Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 24246 results

2WSO
DownloadVisualize
BU of 2wso by Molmil
Structure of Cerulean Fluorescent Protein at physiological pH
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Lelimousin, M, Noirclerc-Savoye, M, Lazareno-Saez, C, Paetzold, B, Le Vot, S, Chazal, R, Macheboeuf, P, Field, M.J, Bourgeois, D, Royant, A.
Deposit date:2009-09-08
Release date:2009-09-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Intrinsic Dynamics in Ecfp and Cerulean Control Fluorescence Quantum Yield.
Biochemistry, 48, 2009
2X06
DownloadVisualize
BU of 2x06 by Molmil
SULFOLACTATE DEHYDROGENASE FROM METHANOCALDOCOCCUS JANNASCHII
Descriptor: L-SULFOLACTATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Irimia, A, Madern, D, Zaccai, G, Vellieux, F.M.D.
Deposit date:2009-12-07
Release date:2009-12-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Methanoarchaeal Sulfolactate Dehydrogenase: Prototype of a New Family of Nadh-Dependent Enzymes.
Embo J., 23, 2004
2X8Y
DownloadVisualize
BU of 2x8y by Molmil
Crystal structure of AnCE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANGIOTENSIN CONVERTING ENZYME, CITRATE ANION, ...
Authors:Akif, M, Georgiadis, D, Mahajan, A, Dive, V, Sturrock, E.D, Isaac, R.E, Acharya, K.R.
Deposit date:2010-03-14
Release date:2010-06-02
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:High Resolution Crystal Structures of Drosophila Melanogaster Angiotensin Converting Enzyme in Complex with Novel Inhibitors and Anti- Hypertensive Drugs.
J.Mol.Biol., 400, 2010
2X97
DownloadVisualize
BU of 2x97 by Molmil
Crystal structure of AnCE-RXP407 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANGIOTENSIN CONVERTING ENZYME, N~2~-acetyl-N-{(1R)-1-[(S)-[(2S)-3-{[(2S)-1-amino-1-oxopropan-2-yl]amino}-2-methyl-3-oxopropyl](hydroxy)phosphoryl]-2-phenylethyl}-L-alpha-asparagine, ...
Authors:Akif, M, Georgiadis, D, Mahajan, A, Dive, V, Sturrock, E.D, Isaac, R.E, Acharya, K.R.
Deposit date:2010-03-14
Release date:2010-06-02
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:High Resolution Crystal Structures of Drosophila Melanogaster Angiotensin Converting Enzyme in Complex with Novel Inhibitors and Anti- Hypertensive Drugs.
J.Mol.Biol., 400, 2010
2WTG
DownloadVisualize
BU of 2wtg by Molmil
High resolution 3D structure of C.elegans globin-like protein GLB-1
Descriptor: GLOBIN-LIKE PROTEIN, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Geuens, E, Hoogewijs, D, Nardini, M, Vinck, E, Pesce, A, Kiger, L, Fago, A, Tilleman, L, De Henau, S, Marden, M, Weber, R.E, Van Doorslaer, S, Vanfleteren, J, Moens, L, Bolognesi, M, Dewilde, S.
Deposit date:2009-09-16
Release date:2010-04-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Globin-Like Proteins in Caenorhabditis Elegans: In Vivo Localization, Ligand Binding and Structural Properties.
Bmc Biochem., 11, 2010
3NVE
DownloadVisualize
BU of 3nve by Molmil
MMHFGN segment 138-143 from Syrian Hamster prion
Descriptor: Major prion protein
Authors:Apostol, M.I, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-07-08
Release date:2011-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Atomic structures suggest determinants of transmission barriers in Mammalian prion disease.
Biochemistry, 50, 2011
5JFS
DownloadVisualize
BU of 5jfs by Molmil
Crystal structure of TrkA in complex with PF-00593174
Descriptor: High affinity nerve growth factor receptor, N-{4-[4-amino-7-(propan-2-yl)-7H-pyrrolo[2,3-d]pyrimidine-5-carbonyl]pyridin-2-yl}-N'-(2,4-difluorophenyl)urea
Authors:Jayasankar, J, Brown, D, Skerratt, S, Kurumbail, R.
Deposit date:2016-04-19
Release date:2017-03-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:The Discovery of a Potent, Selective, and Peripherally Restricted Pan-Trk Inhibitor (PF-06273340) for the Treatment of Pain.
J. Med. Chem., 59, 2016
2X31
DownloadVisualize
BU of 2x31 by Molmil
Modelling of the complex between subunits BchI and BchD of magnesium chelatase based on single-particle cryo-EM reconstruction at 7.5 ang
Descriptor: MAGNESIUM-CHELATASE 38 KDA SUBUNIT, MAGNESIUM-CHELATASE 60 KDA SUBUNIT
Authors:Lunqvist, J, Elmlund, H, Peterson Wulff, R, Berglund, L, Elmlund, D, Emanuelsson, C, Hebert, H, Willows, R.D, Hansson, M, Lindahl, M, Al-Karadaghi, S.
Deposit date:2010-01-19
Release date:2010-11-10
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:ATP-Induced Conformational Dynamics in the Aaa+ Motor Unit of Magnesium Chelatase.
Structure, 18, 2010
5JFV
DownloadVisualize
BU of 5jfv by Molmil
Crystal structure of TrkA in complex with PF-05206283
Descriptor: High affinity nerve growth factor receptor, N-{5-[4-amino-7-(propan-2-yl)-7H-pyrrolo[2,3-d]pyrimidine-5-carbonyl]pyridin-3-yl}-2-(4-chlorophenyl)acetamide
Authors:Jayasankar, J, Kurumbail, R, Brown, D, Skerratt, S.
Deposit date:2016-04-19
Release date:2017-03-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:The Discovery of a Potent, Selective, and Peripherally Restricted Pan-Trk Inhibitor (PF-06273340) for the Treatment of Pain.
J. Med. Chem., 59, 2016
3NVF
DownloadVisualize
BU of 3nvf by Molmil
IIHFGS segment 138-143 from human prion
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Major prion protein
Authors:Apostol, M.I, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-07-08
Release date:2011-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Atomic structures suggest determinants of transmission barriers in Mammalian prion disease.
Biochemistry, 50, 2011
2WUX
DownloadVisualize
BU of 2wux by Molmil
the crystal structure of recombinant baculovirus polyhedra
Descriptor: POLYHEDRIN
Authors:Ji, X, Sutton, G, Evans, G, Axford, D, Owen, R, Stuart, D.I.
Deposit date:2009-10-10
Release date:2009-12-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.838 Å)
Cite:How Baculovirus Polyhedra Fit Square Pegs Into Round Holes to Robustly Package Viruses.
Embo J., 29, 2010
5JMD
DownloadVisualize
BU of 5jmd by Molmil
Heparinase III-BT4657 gene product, Methylated Lysines
Descriptor: Heparinase III protein, MAGNESIUM ION
Authors:Ulaganathan, T.S, Shi, R, Yao, D, Garron, M.-L, Cherney, M, Cygler, M.
Deposit date:2016-04-28
Release date:2016-05-25
Last modified:2025-04-02
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Conformational flexibility of PL12 family heparinases: structure and substrate specificity of heparinase III from Bacteroides thetaiotaomicron (BT4657).
Glycobiology, 27, 2017
3NVG
DownloadVisualize
BU of 3nvg by Molmil
MIHFGN segment 137-142 from mouse prion
Descriptor: Major prion protein
Authors:Apostol, M.I, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-07-08
Release date:2011-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Atomic structures suggest determinants of transmission barriers in Mammalian prion disease.
Biochemistry, 50, 2011
3NW9
DownloadVisualize
BU of 3nw9 by Molmil
Rat COMT in complex with a methylpurin-containing bisubstrate inhibitor
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CHLORIDE ION, Catechol O-methyltransferase, ...
Authors:Ehler, A, Schlatter, D, Stihle, M, Benz, J, Rudolph, M.G.
Deposit date:2010-07-09
Release date:2011-03-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Molecular Recognition at the Active Site of Catechol-O-methyltransferase (COMT): Adenine Replacements in Bisubstrate Inhibitors
Chemistry, 17, 2011
2WMN
DownloadVisualize
BU of 2wmn by Molmil
Structure of the complex between DOCK9 and Cdc42-GDP.
Descriptor: CELL DIVISION CONTROL PROTEIN 42 HOMOLOG, DEDICATOR OF CYTOKINESIS PROTEIN 9, GUANOSINE-5'-DIPHOSPHATE
Authors:Yang, J, Roe, S.M, Barford, D.
Deposit date:2009-07-02
Release date:2009-09-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.391 Å)
Cite:Activation of Rho Gtpases by Dock Exchange Factors is Mediated by a Nucleotide Sensor.
Science, 325, 2009
2X79
DownloadVisualize
BU of 2x79 by Molmil
Inward facing conformation of Mhp1
Descriptor: Hydantoin permease
Authors:Shimamura, T, Weyand, S, Beckstein, O, Rutherford, N.G, Hadden, J.M, Sharples, D, Sansom, M.S.P, Iwata, S, Henderson, P.J.F, Cameron, A.D.
Deposit date:2010-02-25
Release date:2010-05-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Molecular Basis of Alternating Access Membrane Transport by the Sodium-Hydantoin Transporter Mhp1.
Science, 328, 2010
5JK3
DownloadVisualize
BU of 5jk3 by Molmil
Crystal structure of TL11-128 bound to TAK1-TAB1
Descriptor: Mitogen-activated protein kinase kinase kinase 7,TGF-beta-activated kinase 1 and MAP3K7-binding protein 1, ~{N}-[2-[5-chloranyl-2-[(1-methylpyrazol-4-yl)amino]pyrimidin-4-yl]oxyphenyl]prop-2-enamide
Authors:Gurbani, D, Westover, K.D.
Deposit date:2016-04-25
Release date:2017-02-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.371 Å)
Cite:Structure-guided development of covalent TAK1 inhibitors.
Bioorg. Med. Chem., 25, 2017
5J01
DownloadVisualize
BU of 5j01 by Molmil
Structure of the lariat form of a chimeric derivative of the Oceanobacillus iheyensis group II intron in the presence of NH4+ and MG2+.
Descriptor: AMMONIUM ION, MAGNESIUM ION, group II intron lariat
Authors:Costa, M, Walbott, H, Monachello, D, Westhof, E, Michel, F.
Deposit date:2016-03-26
Release date:2016-12-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.39 Å)
Cite:Crystal structures of a group II intron lariat primed for reverse splicing.
Science, 354, 2016
5XJ6
DownloadVisualize
BU of 5xj6 by Molmil
Crystal structure of PlsY (YgiH), an integral membrane glycerol 3-phosphate acyltransferase - the glycerol 3-phosphate form
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Glycerol-3-phosphate acyltransferase, PHOSPHATE ION, ...
Authors:Li, Z, Tang, Y, Li, D.
Deposit date:2017-04-30
Release date:2017-12-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Structural insights into the committed step of bacterial phospholipid biosynthesis.
Nat Commun, 8, 2017
2X52
DownloadVisualize
BU of 2x52 by Molmil
CRYSTAL STRUCTURE OF WHEAT GERM AGGLUTININ ISOLECTIN 3 IN COMPLEX WITH A SYNTHETIC DIVALENT CARBOHYDRATE LIGAND
Descriptor: AGGLUTININ ISOLECTIN 3, BIS-(2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSYLOXYCARBONYL)-4,7,10-TRIOXA-1,13-TRIDECANEDIAMINE, GLYCEROL
Authors:Schwefel, D, Maierhofer, C, Wittmann, V, Diederichs, K, Welte, W.
Deposit date:2010-02-05
Release date:2010-02-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Basis of Multivalent Binding to Wheat Germ Agglutinin.
J.Am.Chem.Soc., 132, 2010
5J26
DownloadVisualize
BU of 5j26 by Molmil
Crystal structure of a 53BP1 Tudor domain in complex with a ubiquitin variant
Descriptor: Tumor suppressor p53-binding protein 1, Ubiquitin Variant i53
Authors:Wan, L, Canny, M, Juang, Y.C, Durocher, D, Sicheri, F.
Deposit date:2016-03-29
Release date:2016-12-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.5047 Å)
Cite:A genetically encoded inhibitor of 53BP1 to stimulate homology-based gene editing
To Be Published
2X92
DownloadVisualize
BU of 2x92 by Molmil
Crystal structure of AnCE-ramiprilat complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ANGIOTENSIN CONVERTING ENZYME, ...
Authors:Akif, M, Georgiadis, D, Mahajan, A, Dive, V, Sturrock, E.D, Isaac, R.E, Acharya, K.R.
Deposit date:2010-03-14
Release date:2010-06-02
Last modified:2025-03-12
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:High Resolution Crystal Structures of Drosophila Melanogaster Angiotensin Converting Enzyme in Complex with Novel Inhibitors and Anti- Hypertensive Drugs.
J.Mol.Biol., 400, 2010
5J2L
DownloadVisualize
BU of 5j2l by Molmil
De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity
Descriptor: protein design 2L4HC2_11
Authors:Sankaran, B, Zwart, P.H, Pereira, J.H, Baker, D, Boyken, S, Chen, Z, Groves, B, Langan, R.A, Oberdorfer, G, Ford, A, Gilmore, J, Xu, C, DiMaio, F, Seelig, G.
Deposit date:2016-03-29
Release date:2016-05-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity.
Science, 352, 2016
7P48
DownloadVisualize
BU of 7p48 by Molmil
Staphylococcus aureus ribosome in complex with Sal(B)
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Nicholson, D, Ranson, N.A, O'Neill, A.J.
Deposit date:2021-07-09
Release date:2022-02-02
Last modified:2022-03-09
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Sal-type ABC-F proteins: intrinsic and common mediators of pleuromutilin resistance by target protection in staphylococci.
Nucleic Acids Res., 50, 2022
1QI1
DownloadVisualize
BU of 1qi1 by Molmil
Ternary Complex of an NADP Dependent Aldehyde Dehydrogenase
Descriptor: GLYCERALDEHYDE-3-PHOSPHATE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTEIN (NADP-DEPENDENT NONPHOSPHORYLATING GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE), ...
Authors:Cobessi, D, Tete-Favier, F, Marchal, S, Branlant, G, Aubry, A.
Deposit date:1999-06-02
Release date:2001-01-10
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and biochemical investigations of the catalytic mechanism of an NADP-dependent aldehyde dehydrogenase from Streptococcus mutans.
J.Mol.Biol., 300, 2000

236620

PDB entries from 2025-05-28

PDB statisticsPDBj update infoContact PDBjnumon