Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 22600 results

5GKM
DownloadVisualize
BU of 5gkm by Molmil
Crystal structure of the N-terminal Domain of Caseinolytic protease associated chaperone ClpD from Arabidopsis thaliana
Descriptor: AT5g51070/K3K7_27
Authors:Mohapatra, C, Vasudevan, D.
Deposit date:2016-07-04
Release date:2017-03-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures reveal N-terminal Domain of Arabidopsis thaliana ClpD to be highly divergent from that of ClpC1.
Sci Rep, 7, 2017
1TH1
DownloadVisualize
BU of 1th1 by Molmil
Beta-catenin in complex with a phosphorylated APC 20aa repeat fragment
Descriptor: Adenomatous polyposis coli protein, Beta-catenin
Authors:Xing, Y, Clements, W.K, Le Trong, I, Hinds, T.R, Stenkamp, R, Kimelman, D, Xu, W.
Deposit date:2004-05-31
Release date:2004-09-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of a beta-Catenin/APC Complex Reveals a Critical Role for APC Phosphorylation in APC Function.
Mol.Cell, 15, 2004
5HJB
DownloadVisualize
BU of 5hjb by Molmil
AF9 YEATS in complex with histone H3 Crotonylation at K9
Descriptor: Protein AF-9, peptide of Histone H3.1
Authors:Li, Y.Y, Zhao, D, Guan, H.P, Li, H.T.
Deposit date:2016-01-12
Release date:2016-04-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular Coupling of Histone Crotonylation and Active Transcription by AF9 YEATS Domain
Mol.Cell, 62, 2016
5HJD
DownloadVisualize
BU of 5hjd by Molmil
AF9 YEATS in complex with histone H3 Crotonylation at K18
Descriptor: COPPER (II) ION, Protein AF-9, SULFATE ION, ...
Authors:Li, Y.Y, Zhao, D, Guan, H.P, Li, H.T.
Deposit date:2016-01-13
Release date:2016-04-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.806 Å)
Cite:Molecular Coupling of Histone Crotonylation and Active Transcription by AF9 YEATS Domain.
Mol.Cell, 62, 2016
1A5Y
DownloadVisualize
BU of 1a5y by Molmil
PROTEIN TYROSINE PHOSPHATASE 1B CYSTEINYL-PHOSPHATE INTERMEDIATE
Descriptor: PROTEIN TYROSINE PHOSPHATASE 1B
Authors:Pannifer, A.D.P, Flint, A.J, Tonks, N.K, Barford, D.
Deposit date:1998-02-19
Release date:1998-06-17
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Visualization of the cysteinyl-phosphate intermediate of a protein-tyrosine phosphatase by x-ray crystallography.
J.Biol.Chem., 273, 1998
1AK0
DownloadVisualize
BU of 1ak0 by Molmil
P1 NUCLEASE IN COMPLEX WITH A SUBSTRATE ANALOG
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-(DITHIO)PHOSPHATE, ...
Authors:Romier, C, Suck, D.
Deposit date:1997-05-28
Release date:1997-12-03
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Recognition of single-stranded DNA by nuclease P1: high resolution crystal structures of complexes with substrate analogs.
Proteins, 32, 1998
1T4T
DownloadVisualize
BU of 1t4t by Molmil
arginase-dinor-NOHA complex
Descriptor: 3-{[(E)-AMINO(HYDROXYIMINO)METHYL]AMINO}ALANINE, Arginase 1, MANGANESE (II) ION
Authors:Cama, E, Pethe, S, Boucher, J.-L, Shoufa, H, Emig, F.A, Ash, D.E, Viola, R.E, Mansuy, D, Christianson, D.W.
Deposit date:2004-04-30
Release date:2005-04-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Inhibitor coordination interactions in the binuclear manganese cluster of arginase
Biochemistry, 43, 2004
1T5H
DownloadVisualize
BU of 1t5h by Molmil
4-Chlorobenzoyl-CoA Ligase/Synthetase unliganded, selenomethionine
Descriptor: 4-chlorobenzoyl CoA ligase, CALCIUM ION
Authors:Gulick, A.M, Lu, X, Dunaway-Mariano, D.
Deposit date:2004-05-04
Release date:2004-08-03
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Crystal Structure of 4-Chlorobenzoate:CoA Ligase/Synthetase in the Unliganded and Aryl Substrate-Bound States
Biochemistry, 43, 2004
5BPW
DownloadVisualize
BU of 5bpw by Molmil
Atomic-resolution structures of the APC/C subunits Apc4 and the Apc5 N-terminal domain
Descriptor: Anaphase-promoting complex subunit 4
Authors:Kulkarni, K, Yang, J, Zhang, Z, Barford, D.
Deposit date:2015-05-28
Release date:2015-09-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Atomic-Resolution Structures of the APC/C Subunits Apc4 and the Apc5 N-Terminal Domain.
J.Mol.Biol., 427, 2015
5H8X
DownloadVisualize
BU of 5h8x by Molmil
Crystal structure of the complex MMP-8/BF471 (catechol inhibitor)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, Neutrophil collagenase, ...
Authors:Pochetti, G, Montanari, R, Capelli, D, Tortorella, P.
Deposit date:2015-12-24
Release date:2016-11-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Catechol-based matrix metalloproteinase inhibitors with additional antioxidative activity.
J Enzyme Inhib Med Chem, 31, 2016
5HON
DownloadVisualize
BU of 5hon by Molmil
Structure of Domain 4 of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinotriose
Descriptor: CALCIUM ION, Extracellular arabinanase, alpha-L-arabinofuranose-(1-5)-alpha-L-arabinofuranose-(1-5)-alpha-L-arabinofuranose
Authors:Lansky, S, Azoulai, D, Shwartstien, O, Shoham, Y, Shoham, G.
Deposit date:2016-01-19
Release date:2017-02-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structure of Domain 4 of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinotriose
To Be Published
1TH4
DownloadVisualize
BU of 1th4 by Molmil
crystal structure of NADPH depleted bovine liver catalase complexed with 3-amino-1,2,4-triazole
Descriptor: 3-AMINO-1,2,4-TRIAZOLE, Catalase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sugadev, R, Ponnuswamy, M.N, Kumaran, D, Swaminathan, S, Sekar, K.
Deposit date:2004-06-01
Release date:2005-07-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:crystal structure of bovine liver catalase
TO BE PUBLISHED
1T6F
DownloadVisualize
BU of 1t6f by Molmil
Crystal Structure of the Coiled-coil Dimerization Motif of Geminin
Descriptor: Geminin
Authors:Thepaut, M, Maiorano, D, Guichou, J.-F, Auge, M.-T, Dumas, C, Mechali, M, Padilla, A.
Deposit date:2004-05-06
Release date:2004-07-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Crystal Structure of the Coiled-coil Dimerization Motif of Geminin: Structural and Functional Insights on DNA Replication Regulation
J.Mol.Biol., 342, 2004
3PUT
DownloadVisualize
BU of 3put by Molmil
Crystal Structure of the CERT START domain (mutant V151E) from Rhizobium etli at the resolution 1.8A, Northeast Structural Genomics Consortium Target ReR239.
Descriptor: HEXANE-1,6-DIOL, Hypothetical conserved protein
Authors:Kuzin, A, Chen, Y, Seetharaman, J, Mao, M, Xiao, R, Ciccosanti, C, Wang, D, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-12-06
Release date:2010-12-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.828 Å)
Cite:Crystal Structure of the CERT START domain (mutant V151E) from Rhizobium etli at the resolution 1.8A, Northeast Structural Genomics Consortium Target ReR239.
To be Published
5HOB
DownloadVisualize
BU of 5hob by Molmil
p73 homo-tetramerization domain mutant I
Descriptor: MAGNESIUM ION, Tumor protein p73
Authors:Coutandin, D, Krojer, T, Salah, E, Mathea, S, Knapp, S, Dotsch, V.
Deposit date:2016-01-19
Release date:2016-10-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.220013 Å)
Cite:Structural basis of p63/p73 hetero-tetramerization
To Be Published
1TKJ
DownloadVisualize
BU of 1tkj by Molmil
Streptomyces griseus aminopeptidase complexed with D-Methionine
Descriptor: Aminopeptidase, CALCIUM ION, D-METHIONINE, ...
Authors:Reiland, V, Gilboa, R, Spungin-Bialik, A, Schomburg, D, Shoham, Y, Blumberg, S, Shoham, G.
Deposit date:2004-06-08
Release date:2005-06-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Interactions of D Amino Acids with Streptomyces griseus Aminopeptidase
To be Published
1TKY
DownloadVisualize
BU of 1tky by Molmil
Crystal structure of the editing domain of threonyl-tRNA synthetase complexed with seryl-3'-aminoadenosine
Descriptor: SERINE-3'-AMINOADENOSINE, Threonyl-tRNA synthetase
Authors:Dock-Bregeon, A.C, Rees, B, Torres-Larios, A, Bey, G, Caillet, J, Moras, D.
Deposit date:2004-06-09
Release date:2004-11-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Achieving Error-Free Translation; The Mechanism of Proofreading of Threonyl-tRNA Synthetase at Atomic Resolution.
Mol.Cell, 16, 2004
5HUC
DownloadVisualize
BU of 5huc by Molmil
DAHP synthase from Corynebacterium glutamicum
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3-Deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, MANGANESE (II) ION, ...
Authors:Burschowsky, D, Heim, J.B, Thorbjoernsrud, H.V, Krengel, U.
Deposit date:2016-01-27
Release date:2017-08-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Inter-Enzyme Allosteric Regulation of Chorismate Mutase in Corynebacterium glutamicum: Structural Basis of Feedback Activation by Trp.
Biochemistry, 57, 2018
1SRZ
DownloadVisualize
BU of 1srz by Molmil
Solution structure of the second complement control protein (CCP) module of the GABA(B)R1a receptor, Pro-119 trans conformer
Descriptor: Gamma-aminobutyric acid type B receptor, subunit 1
Authors:Blein, S, Uhrin, D, Smith, B.O, White, J.H, Barlow, P.N.
Deposit date:2004-03-23
Release date:2004-10-12
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Structural Analysis of the Complement Control Protein (CCP) Modules of GABAB Receptor 1a: ONLY ONE OF THE TWO CCP MODULES IS COMPACTLY FOLDED
J.Biol.Chem., 279, 2004
5BUY
DownloadVisualize
BU of 5buy by Molmil
Crystal Structure of beta-hydroxyacyl-acyl carrier protein dehydratase (FabZ) from Francisella tularensis
Descriptor: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ, SULFATE ION
Authors:McGillick, B, Kumaran, D, Swaminathan, S.
Deposit date:2015-06-04
Release date:2016-06-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal Structure of beta-hydroxyacyl-acyl carrier protein dehydratase (FabZ) from Francisella tularensis
To be published
1TBX
DownloadVisualize
BU of 1tbx by Molmil
Crystal structure of SSV1 F-93
Descriptor: Hypothetical 11.0 kDa protein
Authors:Kraft, P, Oeckinghaus, A, Kummel, D, Gauss, G.H, Wiedenheft, B, Young, M, Lawrence, C.M.
Deposit date:2004-05-20
Release date:2004-07-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of F-93 from Sulfolobus spindle-shaped virus 1, a winged-helix DNA binding protein.
J.Virol., 78, 2004
5HV8
DownloadVisualize
BU of 5hv8 by Molmil
Solution structure of an octanoyl- loaded acyl carrier protein domain from module MLSA2 of the mycolactone polyketide synthase.
Descriptor: S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] octanethioate, Type I modular polyketide synthase
Authors:Vance, S, Tkachenko, O, Thomas, B, Bassuni, M, Hong, H, Nietlispach, D, Broadhurst, R.W.
Deposit date:2016-01-28
Release date:2016-03-09
Last modified:2019-10-23
Method:SOLUTION NMR
Cite:Sticky swinging arm dynamics: studies of an acyl carrier protein domain from the mycolactone polyketide synthase.
Biochem.J., 473, 2016
1SSZ
DownloadVisualize
BU of 1ssz by Molmil
Conformational Mapping of Mini-B: An N-terminal/C-terminal Construct of Surfactant Protein B Using 13C-Enhanced Fourier Transform Infrared (FTIR) Spectroscopy
Descriptor: Pulmonary surfactant-associated protein B
Authors:Waring, A.J, Walther, F.J, Gordon, L.M, Hernandez-Juviel, J.M, Hong, T, Sherman, M.A, Alonso, C, Alig, T, Braun, A, Bacon, D, Zasadzinski, J.A.
Deposit date:2004-03-24
Release date:2004-06-15
Last modified:2019-04-24
Method:INFRARED SPECTROSCOPY
Cite:The role of charged amphipathic helices in the structure and function of surfactant protein B.
J.Pept.Res., 66, 2005
1T9G
DownloadVisualize
BU of 1t9g by Molmil
Structure of the human MCAD:ETF complex
Descriptor: ADENOSINE MONOPHOSPHATE, Acyl-CoA dehydrogenase, medium-chain specific, ...
Authors:Toogood, H.S, van Thiel, A, Basran, J, Sutcliffe, M.J, Scrutton, N.S, Leys, D.
Deposit date:2004-05-17
Release date:2004-06-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Extensive domain motion and electron transfer in the human electron transferring flavoprotein-medium chain Acyl-CoA dehydrogenase complex
J.Biol.Chem., 279, 2004
5HZH
DownloadVisualize
BU of 5hzh by Molmil
Crystal structure of photoinhibitable Rac1 containing C450A mutant LOV2 domain
Descriptor: CALCIUM ION, FLAVIN MONONUCLEOTIDE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Tarnawski, M, Dagliyan, O, Chu, P.H, Shirvanyants, D, Dokholyan, N.V, Hahn, K.M, Schlichting, I.
Deposit date:2016-02-02
Release date:2016-12-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Engineering extrinsic disorder to control protein activity in living cells.
Science, 354, 2016

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon