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PDB: 45 results

7TC8
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Cryo-EM structure of methane monooxygenase hydroxylase (by graphene)
Descriptor: FE (III) ION, Methane monooxygenase component A alpha chain, Methane monooxygenase component A beta chain, ...
Authors:Cho, U.S, Kim, B.C.
Deposit date:2021-12-23
Release date:2023-01-25
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Batch Production of High-Quality Graphene Grids for Cryo-EM: Cryo-EM Structure of Methylococcus capsulatus Soluble Methane Monooxygenase Hydroxylase.
Acs Nano, 17, 2023
7TC7
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BU of 7tc7 by Molmil
Cryo-EM structure of methane monooxygenase hydroxylase (by quantifoil)
Descriptor: FE (III) ION, Methane monooxygenase component A alpha chain, Methane monooxygenase component A beta chain, ...
Authors:Cho, U.S, Kim, B.C.
Deposit date:2021-12-23
Release date:2023-01-25
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Batch Production of High-Quality Graphene Grids for Cryo-EM: Cryo-EM Structure of Methylococcus capsulatus Soluble Methane Monooxygenase Hydroxylase.
Acs Nano, 17, 2023
1YAX
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BU of 1yax by Molmil
Cystal structure Analysis of S.typhimurium PhoQ sensor domain with Calcium
Descriptor: CALCIUM ION, Virulence sensor protein phoQ, sensor domain
Authors:Cho, U.S, Xu, W.
Deposit date:2004-12-17
Release date:2005-12-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Metal bridges between the PhoQ sensor domain and the membrane regulate transmembrane signaling.
J.Mol.Biol., 356, 2006
3SQI
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BU of 3sqi by Molmil
DNA binding domain of Ndc10
Descriptor: DNA (5'-D(P*AP*AP*AP*TP*TP*TP*TP*AP*TP*AP*AP*AP*TP*TP*A)-3'), DNA (5'-D(P*TP*TP*AP*AP*TP*TP*TP*AP*TP*AP*AP*AP*AP*TP*T)-3'), KLLA0E03807p
Authors:Cho, U.S, Harrison, S.C.
Deposit date:2011-07-05
Release date:2011-12-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8245 Å)
Cite:Ndc10 is a platform for inner kinetochore assembly in budding yeast.
Nat.Struct.Mol.Biol., 19, 2011
3T79
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Ndc10: a platform for inner kinetochore assembly in budding yeast
Descriptor: DNA (5'-D(P*AP*AP*AP*AP*AP*TP*TP*TP*TP*AP*TP*AP*AP*AP*T)-3'), DNA (5'-D(P*AP*AP*AP*TP*TP*TP*TP*AP*TP*AP*AP*AP*TP*TP*A)-3'), DNA (5'-D(P*TP*AP*AP*TP*TP*TP*AP*TP*AP*AP*AP*AP*TP*T)-3'), ...
Authors:Cho, U.S, Harrison, S.C.
Deposit date:2011-07-29
Release date:2011-12-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.6113 Å)
Cite:Ndc10 is a platform for inner kinetochore assembly in budding yeast.
Nat.Struct.Mol.Biol., 19, 2011
2PF4
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BU of 2pf4 by Molmil
Crystal structure of the full-length simian virus 40 small t antigen complexed with the protein phosphatase 2A Aalpha subunit
Descriptor: Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform, Small T antigen, ZINC ION
Authors:Cho, U, Morrone, S, Xu, W.
Deposit date:2007-04-03
Release date:2007-08-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis of PP2A inhibition by small t antigen.
Plos Biol., 5, 2007
2YFV
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BU of 2yfv by Molmil
The heterotrimeric complex of Kluyveromyces lactis Scm3, Cse4 and H4
Descriptor: HISTONE H3-LIKE CENTROMERIC PROTEIN CSE4, HISTONE H4, IODIDE ION, ...
Authors:Cho, U.S, Harrison, S.C.
Deposit date:2011-04-08
Release date:2011-05-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Recognition of the Centromere-Specific Histone Cse4 by the Chaperone Scm3.
Proc.Natl.Acad.Sci.USA, 108, 2011
2YFW
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Heterotetramer structure of Kluyveromyces lactis Cse4,H4
Descriptor: HISTONE H3-LIKE CENTROMERIC PROTEIN CSE4, HISTONE H4
Authors:Cho, U.S, Harrison, S.C.
Deposit date:2011-04-08
Release date:2011-05-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Recognition of the Centromere-Specific Histone Cse4 by the Chaperone Scm3.
Proc.Natl.Acad.Sci.USA, 108, 2011
2IAE
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BU of 2iae by Molmil
Crystal structure of a protein phosphatase 2A (PP2A) holoenzyme.
Descriptor: MANGANESE (II) ION, Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform, Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform, ...
Authors:Cho, U.S, Xu, W.
Deposit date:2006-09-07
Release date:2006-12-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structure of a protein phosphatase 2A heterotrimeric holoenzyme.
Nature, 445, 2007
7SFZ
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BU of 7sfz by Molmil
Crystal structure of Mis18a-yippee domain
Descriptor: Protein Mis18-alpha, SULFATE ION, ZINC ION
Authors:Park, S.H, Cho, U.
Deposit date:2021-10-04
Release date:2022-10-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:Structural Basis for Mis18 Complex Assembly: Implications for Centromere Maintenance
To Be Published
4XYH
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BU of 4xyh by Molmil
Wild-type full length Mis16 in Schizosaccharomyces japonicus
Descriptor: Kinetochore protein Mis16
Authors:An, S, Kim, H, Cho, U.-S.
Deposit date:2015-02-02
Release date:2016-01-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mis16 Independently Recognizes Histone H4 and the CENP-ACnp1-Specific Chaperone Scm3sp.
J.Mol.Biol., 427, 2015
7SFY
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BU of 7sfy by Molmil
Crystal structure of human Mis18ab_cc
Descriptor: Protein Mis18-alpha, Protein Mis18-beta
Authors:Park, S.H, Cho, U.
Deposit date:2021-10-04
Release date:2023-04-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Mis18 Complex Assembly: Implications for Centromere Maintenance
To Be Published
6WH6
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BU of 6wh6 by Molmil
Crystal structure of human sulfide quinone oxidoreductase in complex with coenzyme Q (cyanide soaked)
Descriptor: CYANIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Sulfide:quinone oxidoreductase, ...
Authors:Banerjee, R, Cho, U.S, Moon, S.
Deposit date:2020-04-07
Release date:2021-04-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Dismantling and Rebuilding the Trisulfide Cofactor Demonstrates Its Essential Role in Human Sulfide Quinone Oxidoreductase.
J.Am.Chem.Soc., 142, 2020
5CUF
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BU of 5cuf by Molmil
X-ray crystal structure of SeMet human Sestrin2
Descriptor: Sestrin-2
Authors:Kim, H, An, S, Ro, S.-H, Lee, J.H, Cho, U.-S.
Deposit date:2015-07-24
Release date:2016-01-13
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Janus-faced Sestrin2 controls ROS and mTOR signalling through two separate functional domains.
Nat Commun, 6, 2015
4GAM
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BU of 4gam by Molmil
Complex structure of Methane monooxygenase hydroxylase and regulatory subunit
Descriptor: FE (III) ION, Methane monooxygenase component A alpha chain, Methane monooxygenase component A beta chain, ...
Authors:Lee, S.J, Lippard, S.J, Cho, U.-S.
Deposit date:2012-07-25
Release date:2013-02-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.902 Å)
Cite:Control of substrate access to the active site in methane monooxygenase.
Nature, 494, 2013
6NBA
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BU of 6nba by Molmil
Crystal structure of Human Cystathionine gamma lyase with S-3-Carboxpropyl-L-Cysteine
Descriptor: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, Cystathionine gamma-lyase
Authors:Kim, H, Yadav, P.K, Banerjee, R, Cho, U.-S.
Deposit date:2018-12-06
Release date:2019-06-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.495 Å)
Cite:S-3-Carboxypropyl-l-cysteine specifically inhibits cystathionine gamma-lyase-dependent hydrogen sulfide synthesis.
J.Biol.Chem., 294, 2019
6D7K
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BU of 6d7k by Molmil
Complex structure of Methane monooxygenase hydroxylase in complex with inhibitory subunit
Descriptor: FE (III) ION, FORMIC ACID, HEXANE-1,6-DIOL, ...
Authors:Kim, H, Lee, S.J, Cho, U.-S.
Deposit date:2018-04-24
Release date:2019-06-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:MMOD-induced structural changes of hydroxylase in soluble methane monooxygenase.
Sci Adv, 5, 2019
7MBM
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BU of 7mbm by Molmil
Cryo-EM structure of MLL1-NCP (H3K4M) complex, mode01
Descriptor: DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Park, S.H, Ayoub, A, Lee, Y.T, Dou, Y, Cho, U.
Deposit date:2021-04-01
Release date:2021-12-29
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY
Cite:Regulation of MLL1 Methyltransferase Activity in Two Distinct Nucleosome Binding Modes.
Biochemistry, 61, 2022
7MBN
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BU of 7mbn by Molmil
Cryo-EM structure of MLL1-NCP (H3K4M) complex, mode02
Descriptor: DNA (146-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Park, S.H, Ayoub, A, Lee, Y.T, Dou, Y, Cho, U.
Deposit date:2021-04-01
Release date:2021-12-29
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY
Cite:Regulation of MLL1 Methyltransferase Activity in Two Distinct Nucleosome Binding Modes.
Biochemistry, 61, 2022
7U5V
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BU of 7u5v by Molmil
Crystal structure of the Mixed Lineage Leukaemia (MLL1) SET Domain with the cofactor product S-Adenosylhomocysteine and Borealin peptide
Descriptor: Borealin, Histone-lysine N-methyltransferase 2A, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:An, S, Cho, U.S, Oh, H, Sha, L, Xu, J, Kim, S, Yang, W, An, W, Dou, Y.
Deposit date:2022-03-02
Release date:2023-09-27
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Non-canonical MLL1 activity regulates centromeric phase separation and genome stability.
Nat.Cell Biol., 25, 2023
6W5N
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BU of 6w5n by Molmil
Cryo-EM structure of MLL1 in complex with RbBP5, WDR5, SET1, and ASH2L bound to the nucleosome (Class05)
Descriptor: DNA (147-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Park, S.H, Lee, Y.T, Ayoub, A, Dou, Y, Cho, U.
Deposit date:2020-03-13
Release date:2021-03-31
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Mechanism for DPY30 and ASH2L intrinsically disordered regions to modulate the MLL/SET1 activity on chromatin.
Nat Commun, 12, 2021
6O2D
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BU of 6o2d by Molmil
Schizosaccharomyces pombe Cnp3 Cupin Domain
Descriptor: Inner kinetochore subunit cnp3
Authors:Chik, J.K, Cho, U.S.
Deposit date:2019-02-22
Release date:2019-08-21
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Structures of CENP-C cupin domains at regional centromeres reveal unique patterns of dimerization and recruitment functions for the inner pocket.
J.Biol.Chem., 294, 2019
6O2K
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Drosophila melanogaster CENP-C cupin domain
Descriptor: Centromeric protein-C, isoform A
Authors:Chik, J.K, Cho, U.S.
Deposit date:2019-02-23
Release date:2019-08-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structures of CENP-C cupin domains at regional centromeres reveal unique patterns of dimerization and recruitment functions for the inner pocket.
J.Biol.Chem., 294, 2019
6W5I
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BU of 6w5i by Molmil
Cryo-EM structure of MLL1 in complex with RbBP5, WDR5, SET1, and ASH2L bound to the nucleosome (Class01)
Descriptor: DNA (147-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Park, S.H, Lee, Y.T, Ayoub, A, Dou, Y, Cho, U.
Deposit date:2020-03-13
Release date:2021-03-31
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Mechanism for DPY30 and ASH2L intrinsically disordered regions to modulate the MLL/SET1 activity on chromatin.
Nat Commun, 12, 2021
6W5M
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BU of 6w5m by Molmil
Cryo-EM structure of MLL1 in complex with RbBP5, WDR5, SET1, and ASH2L bound to the nucleosome (Class02)
Descriptor: DNA (147-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Park, S.H, Lee, Y.T, Ayoub, A, Dou, Y, Cho, U.
Deposit date:2020-03-13
Release date:2021-03-31
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Mechanism for DPY30 and ASH2L intrinsically disordered regions to modulate the MLL/SET1 activity on chromatin.
Nat Commun, 12, 2021

 

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PDB entries from 2024-06-12

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