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PDB: 1330 results

8SXO
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Crystal Structure of SARS-CoV-2 Main Protease (Mpro) H164I Mutant
Descriptor: 3C-like proteinase nsp5
Authors:Kohaal, N, Lewandowski, E.M, Wang, J, Chen, Y.
Deposit date:2023-05-23
Release date:2023-06-14
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Crystal Structure of SARS-CoV-2 Main Protease (Mpro) H164I Mutant
To Be Published
7F3X
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BU of 7f3x by Molmil
Lysophospholipid acyltransferase LPCAT3 in complex with lysophosphatidylcholine
Descriptor: LPCAT3, [2-((1-OXODODECANOXY-(2-HYDROXY-3-PROPANYL))-PHOSPHONATE-OXY)-ETHYL]-TRIMETHYLAMMONIUM
Authors:Zhang, Q, Yao, D, Rao, B, Li, S, Jian, L, Chen, Y, Hu, K, Xia, Y, Shen, Y, Cao, Y.
Deposit date:2021-06-17
Release date:2021-12-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:The structural basis for the phospholipid remodeling by lysophosphatidylcholine acyltransferase 3.
Nat Commun, 12, 2021
7EWT
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BU of 7ewt by Molmil
The crystal structure of Lysophospholipid acyltransferase LPCAT3 (MOBAT5) in its monomeric and apo form
Descriptor: Lysophospholipid acyltransferase 5
Authors:Zhang, Q, Yao, D, Rao, B, Li, S, Jian, L, Chen, Y, Hu, K, Xia, Y, Cao, Y.
Deposit date:2021-05-26
Release date:2021-12-01
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:The structural basis for the phospholipid remodeling by lysophosphatidylcholine acyltransferase 3.
Nat Commun, 12, 2021
7F40
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Lysophospholipid acyltransferase LPCAT3 in a complex with Arachidonoyl-CoA
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, LPCAT3, S-[2-[3-[[(2R)-4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyl] (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenethioate
Authors:Zhang, Q, Yao, D, Rao, B, Li, S, Jian, L, Chen, Y, Hu, K, Xia, Y, Shen, Y, Cao, Y.
Deposit date:2021-06-17
Release date:2021-12-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:The structural basis for the phospholipid remodeling by lysophosphatidylcholine acyltransferase 3.
Nat Commun, 12, 2021
8F93
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WDR5 covalently modified at Y228 by (R)-2-SF
Descriptor: 3-ethynyl-5-{[(3R)-4-{1-[(2-methoxyphenyl)methyl]-1H-benzimidazole-5-carbonyl}-3-methylpiperazin-1-yl]methyl}benzene-1-sulfonyl fluoride, CHLORIDE ION, GLYCEROL, ...
Authors:Taunton, J, Craven, G.B, Chen, Y.
Deposit date:2022-11-23
Release date:2023-05-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Direct mapping of ligandable tyrosines and lysines in cells with chiral sulfonyl fluoride probes.
Nat.Chem., 15, 2023
8U4Y
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BU of 8u4y by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) L50F Mutant
Descriptor: 3C-like proteinase nsp5
Authors:Kohaal, N, Lewandowski, E.M, Wang, J, Chen, Y.
Deposit date:2023-09-11
Release date:2024-10-09
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal Structure of SARS-CoV-2 Main Protease (Mpro) L50F Mutant
To Be Published
5XP7
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BU of 5xp7 by Molmil
C-Src in complex with ATP-CHCl
Descriptor: GLYCEROL, MAGNESIUM ION, Proto-oncogene tyrosine-protein kinase Src, ...
Authors:Guo, M, Dai, S, Duan, Y, Chen, L, Chen, Y.
Deposit date:2017-06-01
Release date:2017-09-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.012 Å)
Cite:Remarkably Stereospecific Utilization of ATP alpha , beta-Halomethylene Analogues by Protein Kinases.
J. Am. Chem. Soc., 139, 2017
5YRP
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BU of 5yrp by Molmil
Crystal structure of the EAL domain of Mycobacterium smegmatis DcpA
Descriptor: MAGNESIUM ION, Sensory box/response regulator
Authors:Chen, H.J, li, N, Luo, Y, Jiang, Y.L, Zhou, C.Z, Chen, Y, Li, Q.
Deposit date:2017-11-09
Release date:2018-05-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:The GDP-switched GAF domain of DcpA modulates the concerted synthesis/hydrolysis of c-di-GMP inMycobacterium smegmatis.
Biochem. J., 475, 2018
5XP5
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C-Src in complex with ATP-Chf
Descriptor: MAGNESIUM ION, Proto-oncogene tyrosine-protein kinase Src, [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-[(S)-fluoranyl-[oxidanyl(phosphonooxy)phosphoryl]methyl]phosphinic acid
Authors:Duan, Y, Guo, M, Dai, S, Chen, L, Chen, Y.
Deposit date:2017-06-01
Release date:2018-02-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Remarkably Stereospecific Utilization of ATP alpha , beta-Halomethylene Analogues by Protein Kinases.
J. Am. Chem. Soc., 139, 2017
2LVQ
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gp78CUE domain bound to the proximal ubiquitin of K48-linked diubiquitin
Descriptor: E3 ubiquitin-protein ligase AMFR, Ubiquitin
Authors:Liu, S, Chen, Y, Huang, T, Tarasov, S.G, King, A, Li, J, Weissman, A.M, Byrd, R.A, Das, R.
Deposit date:2012-07-09
Release date:2012-11-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains.
Structure, 20, 2012
6KMJ
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BU of 6kmj by Molmil
Crystal structure of Sth1 bromodomain in complex with H3K14Ac
Descriptor: GLYCEROL, Histone H3, Nuclear protein STH1/NPS1
Authors:Chen, G, Li, W, Yan, F, Wang, D, Chen, Y.
Deposit date:2019-07-31
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Structural Basis for Specific Recognition of H3K14 Acetylation by Sth1 in the RSC Chromatin Remodeling Complex.
Structure, 28, 2020
6KMB
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Crystal structure of Sth1 bromodomain
Descriptor: GLYCEROL, Nuclear protein STH1/NPS1
Authors:Chen, G, Li, W, Yan, F, Wang, D, Chen, Y.
Deposit date:2019-07-31
Release date:2019-10-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Structural Basis for Specific Recognition of H3K14 Acetylation by Sth1 in the RSC Chromatin Remodeling Complex.
Structure, 28, 2020
6ACS
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BU of 6acs by Molmil
poly-cis-prenyltransferase
Descriptor: CITRIC ACID, Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific), GLYCEROL, ...
Authors:Ko, T.-P, Chen, Y.
Deposit date:2018-07-27
Release date:2018-12-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structure of undecaprenyl pyrophosphate synthase from Acinetobacter baumannii
Acta Crystallogr F Struct Biol Commun, 74, 2018
2N7X
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BU of 2n7x by Molmil
Solution structure of microRNA 20b pre-element
Descriptor: RNA (5'-R(*GP*GP*UP*AP*GP*UP*UP*UP*UP*GP*GP*CP*AP*UP*GP*AP*CP*UP*CP*UP*AP*CP*C)-3')
Authors:Yang, F, Chen, Y, Varani, G.
Deposit date:2015-09-25
Release date:2016-04-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Rbfox proteins regulate microRNA biogenesis by sequence-specific binding to their precursors and target downstream Dicer.
Nucleic Acids Res., 44, 2016
2N82
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BU of 2n82 by Molmil
solution structure of the complex of microRNA 20b pre-element with Rbfox RRM
Descriptor: RNA (5'-R(*GP*GP*UP*AP*GP*UP*UP*UP*UP*GP*GP*CP*AP*UP*GP*AP*CP*UP*CP*UP*AP*CP*C)-3'), RNA binding protein fox-1 homolog 1
Authors:Yang, F, Chen, Y, Varani, G.
Deposit date:2015-09-30
Release date:2016-04-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Rbfox proteins regulate microRNA biogenesis by sequence-specific binding to their precursors and target downstream Dicer.
Nucleic Acids Res., 44, 2016
5YI6
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BU of 5yi6 by Molmil
CRISPR associated protein Cas6
Descriptor: CRISPR-associated endoribonuclease Cas6 1, GLYCEROL, PHOSPHATE ION
Authors:Ko, T.P, Hsieh, T.J, Chen, Y.
Deposit date:2017-10-03
Release date:2018-09-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.852 Å)
Cite:Expression, Purification, Crystallization, and X-ray Structural Analysis of CRISPR-Associated Protein Cas6 from Methanocaldococcus jannaschii
Crystals, 7, 2018
7D68
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BU of 7d68 by Molmil
Cryo-EM structure of the human glucagon-like peptide-2 receptor-Gs protein complex
Descriptor: Glucagon-like peptide 2 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Sun, W, Chen, L, Zhou, Q, Zhao, L, Zhang, H, Cong, Z, Shen, D, Zhao, F, Zhou, F, Cai, X, Chen, Y, Zhou, Y, Gadgaard, S, van der Velden, W.J, Zhao, S, Jiang, Y, Rosenkilde, M.M, Yang, D, Xu, H.E, Zhang, Y, Wang, M.
Deposit date:2020-09-29
Release date:2020-12-16
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A unique hormonal recognition feature of the human glucagon-like peptide-2 receptor.
Cell Res., 30, 2020
3OXR
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BU of 3oxr by Molmil
Crystal Structure of HLA A*02:06 Bound to HBV Core 18-27
Descriptor: 10mer peptide from Pre-core-protein, Beta-2-microglobulin, MHC class I antigen
Authors:Liu, J, Chen, Y, Lai, L, Ren, E.
Deposit date:2010-09-21
Release date:2011-05-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights into the binding of hepatitis B virus core peptide to HLA-A2 alleles: Towards designing better vaccines.
Eur.J.Immunol., 41, 2011
3OXS
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BU of 3oxs by Molmil
Crystal Structure of HLA A*02:07 Bound to HBV Core 18-27
Descriptor: 10mer peptide from Pre-core-protein, Beta-2-microglobulin, MHC class I antigen
Authors:Liu, J, Chen, Y, Lai, L, Ren, E.
Deposit date:2010-09-22
Release date:2011-05-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural insights into the binding of hepatitis B virus core peptide to HLA-A2 alleles: Towards designing better vaccines.
Eur.J.Immunol., 41, 2011
3OX8
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BU of 3ox8 by Molmil
Crystal Structure of HLA A*02:03 Bound to HBV Core 18-27
Descriptor: 10mer peptide from Pre-core-protein, Beta-2-microglobulin, MHC class I antigen
Authors:Liu, J, Chen, Y, Lai, L, Ren, E.
Deposit date:2010-09-21
Release date:2011-05-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structural insights into the binding of hepatitis B virus core peptide to HLA-A2 alleles: Towards designing better vaccines.
Eur.J.Immunol., 41, 2011
6BT6
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BU of 6bt6 by Molmil
CTX-M-14 S237A Beta-Lactamase in Complex with a Non-Covalent Tetrazole Inhibitor
Descriptor: Beta-lactamase, N-[3-(2H-tetrazol-5-yl)phenyl]-6-(trifluoromethyl)-1H-benzimidazole-4-carboxamide
Authors:Pemberton, O.A, Chen, Y.
Deposit date:2017-12-05
Release date:2018-06-13
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Antibacterial Spectrum of a Tetrazole-Based Reversible Inhibitor of Serine beta-Lactamases.
Antimicrob. Agents Chemother., 62, 2018
6LQZ
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BU of 6lqz by Molmil
Solution structure of Taf14ET-Sth1EBMC
Descriptor: Nuclear protein STH1/NPS1, Transcription initiation factor TFIID subunit 14
Authors:Wu, B, Chen, G, Chen, Y.
Deposit date:2020-01-15
Release date:2020-08-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Taf14 recognizes a common motif in transcriptional machineries and facilitates their clustering by phase separation.
Nat Commun, 11, 2020
2PX9
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The intrinsic affinity between E2 and the Cys domain of E1 in Ubiquitin-like modifications
Descriptor: SUMO-activating enzyme subunit 2, SUMO-conjugating enzyme UBC9
Authors:Wang, J.H, Hu, W.D, Cai, S, Lee, B, Song, J, Chen, Y.
Deposit date:2007-05-14
Release date:2007-07-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The intrinsic affinity between E2 and the Cys domain of E1 in ubiquitin-like modifications.
Mol.Cell, 27, 2007
6D1B
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BU of 6d1b by Molmil
Crystal structure of NDM-1 complexed with compound 2
Descriptor: ACETATE ION, Metallo-beta-lactamase type 2, ZINC ION, ...
Authors:Pemberton, O.A, Chen, Y.
Deposit date:2018-04-11
Release date:2019-04-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases.
J.Med.Chem., 62, 2019
6D1H
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BU of 6d1h by Molmil
Crystal structure of NDM-1 complexed with compound 11
Descriptor: ACETATE ION, Metallo-beta-lactamase type 2, ZINC ION, ...
Authors:Pemberton, O.A, Chen, Y.
Deposit date:2018-04-11
Release date:2019-04-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases.
J.Med.Chem., 62, 2019

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