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PDB: 218 件

7OSR
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Structure and folding of a 600-million-year-old nuclear coactivator binding domain suggest conservation of dynamic properties
分子名称: Nuclear co-activator binding domain
著者Chi, C.
登録日2021-06-09
公開日2022-04-20
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献The dynamic properties of a nuclear coactivator binding domain are evolutionarily conserved.
Commun Biol, 5, 2022
7OSW
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Structure and folding of a 600-million-year-old nuclear coactivator binding domain suggest conservation of dynamic properties
分子名称: NCBD
著者Chi, C.
登録日2021-06-09
公開日2022-04-20
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献The dynamic properties of a nuclear coactivator binding domain are evolutionarily conserved.
Commun Biol, 5, 2022
1L3H
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NMR structure of P41icf, a potent inhibitor of human cathepsin L
分子名称: MHC CLASS II-ASSOCIATED P41 INVARIANT CHAIN FRAGMENT (P41icf)
著者Chiva, C, Barthe, P, Codina, A, Giralt, E.
登録日2002-02-27
公開日2003-03-04
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Synthesis and NMR structure of P41ICF, a potent inhibitor of human cathepsin L
J.Am.Chem.Soc., 125, 2003
4UMG
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Crystal structure of the Lin-41 filamin domain
分子名称: PROTEIN LIN-41
著者Tocchini, C, Keusch, J.J, Miller, S.B, Finger, S, Gut, H, Stadler, M, Ciosk, R.
登録日2014-05-16
公開日2014-10-01
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献The Trim-Nhl Protein Lin-41 Controls the Onset of Developmental Plasticity in Caenorhabditis Elegans.
Plos Genet., 10, 2014
1YKR
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Crystal structure of cdk2 with an aminoimidazo pyridine inhibitor
分子名称: 4-{[6-(2,6-DICHLOROBENZOYL)IMIDAZO[1,2-A]PYRIDIN-2-YL]AMINO}BENZENESULFONAMIDE, Cell division protein kinase 2
著者Hamdouchi, C, Zhong, B, Mendoza, J, Jaramillo, C, Zhang, F, Brooks, H.B.
登録日2005-01-18
公開日2006-01-24
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-based design of a new class of highly selective aminoimidazo[1,2-a]pyridine-based inhibitors of cyclin dependent kinases
Bioorg.Med.Chem.Lett., 15, 2005
3MYW
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The Bowman-Birk type inhibitor from mung bean in ternary complex with porcine trypsin
分子名称: Bowman-Birk type trypsin inhibitor, CALCIUM ION, Trypsin
著者Engh, R.A, Bode, W, Huber, R, Lin, G, Chi, C.
登録日2010-05-11
公開日2010-12-29
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The 0.25-nm X-ray structure of the Bowman-Birk-type inhibitor from mung bean in ternary complex with porcine trypsin.
Eur.J.Biochem., 212, 1993
2JQC
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A L-amino acid mutant of a D-amino acid containing conopeptide
分子名称: L-mr12
著者Huang, F, Du, W, Han, Y, Wang, C, Chi, C.
登録日2007-05-31
公開日2008-04-15
最終更新日2023-12-20
実験手法SOLUTION NMR
主引用文献Purification and structural characterization of a d-amino acid-containing conopeptide, conomarphin, from Conus marmoreus
Febs J., 275, 2008
4V5T
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X-ray structure of the Grapevine Fanleaf virus
分子名称: COAT PROTEIN
著者Schellenberger, P, Sauter, C, Lorber, B, Bron, P, Trapani, S, Bergdoll, M, Marmonier, A, Schmitt-Keichinger, C, Lemaire, O, Demangeat, G, Ritzenthaler, C.
登録日2011-02-01
公開日2014-07-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural Insights Into Viral Determinants of Nematode Mediated Grapevine Fanleaf Virus Transmission.
Plos Pathog., 7, 2011
7QCX
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Two-state liquid NMR Structure of a PDZ2 Domain from hPTP1E, apo form
分子名称: Tyrosine-protein phosphatase non-receptor type 13
著者Ashkinadze, D, Kadavath, H, Chi, C, Friedmann, M, Strotz, D, Kumari, P, Minges, M, Cadalbert, R, Koenigl, S, Guentert, P, Voegeli, B, Riek, R.
登録日2021-11-25
公開日2022-09-07
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Atomic resolution protein allostery from the multi-state structure of a PDZ domain.
Nat Commun, 13, 2022
7QCY
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Two-state liquid NMR Structure of a PDZ2 Domain from hPTP1E, complexed with RA-GEF2 peptide
分子名称: Tyrosine-protein phosphatase non-receptor type 13
著者Ashkinadze, D, Kadavath, H, Chi, C, Friedmann, M, Strotz, D, Kumari, P, Minges, M, Cadalbert, R, Koenigl, S, Guentert, P, Voegeli, B, Riek, R.
登録日2021-11-25
公開日2022-09-07
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Atomic resolution protein allostery from the multi-state structure of a PDZ domain.
Nat Commun, 13, 2022
2JQB
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Solution structure of a novel D-amiNo acid containing conopeptide, conomarphin at pH 5
分子名称: Conomarphin
著者Huang, F, Du, W, Han, Y, Wang, C, Chi, C.
登録日2007-05-31
公開日2008-06-03
最終更新日2023-12-20
実験手法SOLUTION NMR
主引用文献Solution structure of a novel D-amiNo acid containing conopeptide, conomarphin at pH 5
To be Published
1SW8
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Solution structure of the N-terminal domain of Human N60D calmodulin refined with paramagnetism based strategy
分子名称: CALCIUM ION, Calmodulin
著者Bertini, I, Del Bianco, C, Gelis, I, Katsaros, N, Luchinat, C, Parigi, G, Peana, M, Provenzani, A, Zoroddu, M.A, Structural Proteomics in Europe (SPINE)
登録日2004-03-30
公開日2004-04-06
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Experimentally exploring the conformational space sampled by domain reorientation in calmodulin
Proc.Natl.Acad.Sci.USA, 101, 2004
1SBW
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BU of 1sbw by Molmil
CRYSTAL STRUCTURE OF MUNG BEAN INHIBITOR LYSINE ACTIVE FRAGMENT COMPLEX WITH BOVINE BETA-TRYPSIN AT 1.8A RESOLUTION
分子名称: CALCIUM ION, PROTEIN (BETA-TRYPSIN), PROTEIN (MUNG BEAN INHIBITOR LYSIN ACTIVE FRAGMENT), ...
著者Huang, Q, Zhu, Y, Chi, C, Tang, Y.
登録日1999-04-29
公開日1999-05-06
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of mung bean inhibitor lysine active fragment complex with bovine beta-trypsin at 1.8A resolution.
J.Biomol.Struct.Dyn., 16, 1999
1S05
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NMR-validated structural model for oxidized R.palustris cytochrome c556
分子名称: Cytochrome c-556, HEME C
著者Bertini, I, Faraone-Mennella, J, Gray, H.B, Luchinat, C, Parigi, G, Winkler, J.R.
登録日2003-12-30
公開日2004-01-20
最終更新日2021-03-03
実験手法SOLUTION NMR
主引用文献NMR-validated structural model for oxidized Rhodopseudomonas palustris cytochrome c(556).
J.Biol.Inorg.Chem., 9, 2004
5J8S
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BU of 5j8s by Molmil
Iron-free state of Rana Catesbeiana H' ferritin variant E57A/E136A/D140A
分子名称: CHLORIDE ION, Ferritin, middle subunit, ...
著者Pozzi, C, Di Pisa, F, Mangani, S, Bernacchioni, C, Turano, P.
登録日2016-04-08
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Ferroxidase Activity in Eukaryotic Ferritin is Controlled by Accessory-Iron-Binding Sites in the Catalytic Cavity.
Chemistry, 22, 2016
5J9V
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Ten minutes iron loaded Rana Catesbeiana H' ferritin variant E57A/E136A/D140A
分子名称: CHLORIDE ION, FE (II) ION, Ferritin, ...
著者Pozzi, C, Di Pisa, F, Mangani, S, Bernacchioni, C, Turano, P.
登録日2016-04-11
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Ferroxidase Activity in Eukaryotic Ferritin is Controlled by Accessory-Iron-Binding Sites in the Catalytic Cavity.
Chemistry, 22, 2016
5JAC
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Sixty minutes iron loaded Rana Catesbeiana H' ferritin variant E57A/E136A/D140A
分子名称: CHLORIDE ION, FE (II) ION, Ferritin, ...
著者Pozzi, C, Di Pisa, F, Mangani, S, Bernacchioni, C, Turano, P.
登録日2016-04-12
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Ferroxidase Activity in Eukaryotic Ferritin is Controlled by Accessory-Iron-Binding Sites in the Catalytic Cavity.
Chemistry, 22, 2016
4GUY
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BU of 4guy by Molmil
Human MMP12 catalytic domain in complex with*N*-Hydroxy-2-(2-(4-methoxyphenyl)ethylsulfonamido)acetamide
分子名称: CALCIUM ION, Macrophage metalloelastase, N-hydroxy-N~2~-{[2-(4-methoxyphenyl)ethyl]sulfonyl}glycinamide, ...
著者Calderone, V, Fragai, M, Luchinat, C, Massaro, A, Mordini, A, Mori, M.
登録日2012-08-30
公開日2012-09-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Contribution of free energy of solvation to ligand affinity in new potent MMPs inhibitors.
To be Published
1G9I
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CRYSTAL STRUCTURE OF BETA-TRYSIN COMPLEX IN CYCLOHEXANE
分子名称: BOWMAN-BIRK TYPE TRYPSIN INHIBITOR, CALCIUM ION, SULFATE ION, ...
著者Zhu, G, Huang, Q, Zhu, Y, Li, Y, Chi, C, Tang, Y.
登録日2000-11-24
公開日2000-12-06
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-Ray study on an artificial mung bean inhibitor complex with bovine beta-trypsin in neat cyclohexane.
Biochim.Biophys.Acta, 1546, 2001
7C0N
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BU of 7c0n by Molmil
Crystal structure of a self-assembling galactosylated peptide homodimer
分子名称: SULFATE ION, Self-assembling galactosylated tyrosine-rich peptide, beta-D-galactopyranose
著者He, C, Wu, S, Chi, C, Zhang, W, Ma, M, Lai, L, Dong, S.
登録日2020-05-01
公開日2020-10-07
最終更新日2020-10-21
実験手法X-RAY DIFFRACTION (1.552 Å)
主引用文献Glycopeptide Self-Assembly Modulated by Glycan Stereochemistry through Glycan-Aromatic Interactions.
J.Am.Chem.Soc., 142, 2020
8XZ2
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The structural model of a homodimeric D-Ala-D-Ala metallopeptidase, VanX, from vancomycin-resistant bacteria
分子名称: D-alanyl-D-alanine dipeptidase
著者Konuma, T, Takai, T, Tsuchiya, C, Nishida, M, Hashiba, M, Yamada, Y, Shirai, H, Motoda, Y, Nagadoi, A, Chikaishi, E, Akagi, K, Akashi, S, Yamazaki, T, Akutsu, H, Oe, A, Ikegami, T.
登録日2024-01-20
公開日2024-05-22
実験手法SOLUTION NMR
主引用文献Analysis of the homodimeric structure of a D-Ala-D-Ala metallopeptidase, VanX, from vancomycin-resistant bacteria.
Protein Sci., 33, 2024
1CLF
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CLOSTRIDIUM PASTEURIANUM FERREDOXIN
分子名称: FERREDOXIN, IRON/SULFUR CLUSTER
著者Bertini, I, Donaire, A, Feinberg, B.A, Luchinat, C, Piccioli, M, Yuan, H.
登録日1995-06-21
公開日1996-01-29
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the oxidized 2[4Fe-4S] ferredoxin from Clostridium pasteurianum.
Eur.J.Biochem., 232, 1995
3DSH
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BU of 3dsh by Molmil
Crystal structure of dimeric interferon regulatory factor 5 (IRF-5) transactivation domain
分子名称: Interferon regulatory factor 5
著者Chen, W, Lam, S.S, Srinath, H, Jiang, Z, Correia, J.J, Schiffer, C, Fitzgerald, K.A, Lin, K, Royer Jr, W.E.
登録日2008-07-12
公開日2008-10-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Insights into interferon regulatory factor activation from the crystal structure of dimeric IRF5.
Nat.Struct.Mol.Biol., 15, 2008
1CKU
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AB INITIO SOLUTION AND REFINEMENT OF TWO HIGH POTENTIAL IRON PROTEIN STRUCTURES AT ATOMIC RESOLUTION
分子名称: IRON/SULFUR CLUSTER, PROTEIN (HIPIP)
著者Parisini, E, Capozzi, F, Lubini, P, Lamzin, V, Luchinat, C, Sheldrick, G.M.
登録日1999-04-24
公開日1999-05-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Ab initio solution and refinement of two high-potential iron protein structures at atomic resolution.
Acta Crystallogr.,Sect.D, 55, 1999
5FOJ
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Cryo electron microscopy structure of Grapevine Fanleaf Virus complex with Nanobody
分子名称: Nanobody, RNA2 polyprotein
著者Orlov, I, Hemmer, C, Ackerer, L, Lorber, B, Ghannam, A, Poignavent, V, Hleibieh, K, Sauter, C, Schmitt-Keichinger, C, Belval, L, Hily, J.M, Marmonier, A, Komar, V, Gersch, S, Schellenberger, P, Bron, P, Vigne, E, Muyldermans, S, Lemaire, O, Demangeat, G, Ritzenthaler, C, Klaholz, B.P.
登録日2015-11-22
公開日2016-01-20
最終更新日2021-08-11
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural basis of nanobody recognition of grapevine fanleaf virus and of virus resistance loss.
Proc.Natl.Acad.Sci.USA, 2020

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