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PDB: 52974 件

5CUW
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Crystal structure of Sortase E1 from Streptomyces coelicolor with tripeptide in the active site
分子名称: GLYCEROL, SrtE1
著者Kattke, M.D, Cascio, D, Sawaya, M.R, Clubb, R.T.
登録日2015-07-25
公開日2016-08-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.887 Å)
主引用文献Crystal structure of the first class E sortase transpeptidase, SrtE1 from Streptomyces coelicolor
To be published
4V0R
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DENGUE VIRUS FULL LENGTH NS5 COMPLEXED WITH GTP AND SAH
分子名称: FORMIC ACID, GLYCEROL, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Zhao, Y, Soh, S, Zheng, J, Phoo, W.W, Swaminathan, K, Cornvik, T.C, Lim, S.P, Shi, P.-Y, Lescar, J, Vasudevan, S.G, Luo, D.
登録日2014-09-18
公開日2015-01-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A Crystal Structure of the Dengue Virus Ns5 Protein Reveals a Novel Inter-Domain Interface Essential for Protein Flexibility and Virus Replication.
Plos Pathog., 11, 2015
7AOP
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Structure of NUDT15 in complex with inhibitor TH8321
分子名称: 2-azanyl-9-cyclohexyl-8-(2-methoxyphenyl)-3~{H}-purine-6-thione, MAGNESIUM ION, Nucleotide triphosphate diphosphatase NUDT15
著者Rehling, D, Zhang, S.M, Helleday, T, Stenmark, P.
登録日2020-10-14
公開日2021-06-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献NUDT15-mediated hydrolysis limits the efficacy of anti-HCMV drug ganciclovir.
Cell Chem Biol, 28, 2021
1TBQ
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CRYSTAL STRUCTURE OF INSECT DERIVED DOUBLE DOMAIN KAZAL INHIBITOR RHODNIIN IN COMPLEX WITH THROMBIN
分子名称: RHODNIIN, THROMBIN
著者Van De Locht, A, Lamba, D, Bode, W.
登録日1995-03-02
公開日1996-10-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Two heads are better than one: crystal structure of the insect derived double domain Kazal inhibitor rhodniin in complex with thrombin.
EMBO J., 14, 1995
4QPI
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Crystal structure of hepatitis A virus
分子名称: CHLORIDE ION, Capsid protein VP1, Capsid protein VP2, ...
著者Wang, X, Ren, J, Gao, Q, Hu, Z, Sun, Y, Li, X, Rowlands, D.J, Yin, W, Wang, J, Stuart, D.I, Rao, Z, Fry, E.E.
登録日2014-06-23
公開日2014-10-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Hepatitis A virus and the origins of picornaviruses.
Nature, 517, 2015
4V1O
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BU of 4v1o by Molmil
Architecture of the RNA polymerase II-Mediator core transcription initiation complex
分子名称: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ...
著者Plaschka, C, Lariviere, L, Wenzeck, L, Hemann, M, Tegunov, D, Petrotchenko, E.V, Borchers, C.H, Baumeister, W, Herzog, F, Villa, E, Cramer, P.
登録日2014-09-29
公開日2015-02-04
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (9.7 Å)
主引用文献Architecture of the RNA Polymerase II-Mediator Core Initiation Complex.
Nature, 518, 2015
7AOM
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BU of 7aom by Molmil
Structure of NUDT15 in complex with Ganciclovir triphosphate
分子名称: Ganciclovir triphosphate, MAGNESIUM ION, Nucleotide triphosphate diphosphatase NUDT15
著者Rehling, D, Zhang, S.M, Helleday, T, Stenmark, P.
登録日2020-10-14
公開日2021-06-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献NUDT15-mediated hydrolysis limits the efficacy of anti-HCMV drug ganciclovir.
Cell Chem Biol, 28, 2021
5DE5
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BU of 5de5 by Molmil
Crystal structure of the complex between human FMRP RGG motif and G-quadruplex RNA.
分子名称: Fragile X mental retardation protein 1, POTASSIUM ION, sc1
著者Vasilyev, N, Polonskaia, A, Darnell, J.C, Darnell, R.B, Patel, D.J, Serganov, A.
登録日2015-08-25
公開日2015-09-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.0011 Å)
主引用文献Crystal structure reveals specific recognition of a G-quadruplex RNA by a beta-turn in the RGG motif of FMRP.
Proc.Natl.Acad.Sci.USA, 112, 2015
5UX2
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Protein 19 with aldehyde deformylating oxidase activity from Synechococcus
分子名称: Aldehyde decarbonylase, FE (III) ION, PROPANOIC ACID
著者Wilson, D.K, Mak, W.S, Siegel, J.B.
登録日2017-02-21
公開日2018-02-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Protein 19 with aldehyde deformylating oxidase activity from Synechococcus
To Be Published
2V3S
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Structural insights into the recognition of substrates and activators by the OSR1 kinase
分子名称: ACETATE ION, SERINE/THREONINE-PROTEIN KINASE OSR1, SERINE/THREONINE-PROTEIN KINASE WNK4
著者Villa, F, Goebel, J, Rafiqi, F.H, Deak, M, Thastrup, J, Alessi, D.R, van Aalten, D.M.F.
登録日2007-06-21
公開日2007-07-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Insights Into the Recognition of Substrates and Activators by the Osr1 Kinase
Embo Rep., 8, 2007
2I89
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BU of 2i89 by Molmil
Structure of septuple mutant of Rat Outer Mitochondrial Membrane Cytochrome B5
分子名称: Cytochrome b5 type B, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE
著者Terzyan, S, Zhang, X.C, Benson, D.R, Wang, L, Sun, N.
登録日2006-09-01
公開日2006-10-31
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A histidine/tryptophan pi-stacking interaction stabilizes the heme-independent folding core of microsomal apocytochrome b5 relative to that of mitochondrial apocytochrome b5.
Biochemistry, 45, 2006
5V9H
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BU of 5v9h by Molmil
Structure of the H477R variant of rat cytosolic PEPCK in complex with phosphoglycolate and GDP.
分子名称: 2-PHOSPHOGLYCOLIC ACID, GUANOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, ...
著者Holyoak, T, Cui, D.S.
登録日2017-03-23
公開日2017-04-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Asymmetric Anchoring Is Required for Efficient Omega-Loop Opening and Closing in Cytosolic Phosphoenolpyruvate Carboxykinase.
Biochemistry, 56, 2017
6PLA
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BU of 6pla by Molmil
Adducts formed after 1 month in the reaction of dichlorido(1,3-dimethylbenzimidazol-2-ylidene)(eta6-p-cymene)osmium(II) with HEWL
分子名称: Lysozyme, OSMIUM ION, SODIUM ION, ...
著者Sullivan, M.P, Hartinger, C.G, Goldstone, D.C.
登録日2019-06-30
公開日2020-11-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Probing the Paradigm of Promiscuity for N-Heterocyclic Carbene Complexes and their Protein Adduct Formation.
Angew.Chem.Int.Ed.Engl., 2021
4W6H
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BU of 4w6h by Molmil
Crystal Structure of Full-Length Split GFP Mutant D190C Disulfide Dimer, P 65 Space Group
分子名称: fluorescent protein D190C
著者Leibly, D.J, Waldo, G.S, Yeates, T.O.
登録日2014-08-20
公開日2015-02-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.953 Å)
主引用文献A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
4W73
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BU of 4w73 by Molmil
Crystal Structure of Full-Length Split GFP Mutant E115C/T118H Disulfide Dimer P 21 21 21
分子名称: IMIDAZOLE, NICKEL (II) ION, fluorescent protein E115C/T118H
著者Leibly, D.J, Waldo, G.S, Yeates, T.O.
登録日2014-08-21
公開日2015-02-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
7AX0
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BU of 7ax0 by Molmil
Crystal structure of the computationally designed Scone-E protein co-crystallized with STA form a
分子名称: Keggin (STA), PHOSPHATE ION, SconeE
著者Mylemans, B, Vandebroek, L, Parac-Vogt, T.N, Voet, A.R.D.
登録日2020-11-09
公開日2021-06-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of Scone: pseudosymmetric folding of a symmetric designer protein.
Acta Crystallogr D Struct Biol, 77, 2021
5JUC
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BU of 5juc by Molmil
Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis in complex with Mn2+, uridine-diphosphate (UDP) and glucosyl-3-phosphoglycerate (GPG) - GpgS*GPG*UDP*Mn2+_2
分子名称: (2R)-2-(alpha-D-glucopyranosyloxy)-3-(phosphonooxy)propanoic acid, 1,2-ETHANEDIOL, Glucosyl-3-phosphoglycerate synthase, ...
著者Albesa-Jove, D, Sancho-Vaello, E, Rodrigo-Unzueta, A, Comino, N, Carreras-Gonzalez, A, Arrasate, P, Urresti, S, Guerin, M.E.
登録日2016-05-10
公開日2017-05-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Snapshots and Loop Dynamics along the Catalytic Cycle of Glycosyltransferase GpgS.
Structure, 25, 2017
2V6Y
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Structure of the MIT domain from a S. solfataricus Vps4-like ATPase
分子名称: AAA FAMILY ATPASE, P60 KATANIN, S,R MESO-TARTARIC ACID
著者Obita, T, Saksena, S, Ghazi-Tabatabai, S, Gill, D.J, Perisic, O, Emr, S.D, Williams, R.L.
登録日2007-07-24
公開日2007-10-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis for Selective Recognition of Escrt-III by the Aaa ATPase Vps4
Nature, 449, 2007
4W6F
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BU of 4w6f by Molmil
Crystal Structure of Full-Length Split GFP Mutant K26C Disulfide Dimer, P 32 2 1 Space Group, Form 2
分子名称: IMIDAZOLE, NICKEL (II) ION, fluorescent protein D21H/K26C
著者Leibly, D.J, Waldo, G.S, Yeates, T.O.
登録日2014-08-20
公開日2015-02-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
7AFL
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BU of 7afl by Molmil
Bacterial 30S ribosomal subunit assembly complex state D (multibody refinement for body domain of 30S ribosome)
分子名称: 16SrRNA, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
著者Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S.
登録日2020-09-19
公開日2021-07-07
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Sci Adv, 7, 2021
5D3P
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First bromodomain of BRD4 bound to inhibitor XD41
分子名称: 1-[(4-acetyl-3-ethyl-5-methyl-1H-pyrrol-2-yl)carbonyl]-N-methyl-1H-indole-6-sulfonamide, Bromodomain-containing protein 4, NICKEL (II) ION
著者Wohlwend, D, Huegle, M.
登録日2015-08-06
公開日2016-01-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献4-Acyl Pyrrole Derivatives Yield Novel Vectors for Designing Inhibitors of the Acetyl-Lysine Recognition Site of BRD4(1).
J.Med.Chem., 59, 2016
4UU0
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CRYSTAL STRUCTURE OF (SR) CALCIUM-ATPASE E2(TG) IN THE PRESENCE OF 14:1 PC
分子名称: GLYCEROL, MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, ...
著者Drachmann, N.D, Olesen, C, Moeller, J.V, Guo, Z, Nissen, P, Bublitz, M.
登録日2014-07-24
公開日2014-10-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Comparing Crystal Structures of Ca(2+) -ATPase in the Presence of Different Lipids.
FEBS J., 281, 2014
1JEB
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BU of 1jeb by Molmil
Chimeric Human/Mouse Carbonmonoxy Hemoglobin (Human Zeta2 / Mouse Beta2)
分子名称: CARBON MONOXIDE, HEMOGLOBIN BETA-SINGLE CHAIN, HEMOGLOBIN ZETA CHAIN, ...
著者Kidd, R.D, Russell, J.E, Watmough, N.J, Baker, E.N, Brittain, T.
登録日2001-06-17
公開日2002-01-23
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The role of beta chains in the control of the hemoglobin oxygen binding function: chimeric human/mouse proteins, structure, and function.
Biochemistry, 40, 2001
6P8O
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Structure of P. aeruginosa ATCC27853 HORMA2-deltaC
分子名称: CHLORIDE ION, HORMA domain containing protein, NICKEL (II) ION
著者Ye, Q, Corbett, K.D, Lau, R.K.
登録日2019-06-07
公開日2019-12-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.604 Å)
主引用文献HORMA Domain Proteins and a Trip13-like ATPase Regulate Bacterial cGAS-like Enzymes to Mediate Bacteriophage Immunity.
Mol.Cell, 77, 2020
1T0F
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Crystal Structure of the TnsA/TnsC(504-555) complex
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, MAGNESIUM ION, MALONIC ACID, ...
著者Ronning, D.R, Li, Y, Perez, Z.N, Ross, P.D, Hickman, A.B, Craig, N.L, Dyda, F.
登録日2004-04-08
公開日2004-11-09
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The carboxy-terminal portion of TnsC activates the Tn7 transposase through a specific interaction with TnsA.
Embo J., 23, 2004

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