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PDB: 53012 件

7MVU
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Single particle cryo-EM structure of the Chaetomium thermophilum Nup192-Nic96 complex (Nup192 residues 1-1756; Nic96 residues 240-301)
分子名称: Nucleoporin NIC96, Nucleoporin NUP192
著者Petrovic, S, Samanta, D, Perriches, T, Bley, C.J, Thierbach, K, Brown, B, Nie, S, Mobbs, G.W, Stevens, T.A, Liu, X, Tomaleri, G.P, Schaus, L, Hoelz, A.
登録日2021-05-15
公開日2022-06-15
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.77 Å)
主引用文献Architecture of the linker-scaffold in the nuclear pore.
Science, 376, 2022
6E5W
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Crystal structure of human cellular retinol binding protein 3 in complex with abnormal-cannabidiol (abn-CBD)
分子名称: (1'R,2'R)-5'-methyl-6-pentyl-2'-(prop-1-en-2-yl)-1',2',3',4'-tetrahydro[1,1'-biphenyl]-2,4-diol, GLYCEROL, Retinol-binding protein 5
著者Silvaroli, J.A, Banerjee, S, Kiser, P.D, Golczak, M.
登録日2018-07-23
公開日2019-02-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Abnormal Cannabidiol Modulates Vitamin A Metabolism by Acting as a Competitive Inhibitor of CRBP1.
Acs Chem.Biol., 14, 2019
8G4W
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Cryo-EM consensus structure of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase plus preQ1 ligand
分子名称: 7-DEAZA-7-AMINOMETHYL-GUANINE, DNA (31-MER), DNA (39-mer), ...
著者Porta, J.C, Chauvier, A, Deb, I, Ellinger, E, Frank, A.T, Meze, K, Ohi, M.D, Walter, N.G.
登録日2023-02-10
公開日2023-06-21
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural basis for control of bacterial RNA polymerase pausing by a riboswitch and its ligand.
Nat.Struct.Mol.Biol., 30, 2023
7RMN
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Crystal structure of triosephosphate isomerase from Verrucomicrobium spinosum
分子名称: Triosephosphate isomerase
著者Vickers, C.J, Fraga, D, Patrick, W.M.
登録日2021-07-27
公開日2022-08-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Structure of VspTPI - Verrucomicrobium spinosum triosephoshate isomerase
To be published
8G8Z
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Cryo-EM structure of 3DVA component 1 of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase plus preQ1 ligand
分子名称: 7-DEAZA-7-AMINOMETHYL-GUANINE, DNA (31-MER), DNA (39-MER), ...
著者Porta, J.C, Ohi, M.D, Walter, N.G, Frank, A.T, Deb, I, Meze, K.
登録日2023-02-20
公開日2023-06-21
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structural basis for control of bacterial RNA polymerase pausing by a riboswitch and its ligand.
Nat.Struct.Mol.Biol., 30, 2023
5L3J
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ESCHERICHIA COLI DNA GYRASE B IN COMPLEX WITH BENZOTHIAZOLE-BASED INHIBITOR
分子名称: 2-[[2-[[4,5-bis(bromanyl)-1~{H}-pyrrol-2-yl]carbonylamino]-1,3-benzothiazol-6-yl]amino]-2-oxidanylidene-ethanoic acid, DNA gyrase subunit B, IODIDE ION
著者Gjorgjieva, M, Tomasic, T, Barancokova, M, Katsamakas, S, Ilas, J, Montalvao, S, Tammella, P, Peterlin Masic, L, Kikelj, D.
登録日2016-05-23
公開日2016-08-31
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Discovery of Benzothiazole Scaffold-Based DNA Gyrase B Inhibitors.
J.Med.Chem., 59, 2016
7MVY
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Single particle cryo-EM structure of the Chaetomium thermophilum Nup188-Nic96 complex (Nup188 residues 1-1858; Nic96 residues 240-301)
分子名称: Nucleoporin NIC96, Nucleoporin NUP188
著者Petrovic, S, Samanta, D, Perriches, T, Bley, C.J, Thierbach, K, Brown, B, Nie, S, Mobbs, G.W, Stevens, T.A, Liu, X, Tomaleri, G.P, Schaus, L, Hoelz, A.
登録日2021-05-15
公開日2022-06-15
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.39 Å)
主引用文献Architecture of the linker-scaffold in the nuclear pore.
Science, 376, 2022
3GMD
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Structure-based design of 7-Azaindole-pyrrolidines as inhibitors of 11beta-Hydroxysteroid-Dehydrogenase type I
分子名称: 2-methyl-3-{(3S)-1-[(1-pyridin-2-ylcyclopropyl)carbonyl]pyrrolidin-3-yl}-1H-pyrrolo[2,3-b]pyridine, Corticosteroid 11-beta-dehydrogenase isozyme 1, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Valeur, E, Lepifre, F, Roche, D, Christmann-Franck, S, Hillertz, P, Musil, D.
登録日2009-03-13
公開日2010-11-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structure-based design of 7-azaindole-pyrrolidine amides as inhibitors of 11 beta-hydroxysteroid dehydrogenase type I.
Bioorg.Med.Chem.Lett., 22, 2012
7MW0
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Crystal structure of Homo sapiens NUP93 solenoid (residues 174-819)
分子名称: 1,2-ETHANEDIOL, Nuclear pore complex protein Nup93
著者Petrovic, S, Samanta, D, Perriches, T, Bley, C.J, Thierbach, K, Brown, B, Nie, S, Mobbs, G.W, Stevens, T.A, Liu, X, Tomaleri, G.P, Schaus, L, Hoelz, A.
登録日2021-05-15
公開日2022-06-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Architecture of the linker-scaffold in the nuclear pore.
Science, 376, 2022
5L1U
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BU of 5l1u by Molmil
X-ray Structure of M81A mutant of Cytochrome P450 PntM with pentalenolactone F
分子名称: PROTOPORPHYRIN IX CONTAINING FE, Pentalenolactone synthase, pentalenolactone F
著者Duan, L, Jogl, G, Cane, D.E.
登録日2016-07-29
公開日2016-09-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.074 Å)
主引用文献The Cytochrome P450-Catalyzed Oxidative Rearrangement in the Final Step of Pentalenolactone Biosynthesis: Substrate Structure Determines Mechanism.
J.Am.Chem.Soc., 138, 2016
4WXQ
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BU of 4wxq by Molmil
Crystal Structure of the Myocilin Olfactomedin Domain
分子名称: CALCIUM ION, HEXAETHYLENE GLYCOL, Myocilin, ...
著者Orwig, S.D, Turnage, K.C, Donegan, R.K, Lieberman, R.L.
登録日2014-11-14
公開日2015-04-01
最終更新日2017-09-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural basis for misfolding in myocilin-associated glaucoma.
Hum.Mol.Genet., 24, 2015
5XG5
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Crystal structure of Mitsuba-1 with bound NAcGal
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, MITSUBA-1
著者Terada, D, Voet, A.R.D, Kamata, K, Zhang, K.Y.J, Tame, J.R.H.
登録日2017-04-12
公開日2017-07-12
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Computational design of a symmetrical beta-trefoil lectin with cancer cell binding activity.
Sci Rep, 7, 2017
6ZLX
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BU of 6zlx by Molmil
The structure of the ClpX-associated factor PDIP38
分子名称: PLATINUM (II) ION, Polymerase delta-interacting protein 2
著者Zeth, K, Dougan, D.
登録日2020-07-01
公開日2021-07-14
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (3.394 Å)
主引用文献PDIP38 is a novel adaptor-like modulator of the mitochondrial AAA+ protease CLPXP
To Be Published
6EI9
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BU of 6ei9 by Molmil
Crystal structure of E. coli tRNA-dihydrouridine synthase B (DusB)
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
著者Bou-Nader, C, Hamdane, D.
登録日2017-09-18
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Unveiling structural and functional divergences of bacterial tRNA dihydrouridine synthases: perspectives on the evolution scenario.
Nucleic Acids Res., 46, 2018
7OYB
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BU of 7oyb by Molmil
Cryo-EM structure of the 6 hpf zebrafish embryo 80S ribosome
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A.
登録日2021-06-24
公開日2022-07-13
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献A molecular network of conserved factors keeps ribosomes dormant in the egg.
Nature, 613, 2023
7R6P
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BU of 7r6p by Molmil
Solution structure of peptide toxin MIITX2-Mg1a from the venom of the Australian giant red bull ant Myrmecia gulosa
分子名称: U-myrmeciitoxin(02)-Mg1a
著者Chin, Y.K, Eagle, D, Bankala, K, Robinson, S.D.
登録日2021-06-23
公開日2022-02-09
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献A peptide toxin in ant venom mimics vertebrate EGF-like hormones to cause long-lasting hypersensitivity in mammals.
Proc.Natl.Acad.Sci.USA, 119, 2022
6ZOI
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A lid blocking mechanism of a cone snail toxin revealed at the atomic level
分子名称: Conknunitzin-C3 mutante
著者Saikia, C, Altman-Gueta, H, Dym, O, Frolow, F, Gurevitz, M, Gordon, D, Reuveny, E, Karbat, I.
登録日2020-07-07
公開日2021-07-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.798 Å)
主引用文献A lid blocking mechanism of a cone snail toxin revealed at the atomic level
To Be Published
7OYA
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BU of 7oya by Molmil
Cryo-EM structure of the 1 hpf zebrafish embryo 80S ribosome
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A.
登録日2021-06-24
公開日2022-07-13
最終更新日2023-02-08
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献A molecular network of conserved factors keeps ribosomes dormant in the egg.
Nature, 613, 2023
6QUH
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BU of 6quh by Molmil
GHK tagged GFP variant crystal form II at 1.34A wavelength
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, COPPER (II) ION, ...
著者Huyton, T, Gorlich, D.
登録日2019-02-27
公開日2020-05-27
最終更新日2022-12-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography.
Acta Crystallogr D Struct Biol, 76, 2020
5L8Z
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Structure of thermostable DNA-binding HU protein from micoplasma Spiroplasma melliferum
分子名称: DNA-binding protein, SODIUM ION
著者Boyko, K.M, Gorbacheva, M.A, Rakitina, T.V, Korzhenevskiy, D.A, Kamashev, D.E, Vanyushkina, A.A, Lipkin, A.V, Popov, V.O.
登録日2016-06-09
公開日2016-06-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural basis of the high thermal stability of the histone-like HU protein from the mollicute Spiroplasma melliferum KC3.
Sci Rep, 6, 2016
8SZE
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Crystal structure of Yersinia pestis dihydrofolate reductase in complex with Trimethoprim
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Dihydrofolate reductase, ...
著者Shaw, G.X, Cherry, S, Tropea, J.E, Waugh, D.S, Ji, X.
登録日2023-05-29
公開日2023-06-07
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of Yersinia pestis dihydrofolate reductase in complex with Trimethoprim
To be published
6ZWK
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Crystal structure of the phosphorylated C-terminal tail of histone H2AX in complex with a specific nanobody (C6 gammaXbody)
分子名称: CHLORIDE ION, Histone H2AX, SODIUM ION, ...
著者McEwen, A.G, Moeglin, E, Desplancq, D, Weiss, E, Poterszman, A.
登録日2020-07-28
公開日2021-07-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献A Novel Nanobody Precisely Visualizes Phosphorylated Histone H2AX in Living Cancer Cells under Drug-Induced Replication Stress.
Cancers (Basel), 13, 2021
6ED0
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BU of 6ed0 by Molmil
OhrA (Organic Hydroperoxide Resistance protein) mutant (C61S) in the "open conformation" from chromobacterium violaceum
分子名称: Organic hydroperoxide resistance protein, SULFATE ION
著者Domingos, R.M, Teixeira, R.D, Alegria, T.G.P, Netto, L.E.S.
登録日2018-08-08
公開日2020-02-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Substrate and product-assisted catalysis: molecular aspects behind structural switches along Organic Hydroperoxide Resistance Protein catalytic cycle
Acs Catalysis, 2020
8SZD
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BU of 8szd by Molmil
Crystal structure of Yersinia pestis dihydrofolate reductase at 1.25-A resolution
分子名称: CHLORIDE ION, Dihydrofolate reductase, MAGNESIUM ION, ...
著者Shaw, G.X, Cherry, S, Tropea, J.E, Waugh, D.S, Ji, X.
登録日2023-05-29
公開日2023-06-07
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal structure of Yersinia pestis dihydrofolate reductase at 1.25-A resolution
To be published
8G7E
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BU of 8g7e by Molmil
Cryo-EM structure of 3DVA component 0 of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase plus preQ1 ligand
分子名称: 7-DEAZA-7-AMINOMETHYL-GUANINE, DNA (31-MER), DNA (39-mer), ...
著者Porta, J.C, Chauvier, A, Deb, I, Ellinger, E, Frank, A.T, Meze, K, Ohi, M.D, Walter, N.G.
登録日2023-02-16
公開日2023-06-21
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural basis for control of bacterial RNA polymerase pausing by a riboswitch and its ligand.
Nat.Struct.Mol.Biol., 30, 2023

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