Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 153 results

3IZM
DownloadVisualize
BU of 3izm by Molmil
Mm-cpn wildtype with ATP
Descriptor: Chaperonin
Authors:Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
Deposit date:2010-10-30
Release date:2011-02-02
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3IZN
DownloadVisualize
BU of 3izn by Molmil
Mm-cpn deltalid with ATP
Descriptor: Chaperonin
Authors:Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
Deposit date:2010-10-30
Release date:2011-02-02
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3IZL
DownloadVisualize
BU of 3izl by Molmil
Mm-cpn rls deltalid with ATP and AlFx
Descriptor: Mm-cpn rls deltalid
Authors:Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
Deposit date:2010-10-29
Release date:2011-02-02
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3IZK
DownloadVisualize
BU of 3izk by Molmil
Mm-cpn rls deltalid with ATP
Descriptor: Chaperonin
Authors:Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
Deposit date:2010-10-29
Release date:2011-02-02
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
7WM7
DownloadVisualize
BU of 7wm7 by Molmil
Threonyl-tRNA synthetase from Salmonella enterica in complex with an inhibitor
Descriptor: (2S,3R)-2-azanyl-N-[5-(7-bromanyl-6-chloranyl-4-oxidanylidene-quinazolin-3-yl)pentyl]-3-oxidanyl-N-[[3-(1-oxidanylidene-2,3-dihydroisoindol-5-yl)phenyl]methyl]butanamide, Threonine--tRNA ligase, ZINC ION
Authors:Cai, Z, Chen, B, Yu, Y, Zhou, H.
Deposit date:2022-01-14
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Design, Synthesis, and Proof-of-Concept of Triple-Site Inhibitors against Aminoacyl-tRNA Synthetases.
J.Med.Chem., 65, 2022
7WMF
DownloadVisualize
BU of 7wmf by Molmil
Threonyl-tRNA synthetase from Salmonella enterica in complex with an inhibitor
Descriptor: (2S,3R)-2-azanyl-N-[(1R)-2-[3-[6,7-bis(chloranyl)-4-oxidanylidene-quinazolin-3-yl]propanoylamino]-1-[3-[4-(trifluoromethyl)phenyl]phenyl]ethyl]-3-oxidanyl-butanamide, 1,2-ETHANEDIOL, Threonine--tRNA ligase, ...
Authors:Cai, Z, Chen, B, Yu, Y, Zhou, H.
Deposit date:2022-01-14
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Design, Synthesis, and Proof-of-Concept of Triple-Site Inhibitors against Aminoacyl-tRNA Synthetases.
J.Med.Chem., 65, 2022
7WMI
DownloadVisualize
BU of 7wmi by Molmil
Threonyl-tRNA synthetase from Salmonella enterica in complex with an inhibitor
Descriptor: (2S,3R)-2-azanyl-N-[(1R)-2-[3-(7-bromanyl-6-chloranyl-4-oxidanylidene-quinazolin-3-yl)propanoylamino]-1-(3-phenylphenyl)ethyl]-3-oxidanyl-butanamide, 1,2-ETHANEDIOL, Threonine--tRNA ligase, ...
Authors:Cai, Z, Chen, B, Yu, Y, Zhou, H.
Deposit date:2022-01-14
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design, Synthesis, and Proof-of-Concept of Triple-Site Inhibitors against Aminoacyl-tRNA Synthetases.
J.Med.Chem., 65, 2022
7VIC
DownloadVisualize
BU of 7vic by Molmil
The crystal structure of SARS-CoV-2 3C-like protease in complex with a traditional Chinese Medicine Inhibitors
Descriptor: (1beta,6beta,7beta,8alpha,9beta,10alpha,13alpha,14R,16beta)-1,6,7,14-tetrahydroxy-7,20-epoxykauran-15-one, 3C-like proteinase
Authors:Zhong, B, Chen, B, Zhou, H, Sun, L.
Deposit date:2021-09-26
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Oridonin Inhibits SARS-CoV-2 by Targeting Its 3C-Like Protease.
Small Sci, 2, 2022
7WPX
DownloadVisualize
BU of 7wpx by Molmil
Methionyl-tRNA synthetase from Staphylococcus aureus complexed with a fragment and ATP
Descriptor: 1,2-ETHANEDIOL, 6-chloranylimidazo[2,1-b][1,3]thiazole, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Yi, J, Cai, Z, Qiu, H, Lu, F, Chen, B, Luo, Z, Gu, Q, Xu, J, Zhou, H.
Deposit date:2022-01-24
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Fragment screening and structural analyses highlight the ATP-assisted ligand binding for inhibitor discovery against type 1 methionyl-tRNA synthetase.
Nucleic Acids Res., 50, 2022
7Y1I
DownloadVisualize
BU of 7y1i by Molmil
Crystal Structure of TTR-G67R
Descriptor: Transthyretin
Authors:Luan, X.D, Chen, B.X, Zhang, S.Y.
Deposit date:2022-06-08
Release date:2023-03-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Crystal Structure of TTR-G67R
To Be Published
7WPT
DownloadVisualize
BU of 7wpt by Molmil
Methionyl-tRNA synthetase from Staphylococcus aureus complexed with a fragment M2-80 and ATP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
Authors:Yi, J, Cai, Z, Qiu, H, Lu, F, Chen, B, Luo, Z, Gu, Q, Xu, J, Zhou, H.
Deposit date:2022-01-24
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Fragment screening and structural analyses highlight the ATP-assisted ligand binding for inhibitor discovery against type 1 methionyl-tRNA synthetase.
Nucleic Acids Res., 50, 2022
7WPK
DownloadVisualize
BU of 7wpk by Molmil
Methionyl-tRNA synthetase from Staphylococcus aureus complexed with L-Met
Descriptor: METHIONINE, Methionine--tRNA ligase
Authors:Yi, J, Cai, Z, Qiu, H, Lu, F, Chen, B, Luo, Z, Gu, Q, Xu, J, Zhou, H.
Deposit date:2022-01-24
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Fragment screening and structural analyses highlight the ATP-assisted ligand binding for inhibitor discovery against type 1 methionyl-tRNA synthetase.
Nucleic Acids Res., 50, 2022
7WPM
DownloadVisualize
BU of 7wpm by Molmil
Methionyl-tRNA synthetase from Staphylococcus aureus complexed with a fragment and ATP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, Methionine--tRNA ligase, ...
Authors:Yi, J, Cai, Z, Qiu, H, Lu, F, Chen, B, Luo, Z, Gu, Q, Xu, J, Zhou, H.
Deposit date:2022-01-24
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Fragment screening and structural analyses highlight the ATP-assisted ligand binding for inhibitor discovery against type 1 methionyl-tRNA synthetase.
Nucleic Acids Res., 50, 2022
7WQ0
DownloadVisualize
BU of 7wq0 by Molmil
Methionyl-tRNA synthetase from Staphylococcus aureus complexed with a fragment and ATP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, Methionine--tRNA ligase, ...
Authors:Yi, J, Cai, Z, Qiu, H, Lu, F, Chen, B, Luo, Z, Gu, Q, Xu, J, Zhou, H.
Deposit date:2022-01-24
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Fragment screening and structural analyses highlight the ATP-assisted ligand binding for inhibitor discovery against type 1 methionyl-tRNA synthetase.
Nucleic Acids Res., 50, 2022
7WPN
DownloadVisualize
BU of 7wpn by Molmil
Methionyl-tRNA synthetase from Staphylococcus aureus complexed with a phenylbenzimidazole inhibitor and ATP
Descriptor: (phenylmethyl) N-[(2R)-2-[2-(4-bromanyl-3-oxidanyl-phenyl)-5-(methylcarbamoyl)benzimidazol-1-yl]-2-(3,4-dimethoxyphenyl)ethyl]carbamate, 1,2-ETHANEDIOL, ACETIC ACID, ...
Authors:Yi, J, Cai, Z, Qiu, H, Lu, F, Chen, B, Luo, Z, Gu, Q, Xu, J, Zhou, H.
Deposit date:2022-01-24
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Fragment screening and structural analyses highlight the ATP-assisted ligand binding for inhibitor discovery against type 1 methionyl-tRNA synthetase.
Nucleic Acids Res., 50, 2022
7WPL
DownloadVisualize
BU of 7wpl by Molmil
Methionyl-tRNA synthetase from Staphylococcus aureus complexed with ATP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, Methionine--tRNA ligase
Authors:Yi, J, Cai, Z, Qiu, H, Lu, F, Chen, B, Luo, Z, Gu, Q, Xu, J, Zhou, H.
Deposit date:2022-01-24
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Fragment screening and structural analyses highlight the ATP-assisted ligand binding for inhibitor discovery against type 1 methionyl-tRNA synthetase.
Nucleic Acids Res., 50, 2022
7WPJ
DownloadVisualize
BU of 7wpj by Molmil
Methionyl-tRNA synthetase from Staphylococcus aureus
Descriptor: 1,2-ETHANEDIOL, Methionine--tRNA ligase
Authors:Yi, J, Cai, Z, Qiu, H, Lu, F, Chen, B, Luo, Z, Gu, Q, Xu, J, Zhou, H.
Deposit date:2022-01-24
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Fragment screening and structural analyses highlight the ATP-assisted ligand binding for inhibitor discovery against type 1 methionyl-tRNA synthetase.
Nucleic Acids Res., 50, 2022
7WPI
DownloadVisualize
BU of 7wpi by Molmil
Methionyl-tRNA synthetase from Staphylococcus aureus complexed with a phenylbenzimidazole inhibitor
Descriptor: 1,2-ETHANEDIOL, 2-(4-bromanyl-3-oxidanyl-phenyl)-1-[(1R)-2-[2-(2-tert-butylphenoxy)ethanoylamino]-1-(3,4-dimethoxyphenyl)ethyl]-N-methyl-benzimidazole-5-carboxamide, ACETATE ION, ...
Authors:Yi, J, Cai, Z, Qiu, H, Lu, F, Chen, B, Luo, Z, Gu, Q, Xu, J, Zhou, H.
Deposit date:2022-01-24
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Fragment screening and structural analyses highlight the ATP-assisted ligand binding for inhibitor discovery against type 1 methionyl-tRNA synthetase.
Nucleic Acids Res., 50, 2022
6J71
DownloadVisualize
BU of 6j71 by Molmil
HuA21-scFv in complex with the extracellular domain(ECD) of HER2
Descriptor: Receptor tyrosine-protein kinase erbB-2, anti-HER2 humanized antibody HuA21, beta-D-mannopyranose, ...
Authors:Wang, Z, Guo, G, Cheng, B, Zhu, Z, Niu, L, Zhang, H.
Deposit date:2019-01-16
Release date:2019-02-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.918 Å)
Cite:Structural insight into a matured humanized monoclonal antibody HuA21 against HER2-overexpressing cancer cells.
Acta Crystallogr D Struct Biol, 75, 2019
5MUS
DownloadVisualize
BU of 5mus by Molmil
Structure of the C-terminal domain of a reptarenavirus L protein
Descriptor: CHLORIDE ION, GLYCEROL, L protein
Authors:Rosenthal, M, Gogrefe, N, Reguera, J, Vogel, D, Rauschenberger, B, Cusack, S, Gunther, S, Reindl, S.
Deposit date:2017-01-14
Release date:2017-05-17
Last modified:2017-05-24
Method:X-RAY DIFFRACTION (2.009 Å)
Cite:Structural insights into reptarenavirus cap-snatching machinery.
PLoS Pathog., 13, 2017
6UX6
DownloadVisualize
BU of 6ux6 by Molmil
Cruzain covalently bound by a vinylsulfone compound
Descriptor: Cruzipain, GLYCEROL, Nalpha-[(benzyloxy)carbonyl]-N-[(2S)-1-phenyl-4-(phenylsulfonyl)butan-2-yl]-L-phenylalaninamide
Authors:Zhai, X, Tang, S, Chenna, B.C, Meek, T.D, Sacchettini, J.C.
Deposit date:2019-11-06
Release date:2020-11-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Cruzain covalently bound by a vinylsulfone compound
To Be Published
5MUY
DownloadVisualize
BU of 5muy by Molmil
Structure of a C-terminal domain of a reptarenavirus L protein with m7GTP
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, L protein
Authors:Rosenthal, M, Gogrefe, N, Reguera, J, Vogel, D, Rauschenberger, B, Cusack, S, Gunther, S, Reindl, S.
Deposit date:2017-01-14
Release date:2017-05-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural insights into reptarenavirus cap-snatching machinery.
PLoS Pathog., 13, 2017
5MV0
DownloadVisualize
BU of 5mv0 by Molmil
Structure of an N-terminal domain of a reptarenavirus L protein
Descriptor: L protein, PHOSPHATE ION
Authors:Rosenthal, M, Gogrefe, N, Reguera, J, Vogel, D, Rauschenberger, B, Cusack, S, Gunther, S, Reindl, S.
Deposit date:2017-01-14
Release date:2017-05-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural insights into reptarenavirus cap-snatching machinery.
PLoS Pathog., 13, 2017
5MUZ
DownloadVisualize
BU of 5muz by Molmil
Structure of a C-terminal domain of a reptarenavirus L protein
Descriptor: L protein
Authors:Rosenthal, M, Gogrefe, N, Reguera, J, Vogel, D, Rauschenberger, B, Cusack, S, Gunther, S, Reindl, S.
Deposit date:2017-01-14
Release date:2017-05-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.776 Å)
Cite:Structural insights into reptarenavirus cap-snatching machinery.
PLoS Pathog., 13, 2017
1DEG
DownloadVisualize
BU of 1deg by Molmil
THE LINKER OF DES-GLU84 CALMODULIN IS BENT AS SEEN IN THE CRYSTAL STRUCTURE
Descriptor: CALCIUM ION, CALMODULIN
Authors:Raghunathan, S, Chandross, R, Cheng, B.P, Persechini, A, Sobottk, S.E, Kretsinger, R.H.
Deposit date:1993-06-07
Release date:1994-05-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The linker of des-Glu84-calmodulin is bent.
Proc.Natl.Acad.Sci.Usa, 90, 1993

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon