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PDB: 52974 件

7ZRO
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The spatial structure of amyloidogenic SEM1(68-107) peptide
分子名称: Semenogelin-1
著者Sanchugova, D.A, Blokhin, D.S.
登録日2022-05-04
公開日2022-06-22
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献The spatial structure of amyloidogenic SEM1(68-107) peptide
To Be Published
1TJP
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Crystal Structure Of Wild-Type Tryptophan Synthase Complexed With 1-[(2-hydroxylphenyl)amino]3-glycerolphosphate
分子名称: 1-[(2-HYDROXYLPHENYL)AMINO]3-GLYCEROLPHOSPHATE, PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, ...
著者Kulik, V, Hartmann, E, Weyand, M, Frey, M, Gierl, A, Niks, D, Dunn, M.F, Schlichting, I.
登録日2004-06-07
公開日2005-12-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献On the structural basis of the catalytic mechanism and the regulation of the alpha subunit of tryptophan synthase from Salmonella typhimurium and BX1 from maize, two evolutionarily related enzymes.
J.Mol.Biol., 352, 2005
1TLO
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High resolution crystal structure of calpain I protease core in complex with E64
分子名称: CALCIUM ION, Calpain 1, large [catalytic] subunit, ...
著者Moldoveanu, T, Campbell, R.L, Cuerrier, D, Davies, P.L.
登録日2004-06-09
公開日2004-11-02
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structures of Calpain-E64 and -Leupeptin Inhibitor Complexes Reveal Mobile Loops Gating the Active Site
J.Mol.Biol., 343, 2004
7T9F
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Structure of VcINDY-apo
分子名称: DASS family sodium-coupled anion symporter
著者Sauer, D.B, Marden, J.J, Song, J.M, Wang, D.N.
登録日2021-12-19
公開日2022-05-25
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.23 Å)
主引用文献Structural basis of ion - substrate coupling in the Na + -dependent dicarboxylate transporter VcINDY.
Nat Commun, 13, 2022
3EQL
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Crystal structure of the T. Thermophilus RNA polymerase holoenzyme in complex with antibiotic myxopyronin
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Vassylyev, D.G, Vassylyeva, M.N, Artsimovitch, I.
登録日2008-09-30
公開日2008-10-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Transcription inactivation through local refolding of the RNA polymerase structure.
Nature, 457, 2009
4R6K
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Crystal structure of ABC transporter substrate-binding protein YesO from Bacillus subtilis, TARGET EFI-510761, an open conformation
分子名称: SODIUM ION, SOLUTE-BINDING PROTEIN
著者Patskovsky, Y, Toro, R, Bhosle, R, Al Obaidi, N, Chamala, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Lafleur, J, Siedel, R.D, Hillerich, B, Love, J, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2014-08-25
公開日2014-09-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of transporter Yeso from Bacillus subtilis, Target Efi-510761
To be Published
6J2E
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Crystal structure of bat (Pteropus Alecto) MHC class I Ptal-N*01:01 in complex with Ebola virus-derived peptide EBOV-NP1
分子名称: Beta-2-microglobulin, EBOV-NP1, MHC class I antigen
著者Lu, D, Liu, K.F, Yue, C, Lu, Q, Cheng, H, Chai, Y, Qi, J.X, Gao, G.F, Liu, W.J.
登録日2019-01-01
公開日2019-09-18
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Peptide presentation by bat MHC class I provides new insight into the antiviral immunity of bats.
Plos Biol., 17, 2019
1SUW
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Crystal structure of a NAD kinase from Archaeoglobus fulgidus in complex with its substrate and product: Insights into the catalysis of NAD kinase
分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Probable inorganic polyphosphate/ATP-NAD kinase
著者Liu, J, Lou, Y, Yokota, H, Adams, P.D, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
登録日2004-03-26
公開日2004-08-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal Structures of an NAD Kinase from Archaeoglobus fulgidus in Complex with ATP, NAD, or NADP
J.Mol.Biol., 354, 2005
2WGO
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Structure of ranaspumin-2, a surfactant protein from the foam nests of a tropical frog
分子名称: RANASPUMIN-2
著者Mackenzie, C.D, Smith, B.O, Kennedy, M.W, Cooper, A.
登録日2009-04-21
公開日2009-06-23
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Ranaspumin-2: Structure and Function of a Surfactant Protein from the Foam Nests of a Tropical Frog.
Biophys.J., 96, 2009
8A9O
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Structure of the polyamine acetyltransferase DpA
分子名称: ACETYL COENZYME *A, BROMIDE ION, COENZYME A, ...
著者Garcia-Pino, A, Jurenas, D.
登録日2022-06-28
公開日2023-07-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.587 Å)
主引用文献A polyamine acetyltransferase regulates the motility and biofilm formation of Acinetobacter baumannii.
Nat Commun, 14, 2023
8A9N
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Structure of DpA polyamine acetyltransferase in complex with 1,3-DAP
分子名称: 1,3-DIAMINOPROPANE, Acetyltransferase, COENZYME A, ...
著者Garcia-Pino, A, Jurenas, D.
登録日2022-06-28
公開日2023-07-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.854 Å)
主引用文献A polyamine acetyltransferase regulates the motility and biofilm formation of Acinetobacter baumannii.
Nat Commun, 14, 2023
4RJD
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TFP bound in alternate orientations to calcium-saturated Calmodulin C-Domains
分子名称: 10-[3-(4-METHYL-PIPERAZIN-1-YL)-PROPYL]-2-TRIFLUOROMETHYL-10H-PHENOTHIAZINE, CALCIUM ION, CHLORIDE ION, ...
著者Feldkamp, M.D, Gakhar, L, Pandey, N, Shea, M.A.
登録日2014-10-08
公開日2015-08-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Opposing orientations of the anti-psychotic drug trifluoperazine selected by alternate conformations of M144 in calmodulin.
Proteins, 83, 2015
6J9Q
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Crystal structure of Trypanosoma brucei gambiense glycerol kinase complex with AMP-PNP.
分子名称: GLYCEROL, Glycerol kinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Balogun, E.O, Chishima, T, Ichinose, M, Inaoka, D.K, Kido, Y, Ibrahim, B, de Koning, H, McKerrow, J.H, Watanabe, Y, Nozaki, T, Michels, P.A.M, Harada, S, Kita, K, Shiba, T.
登録日2019-01-24
公開日2020-01-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Reaction mechanism of the reverse reaction of African human trypanosomes glycerol kinase.
To Be Published
1T27
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THE STRUCTURE OF PITP COMPLEXED TO PHOSPHATIDYLCHOLINE
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Phosphatidylinositol transfer protein alpha isoform
著者Yoder, M.D, Thomas, L.M, Tremblay, J.M, Oliver, R.L, Yarbrough, L.R, Helmkamp Jr, G.M.
登録日2004-04-20
公開日2004-05-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献STRUCTURE OF A MULTIFUNCTIONAL PROTEIN. MAMMALIAN PHOSPHATIDYLINOSITOL TRANSFER PROTEIN COMPLEXED WITH PHOSPHATIDYLCHOLINE
J.Biol.Chem., 276, 2001
1T3P
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Half-sandwich arene ruthenium(II)-enzyme complex
分子名称: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
著者McNae, I.W, Fishburne, K, Habtemariam, A, Hunter, T.M, Melchart, M, Wang, F, Walkinshaw, M.D, Sadler, P.J.
登録日2004-04-27
公開日2005-07-26
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Half-sandwich arene ruthenium(II)-enzyme complex
CHEM.COMMUN.(CAMB.), 16, 2004
1T5N
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Structural transitions as determinants of calcium-dependent antibiotic daptomycin
分子名称: DAPTOMYCIN, DECANOIC ACID
著者Jung, D, Rozek, A, Okon, M, Hancock, R.E.
登録日2004-05-04
公開日2004-08-31
最終更新日2019-11-06
実験手法SOLUTION NMR
主引用文献Structural Transitions as Determinants of the Action of the Calcium-Dependent Antibiotic Daptomycin.
Chem.Biol., 11, 2004
3EUL
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Structure of the signal receiver domain of the putative response regulator NarL from Mycobacterium tuberculosis
分子名称: CHLORIDE ION, POSSIBLE NITRATE/NITRITE RESPONSE TRANSCRIPTIONAL REGULATORY PROTEIN NARL (DNA-binding response regulator, LuxR family)
著者Schneider, G, Schnell, R, Agren, D.
登録日2008-10-10
公開日2008-11-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献1.9 A structure of the signal receiver domain of the putative response regulator NarL from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.F, 64, 2008
4RKP
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Crystal Structure of Mevalonate-3-Kinase from Thermoplasma acidophilum (apo form)
分子名称: ACETATE ION, Putative uncharacterized protein Ta1305, SULFATE ION
著者Vinokur, J.M, Cascio, D, Sawaya, M.R, Bowie, J.U.
登録日2014-10-13
公開日2014-12-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural analysis of mevalonate-3-kinase provides insight into the mechanisms of isoprenoid pathway decarboxylases.
Protein Sci., 24, 2015
4RKZ
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Crystal Structure of Mevalonate-3-Kinase from Thermoplasma acidophilum (Mevalonate 3-Phosphate/ADP Bound)
分子名称: (3R)-5-hydroxy-3-methyl-3-(phosphonooxy)pentanoic acid, ADENOSINE-5'-DIPHOSPHATE, Putative uncharacterized protein Ta1305, ...
著者Vinokur, J.M, Cascio, D, Sawaya, M.R, Bowie, J.U.
登録日2014-10-14
公開日2014-12-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural analysis of mevalonate-3-kinase provides insight into the mechanisms of isoprenoid pathway decarboxylases.
Protein Sci., 24, 2015
5KZK
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Crystal Structure of rRNA methyltransferase from Sinorhizobium meliloti
分子名称: COBALT (II) ION, Probable RNA methyltransferase, TrmH family, ...
著者Dey, D, Hegde, R.P, Almo, S.C, Ramakumar, S, Ramagopal, U.A, New York Structural Genomics Research Consortium (NYSGRC)
登録日2016-07-25
公開日2017-08-02
最終更新日2019-11-20
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Crystal Structure of rRNA methyltransferase from Sinorhizobium meliloti
To Be Published
6J2G
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Crystal structure of bat (Pteropus Alecto) MHC class I Ptal-N*01:01 in complex with Ebola virus-derived peptide EBOV-NP2
分子名称: Beta-2-microglobulin, EBOV-NP2, Ptal-N*01:01
著者Lu, D, Liu, K.F, Yue, C, Lu, Q, Cheng, H, Chai, Y, Qi, J.X, Gao, G.F, Liu, W.J.
登録日2019-01-01
公開日2019-09-18
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Peptide presentation by bat MHC class I provides new insight into the antiviral immunity of bats.
Plos Biol., 17, 2019
5KIK
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CmlA beta-hydroxylase in chemically reduced diferrous state
分子名称: CmlA protein, FE (III) ION, GLYCEROL, ...
著者Knoot, C.J, Lipscomb, J.D.
登録日2016-06-16
公開日2017-04-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Carboxylate Shift Regulates Dioxygen Activation by the Diiron Nonheme beta-Hydroxylase CmlA upon Binding of a Substrate-Loaded Nonribosomal Peptide Synthetase.
Biochemistry, 55, 2016
5KTZ
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expanded poliovirus in complex with VHH 12B
分子名称: Genome polyprotein, VHH 12B, VP1, ...
著者Strauss, M, Schotte, L, Filman, D.J, Hogle, J.M.
登録日2016-07-12
公開日2016-11-02
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Cryo-electron Microscopy Structures of Expanded Poliovirus with VHHs Sample the Conformational Repertoire of the Expanded State.
J. Virol., 91, 2017
7T1U
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Crystal structure of a superbinder Src SH2 domain (sSrcF) in complex with a high affinity phosphopeptide
分子名称: Proto-oncogene tyrosine-protein kinase Src, Synthetic phosphopeptide, ZINC ION
著者Martyn, G.D, Singer, A.U, Manczyk, N, Veggiani, G, Kurinov, I, Sicheri, F, Sidhu, S.S.
登録日2021-12-02
公開日2022-08-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Engineered SH2 Domains for Targeted Phosphoproteomics.
Acs Chem.Biol., 17, 2022
7TGK
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Crystal structure of ATP bound DesD, the desferrioxamine synthetase from the Streptomyces griseoflavus ferrimycin biosynthetic pathway
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Patel, K.D, Gulick, A.M.
登録日2022-01-07
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献An acyl-adenylate mimic reveals the structural basis for substrate recognition by the iterative siderophore synthetase DesD.
J.Biol.Chem., 298, 2022

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