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PDB: 137 results

1MEQ
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BU of 1meq by Molmil
HIV gp120 C5
Descriptor: Exterior Membrane Glycoprotein (GP120)
Authors:Caffrey, M, Jacobs, A, Guilhaudis, L.
Deposit date:2002-08-08
Release date:2002-12-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of the HIV gp120 C5 Domain
Eur.J.Biochem., 269, 2002
2GUF
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BU of 2guf by Molmil
In meso crystal structure of the cobalamin transporter, BtuB
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, FORMIC ACID, Vitamin B12 transporter btuB, ...
Authors:Caffrey, M, Cherezov, V, Yamashita, E, Cramer, W.A.
Deposit date:2006-04-29
Release date:2006-12-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:In Meso Structure of the Cobalamin Transporter, BtuB, at 1.95 A Resolution.
J.Mol.Biol., 364, 2006
2EZP
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BU of 2ezp by Molmil
SOLUTION NMR STRUCTURE OF ECTODOMAIN OF SIV GP41, MODELS 1-10 OF AN ENSEMBLE OF 40 SIMULATED ANNEALING STRUCTURES
Descriptor: GP41
Authors:Caffrey, M, Gronenborn, A.M, Clore, G.M.
Deposit date:1998-05-20
Release date:1998-10-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the 44 kDa ectodomain of SIV gp41.
EMBO J., 17, 1998
2EZQ
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BU of 2ezq by Molmil
SOLUTION NMR STRUCTURE OF ECTODOMAIN OF SIV GP41, MODELS 11-20 OF AN ENSEMBLE OF 40 SIMULATED ANNEALING STRUCTURES
Descriptor: GP41
Authors:Caffrey, M, Gronenborn, A.M, Clore, G.M.
Deposit date:1998-05-20
Release date:1998-10-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the 44 kDa ectodomain of SIV gp41.
EMBO J., 17, 1998
2EZS
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BU of 2ezs by Molmil
SOLUTION NMR STRUCTURE OF ECTODOMAIN OF SIV GP41, MODELS 31-40 OF AN ENSEMBLE OF 40 SIMULATED ANNEALING STRUCTURES
Descriptor: GP41
Authors:Caffrey, M, Gronenborn, A.M, Clore, G.M.
Deposit date:1998-05-20
Release date:1998-10-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the 44 kDa ectodomain of SIV gp41.
EMBO J., 17, 1998
2EZR
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BU of 2ezr by Molmil
SOLUTION NMR STRUCTURE OF ECTODOMAIN OF SIV GP41, MODELS 21-30 OF AN ENSEMBLE OF 40 SIMULATED ANNEALING STRUCTURES
Descriptor: GP41
Authors:Caffrey, M, Gronenborn, A.M, Clore, G.M.
Deposit date:1998-05-20
Release date:1998-10-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the 44 kDa ectodomain of SIV gp41.
EMBO J., 17, 1998
2EZO
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BU of 2ezo by Molmil
SOLUTION NMR STRUCTURE OF ECTODOMAIN OF SIV GP41, RESTRAINED REGULARIZED MEAN STRUCTURE
Descriptor: GP41
Authors:Caffrey, M, Gronenborn, A.M, Clore, G.M.
Deposit date:1998-05-20
Release date:1998-10-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the 44 kDa ectodomain of SIV gp41.
EMBO J., 17, 1998
2FXP
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BU of 2fxp by Molmil
Solution Structure of the SARS-Coronavirus HR2 Domain
Descriptor: Spike glycoprotein
Authors:Caffrey, M, Hakansson-McReynolds, S, Jiang, S.
Deposit date:2006-02-06
Release date:2006-03-07
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the severe acute respiratory syndrome-coronavirus heptad repeat 2 domain in the prefusion state
J.Biol.Chem., 281, 2006
4O9R
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BU of 4o9r by Molmil
Human Smoothened Receptor structure in complex with cyclopamine
Descriptor: Cyclopamine, Smoothened homolog/Soluble cytochrome b562 chimeric protein
Authors:Wang, C, Weierstall, U, James, D, White, T.A, Wang, D, Liu, W, Spence, J.C.H, Doak, R.B, Nelson, G, Fromme, P, Fromme, R, Grotjohann, I, Kupitz, C, Zatsepin, N.A, Liu, H, Basu, S, Wacker, D, Han, G.W, Katritch, V, Boutet, S, Messerschmidt, M, Willams, G.J, Koglin, J.E, Seibert, M.M, Klinker, M, Gati, C, Shoeman, R.L, Barty, A, Chapman, H.N, Kirian, R.A, Beyerlein, K.R, Stevens, R.C, Li, D, Shah, S.T.A, Howe, N, Caffrey, M, Cherezov, V, GPCR Network (GPCR)
Deposit date:2014-01-02
Release date:2014-03-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.204 Å)
Cite:Lipidic cubic phase injector facilitates membrane protein serial femtosecond crystallography.
Nat Commun, 5, 2014
6VMZ
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BU of 6vmz by Molmil
Crystal Structure of a H5N1 influenza virus hemagglutinin with CBS1117
Descriptor: 2,6-dichloro-N-[1-(propan-2-yl)piperidin-4-yl]benzamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
Authors:Antanasijevic, A, Durst, M.A, Lavie, A, Caffrey, M.
Deposit date:2020-01-28
Release date:2020-07-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of avian influenza hemagglutinin in complex with a small molecule entry inhibitor.
Life Sci Alliance, 3, 2020
5N6H
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BU of 5n6h by Molmil
Structure of the membrane integral lipoprotein N-acyltransferase Lnt from E. coli
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Apolipoprotein N-acyltransferase, GLYCEROL
Authors:Huang, C.-Y, Boland, C, Howe, N, Wiktor, M, Vogeley, L, Weichert, D, Bailey, J, Olieric, V, Wang, M, Caffrey, M.
Deposit date:2017-02-15
Release date:2017-07-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural insights into the mechanism of the membrane integral N-acyltransferase step in bacterial lipoprotein synthesis.
Nat Commun, 8, 2017
5N6M
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BU of 5n6m by Molmil
Structure of the membrane integral lipoprotein N-acyltransferase Lnt from P. aeruginosa
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Apolipoprotein N-acyltransferase, CITRATE ANION, ...
Authors:Huang, C.-Y, Boland, C, Howe, N, Wiktor, M, Vogeley, L, Weichert, D, Bailey, J, Olieric, V, Wang, M, Caffrey, M.
Deposit date:2017-02-15
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural insights into the mechanism of the membrane integral N-acyltransferase step in bacterial lipoprotein synthesis.
Nat Commun, 8, 2017
4UXZ
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BU of 4uxz by Molmil
Structure of delta7-DgkA-syn in 7.9 MAG to 2.18 angstrom resolution
Descriptor: (2R)-2,3-dihydroxypropyl (7Z)-hexadec-7-enoate, (2S)-2,3-dihydroxypropyl (7Z)-hexadec-7-enoate, ACETATE ION, ...
Authors:Li, D, Howe, N, Caffrey, M.
Deposit date:2014-08-27
Release date:2015-09-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Ternary Structure Reveals Mechanism of a Membrane Diacylglycerol Kinase.
Nat.Commun., 6, 2015
2NPL
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BU of 2npl by Molmil
NMR Structure of CARD d2 Domain
Descriptor: Coxsackievirus and Adenovirus Receptor
Authors:Jiang, S, Caffrey, M.
Deposit date:2006-10-27
Release date:2007-03-13
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Solution structure of the coxsackievirus and adenovirus receptor domain 2
Protein Sci., 16, 2007
4WAB
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BU of 4wab by Molmil
Crystal structure of mPGES1 solved by native-SAD phasing
Descriptor: 2-[[2,6-bis(chloranyl)-3-[(2,2-dimethylpropanoylamino)methyl]phenyl]amino]-1-methyl-6-(2-methyl-2-oxidanyl-propoxy)-N-[2,2,2-tris(fluoranyl)ethyl]benzimidazole-5-carboxamide, GLUTATHIONE, Prostaglandin E synthase,Leukotriene C4 synthase
Authors:Weinert, T, Li, D, Howe, N, Caffrey, M, Wang, M.
Deposit date:2014-08-29
Release date:2014-12-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.704 Å)
Cite:Fast native-SAD phasing for routine macromolecular structure determination.
Nat.Methods, 12, 2015
9EMZ
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BU of 9emz by Molmil
13C/15N-labelled Integral Membrane Enzyme LspA in the Lipid Cubic Phase
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Globomycin, Lipoprotein signal peptidase
Authors:Bailey, J, Boland, C, Caffrey, M, Huang, C.-Y, Gawrisch, K, Kooshapur, H, Ramberg, K.O, Soubias, O, Wiktor, M.
Deposit date:2024-03-12
Release date:2025-03-26
Last modified:2025-04-02
Method:X-RAY DIFFRACTION (3 Å)
Cite:Solid-State NMR of Membrane Peptides and Proteins in the Lipid Cubic Phase.
Biophys.J., 2025
1C2N
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BU of 1c2n by Molmil
CYTOCHROME C2, NMR, 20 STRUCTURES
Descriptor: CYTOCHROME C2, HEME C
Authors:Cordier, F, Caffrey, M.S, Brutscher, B, Cusanovich, M.A, Marion, D, Blackledge, M.
Deposit date:1998-04-27
Release date:1999-03-23
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Solution structure, rotational diffusion anisotropy and local backbone dynamics of Rhodobacter capsulatus cytochrome c2.
J.Mol.Biol., 281, 1998
2YEV
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BU of 2yev by Molmil
Structure of caa3-type cytochrome oxidase
Descriptor: (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15-METHYLHEXADECANOYL)OXY]METHYL}-4-OXIDO-7-OXO-3,5-DIOXA-8-AZA-4-PHOSPHAHEPTACOS-1-YL 15-METHYLHEXADECANOATE, (2R)-2,3-DIHYDROXYPROPYL (7Z)-TETRADEC-7-ENOATE, (2R)-3-HYDROXYPROPANE-1,2-DIYL DIHEXADECANOATE, ...
Authors:Lyons, J.A, Aragao, D, Soulimane, T, Caffrey, M.
Deposit date:2011-03-31
Release date:2012-05-23
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural Insights Into Electron Transfer in Caa3-Type Cytochrome Oxidases.
Nature, 487, 2012
2Y6N
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BU of 2y6n by Molmil
STRUCTURE OF LINEAR GRAMICIDIN D OBTAINED USING TYPE I CRYSTALS GROWN IN A 8.8 MONOACYLGLYCEROL LIPID CUBIC PHASE.
Descriptor: O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL, POLYETHYLENE GLYCOL (N=34), VAL-GRAMICIDIN A
Authors:Hoefer, N, Aragao, D, Caffrey, M.
Deposit date:2011-01-25
Release date:2011-05-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Membrane Protein Crystallization in Lipidic Mesophases. Hosting Lipid Effects on the Crystallization and Structure of a Transmembrane Peptide
Cryst.Growth Des., 11, 2011
5JKI
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BU of 5jki by Molmil
Crystal structure of the first transmembrane PAP2 type phosphatidylglycerolphosphate phosphatase from Bacillus subtilis
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative lipid phosphate phosphatase YodM, TUNGSTATE(VI)ION, ...
Authors:El Ghachi, M, Howe, N, Lampion, A, Delbrassine, F, Vogeley, L, Caffrey, M, Sauvage, E, Auger, R, Guiseppe, A, Roure, S, Perlier, S, Mengin-lecreulx, D, Foglino, M, Touze, T.
Deposit date:2016-04-26
Release date:2017-02-22
Last modified:2017-05-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure and biochemical characterization of the transmembrane PAP2 type phosphatidylglycerol phosphate phosphatase from Bacillus subtilis.
Cell. Mol. Life Sci., 74, 2017
6PCX
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BU of 6pcx by Molmil
Crystal Structure of a H5N1 influenza virus hemagglutinin at pH 6.0
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Hemagglutinin, ...
Authors:Antanasijevic, A, Durst, M.A, Lavie, A, Caffrey, M.
Deposit date:2019-06-18
Release date:2019-11-13
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Identification of a pH sensor in Influenza hemagglutinin using X-ray crystallography.
J.Struct.Biol., 209, 2020
6PD6
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BU of 6pd6 by Molmil
Crystal Structure of a H5N1 influenza virus hemagglutinin at pH 7.0
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Hemagglutinin, ...
Authors:Antanasijevic, A, Durst, M.A, Lavie, A, Caffrey, M.
Deposit date:2019-06-18
Release date:2019-11-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Identification of a pH sensor in Influenza hemagglutinin using X-ray crystallography.
J.Struct.Biol., 209, 2020
6PD5
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BU of 6pd5 by Molmil
Crystal Structure of a H5N1 influenza virus hemagglutinin at pH 6.5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Hemagglutinin, ...
Authors:Antanasijevic, A, Durst, M.A, Lavie, A, Caffrey, M.
Deposit date:2019-06-18
Release date:2019-11-13
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Identification of a pH sensor in Influenza hemagglutinin using X-ray crystallography.
J.Struct.Biol., 209, 2020
6PD3
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BU of 6pd3 by Molmil
Crystal Structure of a H5N1 influenza virus hemagglutinin at pH 5.5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Hemagglutinin, ...
Authors:Antanasijevic, A, Durst, M.A, Lavie, A, Caffrey, M.
Deposit date:2019-06-18
Release date:2019-11-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Identification of a pH sensor in Influenza hemagglutinin using X-ray crystallography.
J.Struct.Biol., 209, 2020
4U9L
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BU of 4u9l by Molmil
Structure of a membrane protein
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MAGNESIUM ION, Magnesium transporter MgtE
Authors:Takeda, H, Hattori, M, Nishizawa, T, Yamashita, K, Shah, S.T.A, Caffrey, M, Maturana, A.D, Ishitani, R, Nureki, O.
Deposit date:2014-08-06
Release date:2014-12-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for ion selectivity revealed by high-resolution crystal structure of Mg(2+) channel MgtE
Nat Commun, 5, 2014

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