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PDB: 1056 results

3MG6
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BU of 3mg6 by Molmil
Structure of yeast 20S open-gate proteasome with Compound 6
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, N~2~-{[(1S)-6-methoxy-3-oxo-2,3-dihydro-1H-inden-1-yl]acetyl}-N-{(1S)-1-[(4-methylbenzyl)carbamoyl]-3-phenylpropyl}-L-threoninamide, ...
Authors:Sintchak, M.D.
Deposit date:2010-04-05
Release date:2011-05-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Characterization of a new series of non-covalent proteasome inhibitors with exquisite potency and selectivity for the 20S beta5-subunit.
Biochem.J., 430, 2010
3MG0
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BU of 3mg0 by Molmil
Structure of yeast 20S proteasome with bortezomib
Descriptor: N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE, Proteasome component C1, Proteasome component C11, ...
Authors:Sintchak, M.D.
Deposit date:2010-04-05
Release date:2011-05-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Characterization of a new series of non-covalent proteasome inhibitors with exquisite potency and selectivity for the 20S beta5-subunit.
Biochem.J., 430, 2010
1M1L
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BU of 1m1l by Molmil
Human Suppressor of Fused (N-terminal domain)
Descriptor: Suppressor of Fused
Authors:Merchant, M, Vajdos, F.F, Ultsch, M, Maun, H.R, Wendt, U, Cannon, J, Lazarus, R.A, de Vos, A.M, de Sauvage, F.J.
Deposit date:2002-06-19
Release date:2004-02-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Suppressor of fused regulates Gli activity through a dual binding mechanism
Mol.Cell.Biol., 24, 2004
3OEV
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BU of 3oev by Molmil
Structure of yeast 20S open-gate proteasome with Compound 25
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-(benzyloxy)-N-[(2S,3R)-3-hydroxy-1-{[(2S)-1-{[(3-methylthiophen-2-yl)methyl]amino}-1-oxo-4-phenylbutan-2-yl]amino}-1-oxobutan-2-yl]benzamide, MAGNESIUM ION, ...
Authors:Sintchak, M.D.
Deposit date:2010-08-13
Release date:2011-07-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Optimization of a series of dipeptides with a P3 threonine residue as non-covalent inhibitors of the chymotrypsin-like activity of the human 20S proteasome.
Bioorg.Med.Chem.Lett., 20, 2010
4NET
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BU of 4net by Molmil
Crystal structure of ADC-1 beta-lactamase
Descriptor: AmpC, GLYCEROL, NITRATE ION
Authors:Bhattacharya, M, Toth, M, Antunes, N.T, Smith, C.A, Vakulenko, S.B.
Deposit date:2013-10-30
Release date:2014-03-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure of the extended-spectrum class C beta-lactamase ADC-1 from Acinetobacter baumannii.
Acta Crystallogr.,Sect.D, 70, 2014
3OEU
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BU of 3oeu by Molmil
Structure of yeast 20S open-gate proteasome with Compound 24
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, N-{(2S)-1-[(2-chlorobenzyl)amino]-1-oxo-4-phenylbutan-2-yl}-N~2~-[3-(2-methylphenyl)propanoyl]-L-threoninamide, ...
Authors:Sintchak, M.D.
Deposit date:2010-08-13
Release date:2011-07-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Optimization of a series of dipeptides with a P3 threonine residue as non-covalent inhibitors of the chymotrypsin-like activity of the human 20S proteasome.
Bioorg.Med.Chem.Lett., 20, 2010
1JR1
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BU of 1jr1 by Molmil
Crystal structure of Inosine Monophosphate Dehydrogenase in complex with Mycophenolic Acid
Descriptor: INOSINIC ACID, Inosine-5'-Monophosphate Dehydrogenase 2, MYCOPHENOLIC ACID, ...
Authors:Sintchak, M.D, Fleming, M.A, Futer, O, Raybuck, S.A, Chambers, S.P, Caron, P.R, Murcko, M.A, Wilson, K.P.
Deposit date:2001-08-09
Release date:2001-09-05
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and mechanism of inosine monophosphate dehydrogenase in complex with the immunosuppressant mycophenolic acid.
Cell(Cambridge,Mass.), 85, 1996
6HHC
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BU of 6hhc by Molmil
Allosteric Inhibition as a new mode of Action for BAY 1213790, a Neutralizing Antibody Targeting the Activated form of Coagulation Factor XI
Descriptor: Coagulation factor XI, DIMETHYL SULFOXIDE, FXIA ANTIBODY FAB HEAVY CHAIN, ...
Authors:Schaefer, M, Buchmueller, A, Dittmer, F, Strassburger, J, Wilmen, A.
Deposit date:2018-08-27
Release date:2019-09-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Allosteric Inhibition as a New Mode of Action for BAY 1213790, a Neutralizing Antibody Targeting the Activated Form of Coagulation Factor XI.
J.Mol.Biol., 431, 2019
2IB5
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BU of 2ib5 by Molmil
Structural characterization of a blue chromoprotein and its yellow mutant from the sea anemone cnidopus japonicus
Descriptor: Chromo protein, PHOSPHATE ION
Authors:Chan, M.C.Y, Bosanac, I, Ikura, M.
Deposit date:2006-09-10
Release date:2006-10-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Characterization of a Blue Chromoprotein and Its Yellow Mutant from the Sea Anemone Cnidopus Japonicus
J.Biol.Chem., 281, 2006
2IB6
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BU of 2ib6 by Molmil
Structural characterization of a blue chromoprotein and its yellow mutant from the sea anemone cnidopus japonicus
Descriptor: PHOSPHATE ION, Yellow mutant chromo protein
Authors:Chan, M.C.Y, Bosanac, I, Ho, D, Prive, G, Ikura, M.
Deposit date:2006-09-10
Release date:2006-10-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Characterization of a Blue Chromoprotein and Its Yellow Mutant from the Sea Anemone Cnidopus Japonicus
J.Biol.Chem., 281, 2006
3Q96
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BU of 3q96 by Molmil
B-Raf kinase domain in complex with a tetrahydronaphthalene inhibitor
Descriptor: (2S)-N-[3-(2-aminopropan-2-yl)-5-(trifluoromethyl)phenyl]-7-[(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-4-yl)oxy]-1,2,3,4-tetrahydronaphthalene-2-carboxamide, Serine/threonine-protein kinase B-raf
Authors:Sintchak, M.D, Aertgeerts, K, Yano, J.
Deposit date:2011-01-07
Release date:2011-03-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Design and optimization of potent and orally bioavailable tetrahydronaphthalene raf inhibitors.
J.Med.Chem., 54, 2011
4DPV
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BU of 4dpv by Molmil
PARVOVIRUS/DNA COMPLEX
Descriptor: DNA (5'-D(*AP*TP*AP*CP*CP*TP*CP*TP*TP*GP*C)-3'), MAGNESIUM ION, PROTEIN (PARVOVIRUS COAT PROTEIN)
Authors:Chapman, M.S, Rossmann, M.G.
Deposit date:1996-02-01
Release date:1997-04-01
Last modified:2023-04-19
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Canine parvovirus capsid structure, analyzed at 2.9 A resolution.
J.Mol.Biol., 264, 1996
3THB
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BU of 3thb by Molmil
Structure of PLK1 kinase domain in complex with a benzolactam-derived inhibitor
Descriptor: 9-chloro-2-({5-[3-(dimethylamino)propyl]-2-methylpyridin-3-yl}amino)-5,7-dihydro-6H-pyrimido[5,4-d][1]benzazepine-6-thi one, Serine/threonine-protein kinase PLK1, ZINC ION
Authors:Sintchak, M.D.
Deposit date:2011-08-18
Release date:2011-11-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery of a Potent and Orally Bioavailable Benzolactam-Derived Inhibitor of Polo-Like Kinase 1 (MLN0905).
J.Med.Chem., 55, 2012
3SQB
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BU of 3sqb by Molmil
Structure of the major type 1 pilus subunit FimA bound to the FimC chaperone
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Chaperone protein fimC, ...
Authors:Scharer, M.A, Eidam, O, Grutter, M.G, Glockshuber, R, Capitani, G.
Deposit date:2011-07-05
Release date:2012-05-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Quality control of disulfide bond formation in pilus subunits by the chaperone FimC.
Nat.Chem.Biol., 8, 2012
4BG9
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BU of 4bg9 by Molmil
Apo form of a putative sugar kinase MK0840 from Methanopyrus kandleri (orthorhombic space group)
Descriptor: ACETATE ION, CHLORIDE ION, POTASSIUM ION, ...
Authors:Schacherl, M, Waltersperger, S.M, Baumann, U.
Deposit date:2013-03-24
Release date:2013-11-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Structural Characterization of the Ribonuclease H-Like Type Askha Superfamily Kinase Mk0840 from Methanopyrus Kandleri
Acta Crystallogr.,Sect.D, 69, 2013
4BGB
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BU of 4bgb by Molmil
Nucleotide-bound closed form of a putative sugar kinase MK0840 from Methanopyrus kandleri
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, GLYCEROL, ...
Authors:Schacherl, M, Baumann, U.
Deposit date:2013-03-24
Release date:2013-11-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Structural Characterization of the Ribonuclease H-Like Type Askha Superfamily Kinase Mk0840 from Methanopyrus Kandleri
Acta Crystallogr.,Sect.D, 69, 2013
3O75
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BU of 3o75 by Molmil
Crystal structure of Cra transcriptional dual regulator from Pseudomonas putida in complex with fructose 1-phosphate'
Descriptor: 1-O-phosphono-beta-D-fructofuranose, Fructose transport system repressor FruR
Authors:Chavarria, M, Santiago, C, Platero, R, Krell, T, Casasnovas, J.M, de Lorenzo, V.
Deposit date:2010-07-30
Release date:2011-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Fructose 1-phosphate is the preferred effector of the metabolic regulator Cra of Pseudomonas putida
J.Biol.Chem., 286, 2011
4G4I
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BU of 4g4i by Molmil
Crystal structure of glucuronoyl esterase S213A mutant from Sporotrichum thermophile determined at 1.9 A resolution
Descriptor: 1,2-ETHANEDIOL, 4-O-methyl-glucuronoyl methylesterase, GLYCEROL
Authors:Charvagi, M.D, Dimarogona, M, Topakas, E, Christakopoulos, P, Chrysina, E.D.
Deposit date:2012-07-16
Release date:2013-01-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structure of a novel glucuronoyl esterase from Myceliophthora thermophila gives new insights into its role as a potential biocatalyst.
Acta Crystallogr.,Sect.D, 69, 2013
3SDK
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BU of 3sdk by Molmil
Structure of yeast 20S open-gate proteasome with Compound 34
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, N-[(2S)-3-(3-tert-butyl-1,2,4-oxadiazol-5-yl)-1-({(2S)-1-[(4-methylbenzyl)amino]-1-oxo-4-phenylbutan-2-yl}amino)-1-oxopropan-2-yl]-5-methyl-1,2-oxazole-3-carboxamide, ...
Authors:Sintchak, M.D.
Deposit date:2011-06-09
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Optimization of a series of dipeptides with a P3 threonine residue as non-covalent inhibitors of the chymotrypsin-like activity of the human 20S proteasome.
Bioorg.Med.Chem.Lett., 20, 2010
4G4G
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BU of 4g4g by Molmil
Crystal structure of recombinant glucuronoyl esterase from Sporotrichum thermophile determined at 1.55 A resolution
Descriptor: 1,2-ETHANEDIOL, 4-O-methyl-glucuronoyl methylesterase, GLYCEROL
Authors:Charavgi, M.D, Dimarogona, M, Topakas, E, Christakopoulos, P, Chrysina, E.D.
Deposit date:2012-07-16
Release date:2013-01-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The structure of a novel glucuronoyl esterase from Myceliophthora thermophila gives new insights into its role as a potential biocatalyst.
Acta Crystallogr.,Sect.D, 69, 2013
4DWH
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BU of 4dwh by Molmil
Structure of the major type 1 pilus subunit FIMA bound to the FIMC (2.5 A resolution)
Descriptor: Chaperone protein fimC, DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, ...
Authors:Scharer, M.A, Puorger, C, Crespo, M, Glockshuber, R, Capitani, G.
Deposit date:2012-02-24
Release date:2012-05-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Quality control of disulfide bond formation in pilus subunits by the chaperone FimC.
Nat.Chem.Biol., 8, 2012
3SDI
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BU of 3sdi by Molmil
Structure of yeast 20S open-gate proteasome with Compound 20
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, N~4~-(2,2-dimethylpropyl)-N~1~-{(2S)-1-[(4-methylbenzyl)amino]-1-oxo-4-phenylbutan-2-yl}-N~2~-[(5-methyl-1,2-oxazol-3-yl)carbonyl]-L-aspartamide, ...
Authors:Sintchak, M.D.
Deposit date:2011-06-09
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Optimization of a series of dipeptides with a P3 threonine residue as non-covalent inhibitors of the chymotrypsin-like activity of the human 20S proteasome.
Bioorg.Med.Chem.Lett., 20, 2010
4CGC
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BU of 4cgc by Molmil
Crystal structure of the trimerization domain of human EML4
Descriptor: ECHINODERM MICROTUBULE-ASSOCIATED PROTEIN-LIKE 4
Authors:Richards, M.W, Bayliss, R.
Deposit date:2013-11-21
Release date:2014-12-10
Last modified:2015-04-29
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Microtubule Association of Eml Proteins and the Eml4-Alk Variant 3 Oncoprotein Require an N-Terminal Trimerization Domain.
Biochem.J., 467, 2015
3O74
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BU of 3o74 by Molmil
Crystal structure of Cra transcriptional dual regulator from Pseudomonas putida
Descriptor: Fructose transport system repressor FruR, GLYCEROL
Authors:Chavarria, M, Santiago, C, Platero, R, Krell, T, Casasnovas, J.M, de Lorenzo, V.
Deposit date:2010-07-30
Release date:2011-01-12
Last modified:2011-12-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fructose 1-phosphate is the preferred effector of the metabolic regulator Cra of Pseudomonas putida
J.Biol.Chem., 286, 2011
1L1L
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BU of 1l1l by Molmil
CRYSTAL STRUCTURE OF B-12 DEPENDENT (CLASS II) RIBONUCLEOTIDE REDUCTASE
Descriptor: RIBONUCLEOSIDE TRIPHOSPHATE REDUCTASE
Authors:Sintchak, M.D, Arjara, G, Kellogg, B.A, Stubbe, J, Drennan, C.L.
Deposit date:2002-02-18
Release date:2002-04-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The crystal structure of class II ribonucleotide reductase reveals how an allosterically regulated monomer mimics a dimer.
Nat.Struct.Biol., 9, 2002

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