Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 53878 results

6ZIO
DownloadVisualize
BU of 6zio by Molmil
CRYSTAL STRUCTURE OF NRAS (C118S) IN COMPLEX WITH GDP
Descriptor: GTPase NRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Kessler, D, Fischer, G, Boettcher, J.
Deposit date:2020-06-26
Release date:2020-08-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Drugging all RAS isoforms with one pocket.
Future Med Chem, 12, 2020
5IX9
DownloadVisualize
BU of 5ix9 by Molmil
Cell surface anchoring domain
Descriptor: Antifreeze protein
Authors:Guo, S, Langelaan, D.
Deposit date:2016-03-23
Release date:2017-06-28
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of a 1.5-MDa adhesin that binds its Antarctic bacterium to diatoms and ice.
Sci Adv, 3, 2017
5IXK
DownloadVisualize
BU of 5ixk by Molmil
RORgamma in complex with inverse agonist BIO399.
Descriptor: N-(5-ethyl-3,3-dimethyl-4-oxo-2,3,4,5-tetrahydro-1,5-benzoxazepin-8-yl)-3,4-dimethyl-N-(2,2,2-trifluoroethyl)benzene-1-sulfonamide, Nuclear receptor ROR-gamma
Authors:Marcotte, D.J.
Deposit date:2016-03-23
Release date:2016-06-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural determinant for inducing RORgamma specific inverse agonism triggered by a synthetic benzoxazinone ligand.
Bmc Struct.Biol., 16, 2016
5IVU
DownloadVisualize
BU of 5ivu by Molmil
Crystal Structure of Streptomyces griseoflavus Cofilin
Descriptor: Cofilin
Authors:Schwebach, C, Sotomayor, M, Kudryashov, D.S.
Deposit date:2016-03-21
Release date:2017-03-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Crystal Structure of Streptomyces griseoflavus Cofilin
To Be Published
4Z4Q
DownloadVisualize
BU of 4z4q by Molmil
Quinazolinedione(PD 0305970)-DNA cleavage complex of topoisomerase IV from S. pneumoniae
Descriptor: 3-amino-7-{(3R)-3-[(1S)-1-aminoethyl]pyrrolidin-1-yl}-1-cyclopropyl-6-fluoro-8-methylquinazoline-2,4(1H,3H)-dione, DNA topoisomerase 4 subunit B,DNA topoisomerase 4 subunit A, MAGNESIUM ION, ...
Authors:Laponogov, I, Veselkov, D.A, Pan, X.-S, Selvarajah, J, Crevel, I.M.-T, Fisher, L.M, Sanderson, M.R.
Deposit date:2015-04-02
Release date:2016-09-14
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:Structural studies of the drug-stabilized cleavage complexes of topoisomerase IV and gyrase from Streptococcus pneumoniae
To Be Published
8OYL
DownloadVisualize
BU of 8oyl by Molmil
Coiled-Coil Domain of Human STIL, Q729L Mutant
Descriptor: CADMIUM ION, CHLORIDE ION, SCL-interrupting locus protein, ...
Authors:Martin, F.J.O, Shamir, M, Woolfson, D.N, Friedler, A.
Deposit date:2023-05-05
Release date:2023-10-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Molecular Mechanism of STIL Coiled-Coil Domain Oligomerization.
Int J Mol Sci, 24, 2023
6IX1
DownloadVisualize
BU of 6ix1 by Molmil
Structure of 2S albumin seed protein from Dolichos
Descriptor: 2S Albumin protein, SULFATE ION
Authors:Sharma, S.C, Kumar, A, Salunke, D.M.
Deposit date:2018-12-08
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:High resolution structural and functional analysis of a hemopexin motif protein from Dolichos.
Sci Rep, 9, 2019
4RXZ
DownloadVisualize
BU of 4rxz by Molmil
Crystal Structure of MDMX phosporylated Tyr99 in complex with a 12-mer peptide
Descriptor: 12-MER PEPTIDE INHIBITOR, Protein Mdm4
Authors:Pazgier, M, Gohain, N, Tolbert, W.D.
Deposit date:2014-12-12
Release date:2015-07-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis of how stress-induced MDMX phosphorylation activates p53.
Oncogene, 35, 2016
1Z60
DownloadVisualize
BU of 1z60 by Molmil
Solution structure of the carboxy-terminal domain of human TFIIH P44 subunit
Descriptor: TFIIH basal transcription factor complex p44 subunit, ZINC ION
Authors:Kellenberger, E, Dominguez, C, Fribourg, S, Wasielewski, E, Moras, D, Poterszman, A, Boelens, R, Kieffer, B.
Deposit date:2005-03-21
Release date:2005-04-12
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the C-terminal domain of TFIIH P44 subunit reveals a novel type of C4C4 ring domain involved in protein-protein interactions.
J.Biol.Chem., 280, 2005
8OTX
DownloadVisualize
BU of 8otx by Molmil
Cryo-EM structure of Strongylocentrotus purpuratus sperm-specific Na+/H+ exchanger SLC9C1 in nanodisc
Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, Sperm-specific sodium proton exchanger
Authors:Yeo, H, Mehta, V, Gulati, A, Drew, D.
Deposit date:2023-04-21
Release date:2023-11-01
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Structure and electromechanical coupling of a voltage-gated Na + /H + exchanger.
Nature, 623, 2023
4YOB
DownloadVisualize
BU of 4yob by Molmil
Crystal Structure of Apo HIV-1 Protease MDR769 L33F
Descriptor: HIV-1 Protease
Authors:Kuiper, B.D, Keusch, B, Dewdney, T.G, Chordia, P, Ross, K, Brunzelle, J.S, Kovari, I.A, MacArthur, R, Salimnia, H, Kovari, L.C.
Deposit date:2015-03-11
Release date:2015-07-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.504 Å)
Cite:The L33F darunavir resistance mutation acts as a molecular anchor reducing the flexibility of the HIV-1 protease 30s and 80s loops.
Biochem Biophys Rep, 2, 2015
8OTQ
DownloadVisualize
BU of 8otq by Molmil
Cryo-EM structure of Strongylocentrotus purpuratus sperm-specific Na+/H+ exchanger SLC9C1 in GDN
Descriptor: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, PALMITIC ACID, Sperm-specific sodium proton exchanger
Authors:Yeo, H, Mehta, V, Gulati, A, Drew, D.
Deposit date:2023-04-21
Release date:2023-11-01
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Structure and electromechanical coupling of a voltage-gated Na + /H + exchanger.
Nature, 623, 2023
6VRU
DownloadVisualize
BU of 6vru by Molmil
PIM-inhibitor complex 1
Descriptor: 3,4-dichloro-2-cyclopropyl-1-[(piperidin-4-yl)methyl]-1H-pyrrolo[2,3-b]pyridine-6-carboxamide, ACETATE ION, IMIDAZOLE, ...
Authors:Barberis, C.E, Batchelor, J.D, Mechin, I, Liu, J.
Deposit date:2020-02-10
Release date:2020-11-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Discovery of SARxxxx92, a pan-PIM kinase inhibitor, efficacious in a KG1 tumor model.
Bioorg.Med.Chem.Lett., 30, 2020
8EEU
DownloadVisualize
BU of 8eeu by Molmil
Venezuelan equine encephalitis virus-like particle in complex with Fab SKT05
Descriptor: Coat protein, Fab SKT05 heavy chain, Fab SKT05 light chain
Authors:Tsybovsky, Y, Pletnev, S, Verardi, R, Roederer, M, Kwong, P.D.
Deposit date:2022-09-07
Release date:2023-07-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
2CRT
DownloadVisualize
BU of 2crt by Molmil
CARDIOTOXIN III FROM TAIWAN COBRA (NAJA NAJA ATRA) DETERMINATION OF STRUCTURE IN SOLUTION AND COMPARISON WITH SHORT NEUROTOXINS
Descriptor: CARDIOTOXIN III
Authors:Bhaskaran, R, Huang, C.C, Chang, K.D, Yu, C.
Deposit date:1994-03-12
Release date:1994-11-01
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Cardiotoxin III from the Taiwan cobra (Naja naja atra). Determination of structure in solution and comparison with short neurotoxins.
J.Mol.Biol., 235, 1994
3ZTF
DownloadVisualize
BU of 3ztf by Molmil
X-ray Structure of the Cyan Fluorescent Protein mTurquoise2 (K206A mutant)
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:von Stetten, D, Goedhart, J, Noirclerc-Savoye, M, Lelimousin, M, Joosen, L, Hink, M.A, van Weeren, L, Gadella, T.W.J, Royant, A.
Deposit date:2011-07-07
Release date:2012-03-21
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Structure-Guided Evolution of Cyan Fluorescent Proteins Towards a Quantum Yield of 93%
Nat.Commun, 3, 2012
2X8K
DownloadVisualize
BU of 2x8k by Molmil
Crystal Structure of SPP1 Dit (gp 19.1) Protein, a Paradigm of Hub Adsorption Apparatus in Gram-positive Infecting Phages.
Descriptor: HYPOTHETICAL PROTEIN 19.1
Authors:Veesler, D, Robin, G, Lichiere, J, Auzat, I, Tavares, P, Bron, P, Campanacci, V, Cambillau, C.
Deposit date:2010-03-10
Release date:2010-09-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal Structure of Bacteriophage Spp1 Distal Tail Protein (Gp 19.1): A Baseplate Hub Paradigm in Gram+ Infecting Phages.
J.Biol.Chem., 285, 2010
5K29
DownloadVisualize
BU of 5k29 by Molmil
Trypanosoma brucei bromodomain BDF5 (Tb427tmp.01.5000)
Descriptor: UNKNOWN ATOM OR ION, uncharacterized protein BDF5
Authors:Lin, Y.H, Tempel, W, Walker, J.R, Loppnau, P, Amani, M, Hou, C.F.D, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Hui, R, Structural Genomics Consortium (SGC)
Deposit date:2016-05-18
Release date:2016-07-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Trypanosoma brucei bromodomain BDF5 (Tb427tmp.01.5000)
To Be Published
4Y4P
DownloadVisualize
BU of 4y4p by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Polikanov, Y.S, Melnikov, S.V, Soll, D, Steitz, T.A.
Deposit date:2015-02-10
Release date:2015-03-18
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly.
Nat.Struct.Mol.Biol., 22, 2015
8BV0
DownloadVisualize
BU of 8bv0 by Molmil
Binary complex between the NB-ARC domain from the Tomato immune receptor NRC1 and the SPRY domain-containing effector SS15 from the potato cyst nematode
Descriptor: ADENOSINE-5'-DIPHOSPHATE, NRC1, Truncated secreted SPRY domain-containing protein 15 (Fragment)
Authors:Contreras, M.P, Pai, H, Muniyandi, S, Toghani, A, Lawson, D.M, Tumtas, Y, Duggan, C, Yuen, E.L.H, Stevenson, C.E.M, Harant, A, Wu, C.H, Bozkurt, T.O, Kamoun, S, Derevnina, L.
Deposit date:2022-12-01
Release date:2022-12-21
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Resurrection of plant disease resistance proteins via helper NLR bioengineering.
Sci Adv, 9, 2023
3ZWU
DownloadVisualize
BU of 3zwu by Molmil
Pseudomonas fluorescens PhoX in complex with vanadate, a transition state analogue
Descriptor: ALKALINE PHOSPHATASE PHOX, CALCIUM ION, CHLORIDE ION, ...
Authors:Yong, S.C, Roversi, P, Lillington, J.E.D, Zeldin, O.B, Garman, E.F, Lea, S.M, Berks, B.C.
Deposit date:2011-08-02
Release date:2012-08-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:A Complex Iron-Calcium Cofactor Catalyzing Phosphotransfer Chemistry
Science, 345, 2014
8C5I
DownloadVisualize
BU of 8c5i by Molmil
Cyanide dihydratase from Bacillus pumilus C1 variant - Q86R,H305K,H308K,H323K
Descriptor: Cyanide dihydratase
Authors:Mulelu, A.E, Reitz, J, van Rooyen, J, Scheffer, M, Frangakis, A.S, Dlamini, L.S, Woodward, J.D, Benedik, M.J, Sewell, B.T.
Deposit date:2023-01-09
Release date:2023-01-18
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:The Role of Histidine Residues in the Oligomerization of Cyanide Dihydratase from Bacillus pumilus C1
To Be Published
8BVZ
DownloadVisualize
BU of 8bvz by Molmil
Spatial structure of amyloidogenic SEM1(49-67) peptide
Descriptor: Alpha-inhibin-31
Authors:Semenova, E.A, Yulmetov, A.R, Osetrina, D.A, Blokhin, D.S.
Deposit date:2022-12-06
Release date:2023-01-18
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Spatial structure of amyloidogenic SEM1(49-67) peptide
To Be Published
5KGG
DownloadVisualize
BU of 5kgg by Molmil
Crystal structure of PIM1 with inhibitor: 2-(5-chloranyl-1~{H}-indol-3-yl)ethanamine
Descriptor: 1,2-ETHANEDIOL, 2-(5-chloranyl-1~{H}-indol-3-yl)ethanamine, CHLORIDE ION, ...
Authors:Ferguson, A.D.
Deposit date:2016-06-13
Release date:2017-08-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of PIM1 in complex with inhibitor
To Be Published
1K9H
DownloadVisualize
BU of 1k9h by Molmil
NMR structure of DNA TGTGAGCGCTCACA
Descriptor: 5'-D(*TP*GP*TP*GP*AP*GP*CP*GP*CP*TP*CP*AP*CP*A)-3'
Authors:Kaluarachchi, K, Gorenstein, D.G, Luxon, B.A.
Deposit date:2001-10-29
Release date:2001-11-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:How Do Proteins Recognize DNA? Solution Structure and Local Conformational Dynamics of Lac Operators by 2D NMR
J.Biomol.Struct.Dyn., Conversation 11, 2000

227344

数据于2024-11-13公开中

PDB statisticsPDBj update infoContact PDBjnumon