by Molmil
The molecular tweezer CLR01 stabilizes a disordered protein-protein interface
Descriptor: (1R,5S,9S,16R,20R,24S,28S,35R)-3,22-Bis(dihydroxyphosphoryloxy)tridecacyclo[22.14.1.15,20.19,16.128,35.02,23.04,21.06,19.08,17.010,15.025,38.027,36.029,34]dotetraconta-2(23),3,6,8(17),10,12,14,18,21,25,27(36),29,31,33,37-pentadecaene, 14-3-3 protein zeta/delta, BENZOIC ACID, ...
Authors:Bier, D, Ottmann, C.
Deposit date:2016-10-14
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The Molecular Tweezer CLR01 Stabilizes a Disordered Protein-Protein Interface.
J. Am. Chem. Soc., 139, 2017
3ZKV
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BU of 3zkv by Molmil
Importin13 cytosolic state
Descriptor: CADMUS
Authors:Gruenwald, M, Lazzaretti, D, Bono, F.
Deposit date:2013-01-24
Release date:2013-04-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis for the Nuclear Export Activity of Importin13.
Embo J., 32, 2013
8T7E
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BU of 8t7e by Molmil
Cryo-EM structure of the Backtracking Initiation Complex (VII) of Human Mitochondrial DNA Polymerase Gamma
Descriptor: DNA polymerase subunit gamma-1, DNA polymerase subunit gamma-2, mitochondrial, ...
Authors:Nayak, A.R, Buchel, G, Herbine, K.H, Sarfallah, A, Sokolova, V.O, Zamudio-Ochoa, A, Temiakov, D.
Deposit date:2023-06-20
Release date:2024-01-10
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Structural basis for DNA proofreading.
Nat Commun, 14, 2023
3ZO5
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BU of 3zo5 by Molmil
Structure of SENP2-Loop1 in complex with preSUMO-2
Descriptor: SENTRIN-SPECIFIC PROTEASE 2, SMALL UBIQUITIN-RELATED MODIFIER 2
Authors:Alegre, K.O, Reverter, D.
Deposit date:2013-02-20
Release date:2014-01-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Insights Into the Senp6 Loop1 Structure in Complex with Sumo2.
Protein Sci., 23, 2014
8T2A
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BU of 8t2a by Molmil
Crystal structure of SCV PTE G18A mutant RNA in complex with Fab BL3-6
Descriptor: BL3-6 Fab heavy chain, BL3-6 Fab light chain, RNA (90-MER)
Authors:Ojha, M, Koirala, D.
Deposit date:2023-06-05
Release date:2024-01-10
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Crystal structure of SCV PTE G18A mutant RNA in complex with Fab BL3-6
To Be Published
8T2O
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BU of 8t2o by Molmil
Crystal structure of SCV PTE G18U RNA in complex with Fab BL3-6
Descriptor: BL3-6 Fab heavy chain, BL3-6 Fab light chain, RNA (90-MER)
Authors:Ojha, M, Koirala, D.
Deposit date:2023-06-06
Release date:2024-01-10
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Crystal structure of SCV PTE G18U RNA in complex with Fab BL3-6
To Be Published
8SMW
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BU of 8smw by Molmil
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5c chemically conjugated to histone H2A. No density for Ub.) (class 1)
Descriptor: DNA (147-MER), E3 ubiquitin-protein ligase RNF168, Histone H2A type 1-B/E, ...
Authors:Hu, Q, Botuyan, M.V, Zhao, D, Cui, G, Mer, G.
Deposit date:2023-04-26
Release date:2024-01-17
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Mechanisms of RNF168 nucleosome recognition and ubiquitylation.
Mol.Cell, 84, 2024

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PDB entries from 2024-07-17

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