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PDB: 266 件

2L0Q
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NMR Solution Structure of Vibrio harveyi Acyl Carrier Protein (ACP)
分子名称: Acyl carrier protein
著者Chan, D.I, Chu, B.C.H, Lau, C.K.Y, Hunter, H.N, Byers, D.M, Vogel, H.J.
登録日2010-07-12
公開日2010-07-21
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献NMR solution structure and biophysical characterization of Vibrio harveyi acyl carrier protein A75H: effects of divalent metal ions.
J.Biol.Chem., 285, 2010
6P5V
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Structure of DCN1 bound to N-((4S,5S)-7-ethyl-4-(4-fluorophenyl)-3-methyl-6-oxo-1-phenyl-4,5,6,7-tetrahydro-1H-pyrazolo[3,4-b]pyridin-5-yl)-3-methylbenzamide
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Lysozyme,DCN1-like protein 1 fusion, N-[(4S,5S)-1-[(1S)-cyclohex-3-en-1-yl]-7-ethyl-4-(4-fluorophenyl)-3-methyl-6-oxo-4,5,6,7-tetrahydro-1H-pyrazolo[3,4-b]pyridin-5-yl]-3-methylbenzamide
著者Guy, R.K, Kim, H.S, Hammill, J.T, Scott, D.C, Schulman, B.A.
登録日2019-05-31
公開日2019-09-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.398 Å)
主引用文献Discovery of Novel Pyrazolo-pyridone DCN1 Inhibitors Controlling Cullin Neddylation.
J.Med.Chem., 62, 2019
4V5Y
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BU of 4v5y by Molmil
Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Borovinskaya, M.A, Pai, R.D, Zhang, W, Schuwirth, B.-S, Holton, J.M, Hirokawa, G, Kaji, H, Kaji, A, Cate, J.H.D.
登録日2007-06-19
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (4.45 Å)
主引用文献Structural basis for aminoglycoside inhibition of bacterial ribosome recycling.
Nat.Struct.Mol.Biol., 14, 2007
4V53
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Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.
分子名称: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, 16S rRNA, 23S rRNA, ...
著者Borovinskaya, M.A, Pai, R.D, Zhang, W, Schuwirth, B.-S, Holton, J.M, Hirokawa, G, Kaji, H, Kaji, A, Cate, J.H.D.
登録日2007-06-16
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.54 Å)
主引用文献Structural basis for aminoglycoside inhibition of bacterial ribosome recycling.
Nat.Struct.Mol.Biol., 14, 2007
1TT5
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BU of 1tt5 by Molmil
Structure of APPBP1-UBA3-Ubc12N26: a unique E1-E2 interaction required for optimal conjugation of the ubiquitin-like protein NEDD8
分子名称: Ubiquitin-conjugating enzyme E2 M, ZINC ION, amyloid protein-binding protein 1, ...
著者Huang, D.T, Miller, D.W, Mathew, R, Cassell, R, Holton, J.M, Roussel, M.F, Schulman, B.A.
登録日2004-06-21
公開日2004-09-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A unique E1-E2 interaction required for optimal conjugation of the ubiquitin-like protein NEDD8.
Nat.Struct.Mol.Biol., 11, 2004
6SWY
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Structure of active GID E3 ubiquitin ligase complex minus Gid2 and delta Gid9 RING domain
分子名称: Glucose-induced degradation protein 8, Protein FYV10,Protein FYV10,Protein FYV10,Protein FYV10,Protein FYV10,Protein FYV10,Protein FYV10, Vacuolar import and degradation protein 24, ...
著者Qiao, S, Prabu, J.R, Schulman, B.A.
登録日2019-09-24
公開日2019-11-20
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Interconversion between Anticipatory and Active GID E3 Ubiquitin Ligase Conformations via Metabolically Driven Substrate Receptor Assembly
Mol.Cell, 77, 2020
3FN1
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BU of 3fn1 by Molmil
E2-RING expansion of the NEDD8 cascade confers specificity to cullin modification.
分子名称: NEDD8-activating enzyme E1 catalytic subunit, NEDD8-conjugating enzyme UBE2F
著者Huang, D.T, Ayrault, O, Hunt, H.W, Taherbhoy, A.M, Duda, D.M, Scott, D.C, Borg, L.A, Neale, G, Murray, P.J, Roussel, M.F, Schulman, B.A.
登録日2008-12-22
公開日2009-03-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献E2-RING expansion of the NEDD8 cascade confers specificity to cullin modification
Mol.Cell, 33, 2009
8AKU
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250 A SynPspA rod after incubation with ATP
分子名称: Chloroplast membrane-associated 30 kD protein
著者Junglas, B, Hudina, E, Schoennenbeck, P, Ritter, I, Santiago-Schuebel, B, Huesgen, P, Sachse, C.
登録日2022-07-31
公開日2024-02-14
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Non-canonical ATPase activity drives PspA membrane constriction
To Be Published
8AKY
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BU of 8aky by Molmil
290 A SynPspA rod after incubation with ATP
分子名称: Chloroplast membrane-associated 30 kD protein
著者Junglas, B, Hudina, E, Schoennenbeck, P, Ritter, I, Santiago-Schuebel, B, Huesgen, P, Sachse, C.
登録日2022-07-31
公開日2024-02-14
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Non-canonical ATPase activity drives PspA membrane constriction
To Be Published
8AKZ
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BU of 8akz by Molmil
320 A SynPspA rod after incubation with ATP
分子名称: Chloroplast membrane-associated 30 kD protein
著者Junglas, B, Hudina, E, Schoennenbeck, P, Ritter, I, Santiago-Schuebel, B, Huesgen, P, Sachse, C.
登録日2022-07-31
公開日2024-02-14
実験手法ELECTRON MICROSCOPY (6.9 Å)
主引用文献Non-canonical ATPase activity drives PspA membrane constriction
To Be Published
8AKQ
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BU of 8akq by Molmil
180 A SynPspA rod after incubation with ATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chloroplast membrane-associated 30 kD protein
著者Junglas, B, Hudina, E, Schoennenbeck, P, Ritter, I, Santiago-Schuebel, B, Huesgen, P, Sachse, C.
登録日2022-07-31
公開日2024-02-14
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Non-canonical ATPase activity drives PspA membrane constriction
To Be Published
8AKR
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BU of 8akr by Molmil
200 A SynPspA rod after incubation with ATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chloroplast membrane-associated 30 kD protein
著者Junglas, B, Hudina, E, Schoennenbeck, P, Ritter, I, Santiago-Schuebel, B, Huesgen, P, Sachse, C.
登録日2022-07-31
公開日2024-02-14
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Non-canonical ATPase activity drives PspA membrane constriction
To Be Published
8AKT
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BU of 8akt by Molmil
235 A SynPspA rod after incubation with ATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chloroplast membrane-associated 30 kD protein
著者Junglas, B, Hudina, E, Schoennenbeck, P, Ritter, I, Santiago-Schuebel, B, Huesgen, P, Sachse, C.
登録日2022-07-31
公開日2024-02-14
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Non-canonical ATPase activity drives PspA membrane constriction
To Be Published
8AKS
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BU of 8aks by Molmil
215 A SynPspA rod after incubation with ATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chloroplast membrane-associated 30 kD protein
著者Junglas, B, Hudina, E, Schoennenbeck, P, Ritter, I, Santiago-Schuebel, B, Huesgen, P, Sachse, C.
登録日2022-07-31
公開日2024-02-14
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Non-canonical ATPase activity drives PspA membrane constriction
To Be Published
8AL0
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BU of 8al0 by Molmil
365 A SynPspA rod after incubation with ATP
分子名称: Chloroplast membrane-associated 30 kD protein
著者Junglas, B, Hudina, E, Schoennenbeck, P, Ritter, I, Santiago-Schuebel, B, Huesgen, P, Sachse, C.
登録日2022-07-31
公開日2024-02-14
実験手法ELECTRON MICROSCOPY (6.9 Å)
主引用文献Non-canonical ATPase activity drives PspA membrane constriction
To Be Published
8AKX
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BU of 8akx by Molmil
305 A SynPspA rod after incubation with ATP
分子名称: Chloroplast membrane-associated 30 kD protein
著者Junglas, B, Hudina, E, Schoennenbeck, P, Ritter, I, Santiago-Schuebel, B, Huesgen, P, Sachse, C.
登録日2022-07-31
公開日2024-02-14
実験手法ELECTRON MICROSCOPY (6.6 Å)
主引用文献Non-canonical ATPase activity drives PspA membrane constriction
To Be Published
8AKV
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BU of 8akv by Molmil
270 A SynPspA rod after incubation with ATP
分子名称: Chloroplast membrane-associated 30 kD protein
著者Junglas, B, Hudina, E, Schoennenbeck, P, Ritter, I, Santiago-Schuebel, B, Huesgen, P, Sachse, C.
登録日2022-07-31
公開日2024-02-14
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Non-canonical ATPase activity drives PspA membrane constriction
To Be Published
8AKW
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BU of 8akw by Molmil
280 A SynPspA rod after incubation with ATP
分子名称: Chloroplast membrane-associated 30 kD protein
著者Junglas, B, Hudina, E, Schoennenbeck, P, Ritter, I, Santiago-Schuebel, B, Huesgen, P, Sachse, C.
登録日2022-07-31
公開日2024-02-14
実験手法ELECTRON MICROSCOPY (5.4 Å)
主引用文献Non-canonical ATPase activity drives PspA membrane constriction
To Be Published
4V55
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BU of 4v55 by Molmil
Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).
分子名称: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, 16S rRNA, 23S rRNA, ...
著者Borovinskaya, M.A, Pai, R.D, Zhang, W, Schuwirth, B.-S, Holton, J.M, Hirokawa, G, Kaji, H, Kaji, A, Cate, J.H.D.
登録日2007-06-17
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structural basis for aminoglycoside inhibition of bacterial ribosome recycling.
Nat.Struct.Mol.Biol., 14, 2007
8EBN
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BU of 8ebn by Molmil
Structure of KLHDC2-EloB/C tetrameric assembly
分子名称: Elongin-B, Elongin-C, Kelch domain-containing protein 2
著者Scott, D.C, Schulman, B.A.
登録日2022-08-31
公開日2023-02-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献E3 ligase autoinhibition by C-degron mimicry maintains C-degron substrate fidelity.
Mol.Cell, 83, 2023
5V4K
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BU of 5v4k by Molmil
Crystal structure of NEDD4 LIR-fused human LC3B_2-119
分子名称: GLYCEROL, Microtubule-associated proteins 1A/1B light chain 3B,Microtubule-associated proteins 1A/1B light chain 3B,Microtubule-associated proteins 1A/1B light chain 3B, SULFATE ION
著者Qiu, Y, Zheng, Y, Schulman, B.
登録日2017-03-09
公開日2017-05-17
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.099 Å)
主引用文献Insights into links between autophagy and the ubiquitin system from the structure of LC3B bound to the LIR motif from the E3 ligase NEDD4.
Protein Sci., 26, 2017
6P5W
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BU of 6p5w by Molmil
Structure of DCN1 bound to 3-methyl-N-((4S,5S)-3-methyl-6-oxo-1-phenyl-4-(p-tolyl)-4,5,6,7-tetrahydro-1H-pyrazolo[3,4-b]pyridin-5-yl)benzamide
分子名称: 3-methyl-N-[(4S,5S)-3-methyl-4-(4-methylphenyl)-6-oxo-1-phenyl-4,5,6,7-tetrahydro-1H-pyrazolo[3,4-b]pyridin-5-yl]benzamide, Lysozyme,DCN1-like protein 1 chimera
著者Guy, R.K, Kim, H.S, Hammill, J.T, Scott, D.C, Schulman, B.A.
登録日2019-05-31
公開日2019-09-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Discovery of Novel Pyrazolo-pyridone DCN1 Inhibitors Controlling Cullin Neddylation.
J.Med.Chem., 62, 2019
6WY6
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BU of 6wy6 by Molmil
Crystal structure of S. cerevisiae Atg8 in complex with Ede1 (1220-1247)
分子名称: Autophagy-related protein 8, EH domain-containing and endocytosis protein 1
著者Zheng, Y, Wilfling, F, Baumeister, W, Schulman, B.A.
登録日2020-05-12
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.773 Å)
主引用文献A Selective Autophagy Pathway for Phase-Separated Endocytic Protein Deposits.
Mol.Cell, 80, 2020
6NQT
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GalNac-T2 soaked with UDP-sugar
分子名称: MANGANESE (II) ION, Polypeptide N-acetylgalactosaminyltransferase 2, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{R},4~{R},5~{R},6~{R})-3-(hex-5-ynoylamino)-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl] hydrogen phosphate
著者Fernandez, D, Bertozzi, C.R, Schumann, B, Agbay, A.
登録日2019-01-21
公開日2020-01-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Bump-and-Hole Engineering Identifies Specific Substrates of Glycosyltransferases in Living Cells.
Mol.Cell, 78, 2020
7Q4Y
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human Gid4 bound to a Gly/N-peptide
分子名称: Glucose-induced degradation protein 4 homolog
著者Sherpa, D, Chrustowicz, J, Prabu, J.R, Schulman, B.A.
登録日2021-11-02
公開日2022-03-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Multifaceted N-Degron Recognition and Ubiquitylation by GID/CTLH E3 Ligases.
J.Mol.Biol., 434, 2022

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件を2024-06-26に公開中

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