Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 108 results

4H00
DownloadVisualize
BU of 4h00 by Molmil
The crystal structure of mon-Zn dihydropyrimidinase from Tetraodon nigroviridis
Descriptor: ZINC ION, dihydropyrimidinase
Authors:Hsieh, Y.C, Chen, M.C, Hsu, C.C, Chan, S.I, Yang, Y.S, Chen, C.J.
Deposit date:2012-09-06
Release date:2013-09-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Lysine Carboxylation: Metal and Structural Requirements for Post-translational Modification
To be Published
4QPD
DownloadVisualize
BU of 4qpd by Molmil
Crystal structure of the hydrolase domain of 10-formyltetrahydrofolate dehydrogenase (wild-type) complex with tetrahydrofolate
Descriptor: (6S)-5,6,7,8-TETRAHYDROFOLATE, 10-formyltetrahydrofolate dehydrogenase, DI(HYDROXYETHYL)ETHER
Authors:Lin, C.C, Chen, C.J, Fu, T.F, Chuankhayan, P, Kao, T.T, Chang, W.N.
Deposit date:2014-06-23
Release date:2015-04-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of the hydrolase domain of zebrafish 10-formyltetrahydrofolate dehydrogenase and its complexes reveal a complete set of key residues for hydrolysis and product inhibition.
Acta Crystallogr.,Sect.D, 71, 2015
4GZ7
DownloadVisualize
BU of 4gz7 by Molmil
The crystal structure of Apo-dihydropyrimidinase from Tetraodon nigroviridis
Descriptor: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, dihydropyrimidinase
Authors:Hsien, Y.C, Chen, M.C, Hsu, C.C, Chan, S.I, Yang, Y.S, Chen, C.J.
Deposit date:2012-09-06
Release date:2013-09-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Lysine Carboxylation: Metal and Structure Requirements for Post-translational Modification
To be Published
4H01
DownloadVisualize
BU of 4h01 by Molmil
The crystal structure of di-Zn dihydropyrimidinase from Tetraodon nigroviridis
Descriptor: ZINC ION, dihydropyrimidinase
Authors:Hsieh, Y.C, Chen, M.C, Hsu, C.C, Chan, S.I, Yang, Y.S, Chen, C.J.
Deposit date:2012-09-06
Release date:2013-09-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Lysine Carboxylation: Metal and Structural Requirements for Post-translational Modification
To be Published
4R8V
DownloadVisualize
BU of 4r8v by Molmil
Crystal structure of the hydrolase domain of 10-formyltetrahydrofolate dehydrogenase (wild-type) complex with formate
Descriptor: 10-formyltetrahydrofolate dehydrogenase, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Lin, C.C, Chen, C.J, Fu, T.F, Chuankhayan, P, Kao, T.T, Chang, W.N.
Deposit date:2014-09-03
Release date:2015-04-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.197 Å)
Cite:Structures of the hydrolase domain of zebrafish 10-formyltetrahydrofolate dehydrogenase and its complexes reveal a complete set of key residues for hydrolysis and product inhibition.
Acta Crystallogr.,Sect.D, 71, 2015
8W4L
DownloadVisualize
BU of 8w4l by Molmil
Crystal structure of closed conformation of human immunoglobulin Fc in presence of EndoSz
Descriptor: CHLORIDE ION, Immunoglobulin gamma-1 heavy chain, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
Deposit date:2023-08-24
Release date:2024-07-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism.
Jacs Au, 4, 2024
8W4M
DownloadVisualize
BU of 8w4m by Molmil
Crystal structure of open conformation of human immunoglobulin Fc in presence of EndoSz
Descriptor: Immunoglobulin gamma-1 heavy chain, ZINC ION, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
Deposit date:2023-08-24
Release date:2024-07-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism.
Jacs Au, 4, 2024
8W4G
DownloadVisualize
BU of 8w4g by Molmil
Crystal structure of EndoSz mutant D234M, from Streptococcus equi subsp. Zooepidemicus Sz105
Descriptor: CALCIUM ION, glycoside hydrolase
Authors:Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
Deposit date:2023-08-24
Release date:2024-07-03
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism.
Jacs Au, 4, 2024
8W4N
DownloadVisualize
BU of 8w4n by Molmil
Crystal structure of EndoSz mutant D234M, in space group P21, in complex with oligosaccharide G2S1
Descriptor: CALCIUM ION, Glycoside hydrolase, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
Deposit date:2023-08-24
Release date:2024-07-03
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism.
Jacs Au, 4, 2024
8W4I
DownloadVisualize
BU of 8w4i by Molmil
Crystal structure of EndoSz mutant D234M in space group P21
Descriptor: CALCIUM ION, glycoside hydrolase
Authors:Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
Deposit date:2023-08-24
Release date:2024-07-03
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism.
Jacs Au, 4, 2024
8X8G
DownloadVisualize
BU of 8x8g by Molmil
Crystal structure of EndoSz mutant D234M, from Streptococcus equi subsp. Zooepidemicus Sz105, in complex with oligosaccharide G2S2-oxazoline
Descriptor: 2-METHYL-4,5-DIHYDRO-(1,2-DIDEOXY-ALPHA-D-GLUCOPYRANOSO)[2,1-D]-1,3-OXAZOLE, CALCIUM ION, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose, ...
Authors:Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
Deposit date:2023-11-27
Release date:2024-07-03
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism.
Jacs Au, 4, 2024
5XMJ
DownloadVisualize
BU of 5xmj by Molmil
Crystal structure of quinol:fumarate reductase from Desulfovibrio gigas
Descriptor: DODECYL-BETA-D-MALTOSIDE, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
Authors:Guan, H.H, Hsieh, Y.C, Lin, P.R, Chen, C.J.
Deposit date:2017-05-15
Release date:2018-06-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural insights into the electron/proton transfer pathways in the quinol:fumarate reductase from Desulfovibrio gigas.
Sci Rep, 8, 2018
5YL0
DownloadVisualize
BU of 5yl0 by Molmil
The crystal structure of Penaeus vannamei nodavirus P-domain (P212121)
Descriptor: Capsid protein
Authors:Chen, N.C, Yoshimura, M, Lin, C.C, Guan, H.H, Chuankhayan, P, Chen, C.J.
Deposit date:2017-10-16
Release date:2018-10-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism.
Commun Biol, 2, 2019
5YKX
DownloadVisualize
BU of 5ykx by Molmil
The crystal structure of Macrobrachium rosenbergii nodavirus P-domain with Cd ion
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CADMIUM ION, Capsid protein, ...
Authors:Chen, N.C, Yoshimura, M, Lin, C.C, Guan, H.H, Chuankhayan, P, Chen, C.J.
Deposit date:2017-10-16
Release date:2018-10-24
Last modified:2019-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism.
Commun Biol, 2, 2019
5YKZ
DownloadVisualize
BU of 5ykz by Molmil
The crystal structure of Penaeus vannamei nodavirus P-domain (P21)
Descriptor: Capsid protein
Authors:Chen, N.C, Yoshimura, M, Lin, C.C, Guan, H.H, Chuankhayan, P, Chen, C.J.
Deposit date:2017-10-16
Release date:2018-10-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism.
Commun Biol, 2, 2019
5YKV
DownloadVisualize
BU of 5ykv by Molmil
The crystal structure of Macrobrachium rosenbergii nodavirus P-domain
Descriptor: Capsid protein
Authors:Chen, N.C, Yoshimura, M, Lin, C.C, Guan, H.H, Chuankhayan, P, Chen, C.J.
Deposit date:2017-10-16
Release date:2018-10-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism.
Commun Biol, 2, 2019
5YKU
DownloadVisualize
BU of 5yku by Molmil
The crystal structure of Macrobrachium rosenbergii nodavirus P-domain with Zn ions
Descriptor: Capsid protein, ZINC ION
Authors:Chen, N.C, Yoshimura, M, Lin, C.C, Guan, H.H, Chuankhayan, P, Chen, C.J.
Deposit date:2017-10-16
Release date:2018-10-24
Last modified:2019-03-13
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism.
Commun Biol, 2, 2019
5YL1
DownloadVisualize
BU of 5yl1 by Molmil
T=1 subviral particle of Penaeus vannamei nodavirus capsid protein deletion mutant (delta 1-37 & 251-368)
Descriptor: CALCIUM ION, Capsid protein
Authors:Chen, N.C, Yoshimura, M, Lin, C.C, Guan, H.H, Chuankhayan, P, Chen, C.J.
Deposit date:2017-10-16
Release date:2018-12-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism.
Commun Biol, 2, 2019
6AB6
DownloadVisualize
BU of 6ab6 by Molmil
Cryo-EM structure of T=3 Penaeus vannamei nodavirus
Descriptor: CALCIUM ION, Capsid protein
Authors:Chen, N.C, Miyazaki, N, Yoshimura, M, Guan, H.H, Lin, C.C, Iwasaki, K, Chen, C.J.
Deposit date:2018-07-20
Release date:2019-03-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism.
Commun Biol, 2, 2019
6AB5
DownloadVisualize
BU of 6ab5 by Molmil
Cryo-EM structure of T=1 Penaeus vannamei nodavirus
Descriptor: Capsid protein
Authors:Chen, N.C, Miyazaki, N, Yoshimura, M, Guan, H.H, Lin, C.C, Iwasaki, K, Chen, C.J.
Deposit date:2018-07-20
Release date:2019-03-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism.
Commun Biol, 2, 2019
3DC0
DownloadVisualize
BU of 3dc0 by Molmil
Crystal structure of native alpha-amylase from Bacillus sp. KR-8104
Descriptor: CALCIUM ION, alpha-amylase
Authors:Alikhajeh, J, Khajeh, K, Ranjbar, B, Naderi-Manesh, M, Naderi-Manesh, H, Chen, C.J.
Deposit date:2008-06-03
Release date:2008-06-17
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Crystal structure of native alpha-amylase from Bacillus sp. KR-8104.
to be published
3E5R
DownloadVisualize
BU of 3e5r by Molmil
Crystal structure and Functional Analysis of Glyceraldehyde-3-phosphate Dehydrogenase from Oryza Sativa
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Tien, Y.C, Lin, Y.H, Chang, S.L, Chen, C.J.
Deposit date:2008-08-14
Release date:2009-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure and Functional Analysis of Glyceraldehyde-3-phosphate Dehydrogenase from Oryza Sativa
To be published
3E6A
DownloadVisualize
BU of 3e6a by Molmil
Crystal structure and Functional Analysis of Glyceraldehyde-3-phosphate Dehydrogenase from Oryza Sativa
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, SULFATE ION
Authors:Tien, Y.C, Lin, Y.H, Chang, S.L, Chen, C.J.
Deposit date:2008-08-15
Release date:2009-08-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.77 Å)
Cite:Crystal structure and Functional Analysis of Glyceraldehyde-3-phosphate Dehydrogenase from Oryza Sativa
To be Published
3K7N
DownloadVisualize
BU of 3k7n by Molmil
Structures of two elapid snake venom metalloproteases with distinct activities highlight the disulfide patterns in the D domain of ADAMalysin family proteins
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Guan, H.H, Huang, Y.W, Wu, W.G, Chen, C.J.
Deposit date:2009-10-13
Release date:2010-03-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of two elapid snake venom metalloproteases with distinct activities highlight the disulfide patterns in the D domain of ADAMalysin family proteins
J.Struct.Biol., 169, 2010
3K7L
DownloadVisualize
BU of 3k7l by Molmil
Structures of two elapid snake venom metalloproteases with distinct activities highlight the disulfide patterns in the D domain of ADAMalysin family proteins
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Atragin, CALCIUM ION, ...
Authors:Guan, H.H, Wu, W.G, Chen, C.J.
Deposit date:2009-10-13
Release date:2010-03-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of two elapid snake venom metalloproteases with distinct activities highlight the disulfide patterns in the D domain of ADAMalysin family proteins
J.Struct.Biol., 169, 2010

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon