Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 140 results

4KWD
DownloadVisualize
BU of 4kwd by Molmil
Crystal structure of Aspergillus terreus aristolochene synthase complexed with (1R,8R,9aS)-1,9a-dimethyl-8-(prop-1-en-2-yl)decahydroquinolizin-5-ium
Descriptor: (1R,5R,8R,9aS)-1,9a-dimethyl-8-(prop-1-en-2-yl)octahydro-2H-quinolizinium, Aristolochene synthase, GLYCEROL, ...
Authors:Chen, M, Al-lami, N, Janvier, M, D'Antonio, E.L, Faraldos, J.A, Cane, D.E, Allemann, R.K, Christianson, D.W.
Deposit date:2013-05-23
Release date:2013-08-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.857 Å)
Cite:Mechanistic insights from the binding of substrate and carbocation intermediate analogues to aristolochene synthase.
Biochemistry, 52, 2013
5X6C
DownloadVisualize
BU of 5x6c by Molmil
Crystal structure of SepRS-SepCysE from Methanocaldococcus jannaschii
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, O-phosphoserine--tRNA(Cys) ligase, SULFATE ION, ...
Authors:Chen, M, Kato, K, Yao, M.
Deposit date:2017-02-21
Release date:2017-12-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.101 Å)
Cite:Structural basis for tRNA-dependent cysteine biosynthesis
Nat Commun, 8, 2017
5X6B
DownloadVisualize
BU of 5x6b by Molmil
Crystal structure of SepCysE-SepCysS in complex with tRNACys from Methanocaldococcus jannaschii
Descriptor: O-phospho-L-seryl-tRNA:Cys-tRNA synthase, Uncharacterized protein MJ1481, tRNACys
Authors:Chen, M, Kato, K, Yao, M.
Deposit date:2017-02-21
Release date:2017-12-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.596 Å)
Cite:Structural basis for tRNA-dependent cysteine biosynthesis
Nat Commun, 8, 2017
5IMP
DownloadVisualize
BU of 5imp by Molmil
Crystal structure of N299A Aspergillus terreus aristolochene synthase complexed with (1S,8S,9aR)-1,9a-dimethyl-8-(prop-1-en-2-yl)decahydroquinolizin-5-ium
Descriptor: (1S,5S,8S,9aR)-1,9a-dimethyl-8-(prop-1-en-2-yl)octahydro-2H-quinolizinium, Aristolochene synthase, GLYCEROL, ...
Authors:Chen, M, Christianson, D.W.
Deposit date:2016-03-06
Release date:2016-05-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.038 Å)
Cite:Probing the Role of Active Site Water in the Sesquiterpene Cyclization Reaction Catalyzed by Aristolochene Synthase.
Biochemistry, 55, 2016
5IMI
DownloadVisualize
BU of 5imi by Molmil
Crystal structure of S303A Aspergillus terreus aristolochene synthase complexed with (1S,8S,9aR)-1,9a-dimethyl-8-(prop-1-en-2-yl)decahydroquinolizin-5-ium
Descriptor: (1S,5S,8S,9aR)-1,9a-dimethyl-8-(prop-1-en-2-yl)octahydro-2H-quinolizinium, Aristolochene synthase, GLYCEROL, ...
Authors:Chen, M, Christianson, D.W.
Deposit date:2016-03-06
Release date:2016-05-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.462 Å)
Cite:Probing the Role of Active Site Water in the Sesquiterpene Cyclization Reaction Catalyzed by Aristolochene Synthase.
Biochemistry, 55, 2016
5IN8
DownloadVisualize
BU of 5in8 by Molmil
Crystal structure of Q151H Aspergillus terreus aristolochene synthase
Descriptor: Aristolochene synthase, GLYCEROL, MAGNESIUM ION, ...
Authors:Chen, M, Christianson, D.W.
Deposit date:2016-03-07
Release date:2016-05-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Probing the Role of Active Site Water in the Sesquiterpene Cyclization Reaction Catalyzed by Aristolochene Synthase.
Biochemistry, 55, 2016
4JAY
DownloadVisualize
BU of 4jay by Molmil
Crystal structure of P. aeruginosa MurB in complex with NADP+
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Chen, M.W, Lohkamp, B, Schnell, R, Lescar, J, Schneider, G.
Deposit date:2013-02-19
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Substrate Channel Flexibility in Pseudomonas aeruginosa MurB Accommodates Two Distinct Substrates.
Plos One, 8, 2013
5ERN
DownloadVisualize
BU of 5ern by Molmil
Crystal structure of elongation domain of Phomopsis amygdali fusicoccadiene synthase
Descriptor: Fusicoccadiene synthase
Authors:Chen, M, Christianson, D.W.
Deposit date:2015-11-14
Release date:2016-01-20
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.434 Å)
Cite:Structure and Function of Fusicoccadiene Synthase, a Hexameric Bifunctional Diterpene Synthase.
Acs Chem.Biol., 11, 2016
7C31
DownloadVisualize
BU of 7c31 by Molmil
Crystal structure of the grapevine defensin VvK1
Descriptor: Knot1 domain-containing protein
Authors:Chen, M.W, Chang, S.C, Chandy, K.G, Luo, D.
Deposit date:2020-05-10
Release date:2020-09-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Modulation of Lymphocyte Potassium Channel KV1.3 by Membrane-Penetrating, Joint-Targeting Immunomodulatory Plant Defensin.
Acs Pharmacol Transl Sci, 3, 2020
7XQ8
DownloadVisualize
BU of 7xq8 by Molmil
Structure of human B-cell antigen receptor of the IgM isotype
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, B-cell antigen receptor complex-associated protein alpha chain, B-cell antigen receptor complex-associated protein beta chain, ...
Authors:Chen, M.Y, Su, Q, Shi, Y.G.
Deposit date:2022-05-07
Release date:2022-08-17
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of the human IgM B cell receptor.
Science, 377, 2022
5I1U
DownloadVisualize
BU of 5i1u by Molmil
Crystal structure of germacradien-4-ol synthase from Streptomyces citricolor
Descriptor: Germacradien-4-ol synthase, SULFATE ION
Authors:Chen, M, Christianson, D.W.
Deposit date:2016-02-06
Release date:2016-03-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mechanism of Germacradien-4-ol Synthase-Controlled Water Capture.
Biochemistry, 55, 2016
4JB1
DownloadVisualize
BU of 4jb1 by Molmil
Crystal structure of P. aeruginosa MurB in complex with NADP+
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Chen, M.W, Lohkamp, B, Schnell, R, Lescar, J, Schneider, G.
Deposit date:2013-02-19
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Substrate Channel Flexibility in Pseudomonas aeruginosa MurB Accommodates Two Distinct Substrates.
Plos One, 8, 2013
5YF4
DownloadVisualize
BU of 5yf4 by Molmil
A kinase complex MST4-MOB4
Descriptor: MOB-like protein phocein, Peptide from Serine/threonine-protein kinase 26, ZINC ION
Authors:Chen, M, Zhou, Z.C.
Deposit date:2017-09-20
Release date:2018-08-15
Last modified:2018-09-26
Method:X-RAY DIFFRACTION (1.897 Å)
Cite:The MST4-MOB4 complex disrupts the MST1-MOB1 complex in the Hippo-YAP pathway and plays a pro-oncogenic role in pancreatic cancer.
J. Biol. Chem., 293, 2018
6A8W
DownloadVisualize
BU of 6a8w by Molmil
Crystal structure of the FHA domain of Far9
Descriptor: Vacuolar protein sorting-associated protein 64
Authors:Chen, M, Zhang, W.Q, Zhou, Z.C.
Deposit date:2018-07-10
Release date:2019-07-10
Method:X-RAY DIFFRACTION (1.844 Å)
Cite:Topological Structure and Dynamic Assembly of the STRIPAK Complex
To be published
6L9F
DownloadVisualize
BU of 6l9f by Molmil
Crystal structure of TEAD4 in complex with a novel FAM181A peptide
Descriptor: ACETATE ION, Protein FAM181A, Transcriptional enhancer factor TEF-3
Authors:Chen, M, Zhou, Z.
Deposit date:2019-11-09
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.555 Å)
Cite:Crystal structure of TEAD4 in complex with a novel FAM181A peptide
To be published
7WMD
DownloadVisualize
BU of 7wmd by Molmil
PQQ-dependent alcohol dehydrogenase detoxifying DON
Descriptor: CALCIUM ION, PQQ-dependent alcohol dehydrogenase
Authors:Chen, M, Yang, H, Lv, F.
Deposit date:2022-01-14
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-Function Analysis of a Quinone-Dependent Dehydrogenase Capable of Deoxynivalenol Detoxification.
J.Agric.Food Chem., 70, 2022
7WMK
DownloadVisualize
BU of 7wmk by Molmil
PQQ-dependent alcohol dehydrogenase complexed with PQQ
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, CALCIUM ION, ...
Authors:Chen, M, Yang, H, Lv, F.
Deposit date:2022-01-15
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structure-Function Analysis of a Quinone-Dependent Dehydrogenase Capable of Deoxynivalenol Detoxification.
J.Agric.Food Chem., 70, 2022
4XOI
DownloadVisualize
BU of 4xoi by Molmil
Structure of hsAnillin bound with RhoA(Q63L) at 2.1 Angstroms resolution
Descriptor: Actin-binding protein anillin, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Sun, L, Guan, R, Lee, I.-J, Liu, Y, Chen, M, Wang, J, Wu, J, Chen, Z.
Deposit date:2015-01-16
Release date:2015-07-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.092 Å)
Cite:Mechanistic insights into the anchorage of the contractile ring by anillin and mid1
Dev.Cell, 33, 2015
4XOH
DownloadVisualize
BU of 4xoh by Molmil
Mechanistic insights into anchorage of the contractile ring from yeast to humans
Descriptor: Division mal foutue 1 protein
Authors:Chen, Z, Wu, J.-Q, Wang, J, Guan, R, Sun, L, Lee, I.-J, Liu, Y, Chen, M.
Deposit date:2015-01-16
Release date:2015-07-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Mechanistic insights into the anchorage of the contractile ring by anillin and mid1
Dev.Cell, 33, 2015
4TS0
DownloadVisualize
BU of 4ts0 by Molmil
Crystal structure of the Spinach RNA aptamer in complex with DFHBI, barium ions
Descriptor: (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one, BARIUM ION, POTASSIUM ION, ...
Authors:Warner, K.D, Chen, M.C, Song, W, Strack, R.L, Thorn, A, Jaffrey, S.R, Ferre-D'Amare, A.R.
Deposit date:2014-06-18
Release date:2014-07-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for activity of highly efficient RNA mimics of green fluorescent protein.
Nat.Struct.Mol.Biol., 21, 2014
4TS2
DownloadVisualize
BU of 4ts2 by Molmil
Crystal structure of the Spinach RNA aptamer in complex with DFHBI, magnesium ions
Descriptor: (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Warner, K.D, Chen, M.C, Song, W, Strack, R.L, Thorn, A, Jaffrey, S.R, Ferre-D'Amare, A.R.
Deposit date:2014-06-18
Release date:2014-07-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.884 Å)
Cite:Structural basis for activity of highly efficient RNA mimics of green fluorescent protein.
Nat.Struct.Mol.Biol., 21, 2014
3WJA
DownloadVisualize
BU of 3wja by Molmil
The crystal structure of human cytosolic NADP(+)-dependent malic enzyme in apo form
Descriptor: NADP-dependent malic enzyme
Authors:Li, S.-Y, Chen, M.-C, Yang, P.-C, Chan, N.-L, Liu, J.-H, Hung, H.-C.
Deposit date:2013-10-08
Release date:2014-08-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.548 Å)
Cite:Structural characteristics of the nonallosteric human cytosolic malic enzyme.
Biochim.Biophys.Acta, 1844, 2014
7Y71
DownloadVisualize
BU of 7y71 by Molmil
SARS-CoV-2 spike glycoprotein trimer complexed with Fab fragment of anti-RBD antibody E7
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab E7 heavy chain, ...
Authors:Chia, W.N, Tan, C.W, Tan, A.W.K, Young, B, Starr, T.N, Lopez, E, Fibriansah, G, Barr, J, Cheng, S, Yeoh, A.Y.Y, Yap, W.C, Lim, B.L, Ng, T.S, Sia, W.R, Zhu, F, Chen, S, Zhang, J, Greaney, A.J, Chen, M, Au, G.G, Paradkar, P, Peiris, M, Chung, A.W, Bloom, J.D, Lye, D, Lok, S.M, Wang, L.F.
Deposit date:2022-06-21
Release date:2023-08-02
Last modified:2023-08-09
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Potent pan huACE2-dependent sarbecovirus neutralizing monoclonal antibodies isolated from a BNT162b2-vaccinated SARS survivor.
Sci Adv, 9, 2023
8EAR
DownloadVisualize
BU of 8ear by Molmil
Structure of the full-length IP3R1 channel determined in the presence of Calcium/IP3/ATP
Descriptor: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
Authors:Fan, G, Baker, M.R, Terry, L.E, Arige, V, Chen, M, Seryshev, A.B, Baker, M.L, Ludtke, S.J, Yule, D.I, Serysheva, I.I.
Deposit date:2022-08-29
Release date:2022-11-23
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Conformational motions and ligand-binding underlying gating and regulation in IP 3 R channel.
Nat Commun, 13, 2022
8EAQ
DownloadVisualize
BU of 8eaq by Molmil
Structure of the full-length IP3R1 channel determined at high Ca2+
Descriptor: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, CALCIUM ION, Inositol 1,4,5-trisphosphate receptor type 1, ...
Authors:Fan, G, Baker, M.R, Terry, L.E, Arige, V, Chen, M, Seryshev, A.B, Baker, M.L, Ludtke, S.J, Yule, D.I, Serysheva, I.I.
Deposit date:2022-08-29
Release date:2022-11-23
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Conformational motions and ligand-binding underlying gating and regulation in IP 3 R channel.
Nat Commun, 13, 2022

220760

PDB entries from 2024-06-05

PDB statisticsPDBj update infoContact PDBjnumon