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PDB: 137 results

2EZP
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BU of 2ezp by Molmil
SOLUTION NMR STRUCTURE OF ECTODOMAIN OF SIV GP41, MODELS 1-10 OF AN ENSEMBLE OF 40 SIMULATED ANNEALING STRUCTURES
Descriptor: GP41
Authors:Caffrey, M, Gronenborn, A.M, Clore, G.M.
Deposit date:1998-05-20
Release date:1998-10-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the 44 kDa ectodomain of SIV gp41.
EMBO J., 17, 1998
2EZS
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BU of 2ezs by Molmil
SOLUTION NMR STRUCTURE OF ECTODOMAIN OF SIV GP41, MODELS 31-40 OF AN ENSEMBLE OF 40 SIMULATED ANNEALING STRUCTURES
Descriptor: GP41
Authors:Caffrey, M, Gronenborn, A.M, Clore, G.M.
Deposit date:1998-05-20
Release date:1998-10-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the 44 kDa ectodomain of SIV gp41.
EMBO J., 17, 1998
2EZO
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BU of 2ezo by Molmil
SOLUTION NMR STRUCTURE OF ECTODOMAIN OF SIV GP41, RESTRAINED REGULARIZED MEAN STRUCTURE
Descriptor: GP41
Authors:Caffrey, M, Gronenborn, A.M, Clore, G.M.
Deposit date:1998-05-20
Release date:1998-10-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the 44 kDa ectodomain of SIV gp41.
EMBO J., 17, 1998
2EZR
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BU of 2ezr by Molmil
SOLUTION NMR STRUCTURE OF ECTODOMAIN OF SIV GP41, MODELS 21-30 OF AN ENSEMBLE OF 40 SIMULATED ANNEALING STRUCTURES
Descriptor: GP41
Authors:Caffrey, M, Gronenborn, A.M, Clore, G.M.
Deposit date:1998-05-20
Release date:1998-10-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the 44 kDa ectodomain of SIV gp41.
EMBO J., 17, 1998
2EZQ
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BU of 2ezq by Molmil
SOLUTION NMR STRUCTURE OF ECTODOMAIN OF SIV GP41, MODELS 11-20 OF AN ENSEMBLE OF 40 SIMULATED ANNEALING STRUCTURES
Descriptor: GP41
Authors:Caffrey, M, Gronenborn, A.M, Clore, G.M.
Deposit date:1998-05-20
Release date:1998-10-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the 44 kDa ectodomain of SIV gp41.
EMBO J., 17, 1998
2GUF
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BU of 2guf by Molmil
In meso crystal structure of the cobalamin transporter, BtuB
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, FORMIC ACID, Vitamin B12 transporter btuB, ...
Authors:Caffrey, M, Cherezov, V, Yamashita, E, Cramer, W.A.
Deposit date:2006-04-29
Release date:2006-12-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:In Meso Structure of the Cobalamin Transporter, BtuB, at 1.95 A Resolution.
J.Mol.Biol., 364, 2006
2FXP
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BU of 2fxp by Molmil
Solution Structure of the SARS-Coronavirus HR2 Domain
Descriptor: Spike glycoprotein
Authors:Caffrey, M, Hakansson-McReynolds, S, Jiang, S.
Deposit date:2006-02-06
Release date:2006-03-07
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the severe acute respiratory syndrome-coronavirus heptad repeat 2 domain in the prefusion state
J.Biol.Chem., 281, 2006
1MEQ
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BU of 1meq by Molmil
HIV gp120 C5
Descriptor: Exterior Membrane Glycoprotein (GP120)
Authors:Caffrey, M, Jacobs, A, Guilhaudis, L.
Deposit date:2002-08-08
Release date:2002-12-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of the HIV gp120 C5 Domain
Eur.J.Biochem., 269, 2002
4UVM
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BU of 4uvm by Molmil
In meso crystal structure of the POT family transporter PepTSo
Descriptor: (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, GLUTATHIONE UPTAKE TRANSPORTER
Authors:Lyons, J.A, Solcan, N, Caffrey, M, Newstead, S.
Deposit date:2014-08-07
Release date:2015-02-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Gating Topology of the Proton-Coupled Oligopeptide Symporters.
Structure, 23, 2015
4UXZ
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BU of 4uxz by Molmil
Structure of delta7-DgkA-syn in 7.9 MAG to 2.18 angstrom resolution
Descriptor: (2R)-2,3-dihydroxypropyl (7Z)-hexadec-7-enoate, (2S)-2,3-dihydroxypropyl (7Z)-hexadec-7-enoate, ACETATE ION, ...
Authors:Li, D, Howe, N, Caffrey, M.
Deposit date:2014-08-27
Release date:2015-09-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Ternary Structure Reveals Mechanism of a Membrane Diacylglycerol Kinase.
Nat.Commun., 6, 2015
5JKI
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BU of 5jki by Molmil
Crystal structure of the first transmembrane PAP2 type phosphatidylglycerolphosphate phosphatase from Bacillus subtilis
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative lipid phosphate phosphatase YodM, TUNGSTATE(VI)ION, ...
Authors:El Ghachi, M, Howe, N, Lampion, A, Delbrassine, F, Vogeley, L, Caffrey, M, Sauvage, E, Auger, R, Guiseppe, A, Roure, S, Perlier, S, Mengin-lecreulx, D, Foglino, M, Touze, T.
Deposit date:2016-04-26
Release date:2017-02-22
Last modified:2017-05-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure and biochemical characterization of the transmembrane PAP2 type phosphatidylglycerol phosphate phosphatase from Bacillus subtilis.
Cell. Mol. Life Sci., 74, 2017
6EI3
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BU of 6ei3 by Molmil
Crystal structure of auto inhibited POT family peptide transporter
Descriptor: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, Proton-dependent oligopeptide transporter family protein
Authors:Newstead, S, Brinth, A, Vogeley, L, Caffrey, M.
Deposit date:2017-09-17
Release date:2017-11-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Proton movement and coupling in the POT family of peptide transporters.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5OON
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BU of 5oon by Molmil
Structure of Undecaprenyl-Pyrophosphate Phosphatase, BacA
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MERCURY (II) ION, ...
Authors:Huang, C.-Y, Olieric, V, Warshamanage, R, Wang, M, Howe, N, Ghachi, M.E.I, Weichert, D, Kerff, F, Stansfeld, P, Touze, T, Caffrey, M.
Deposit date:2017-08-08
Release date:2018-03-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of undecaprenyl-pyrophosphate phosphatase and its role in peptidoglycan biosynthesis.
Nat Commun, 9, 2018
3BYR
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BU of 3byr by Molmil
Mode of Action of a Putative Zinc Transporter CzrB (Zn form)
Descriptor: CzrB protein, ZINC ION
Authors:Cherezov, V, Srinivasan, V, Szebenyi, D.M.E, Caffrey, M.
Deposit date:2008-01-16
Release date:2008-09-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Insights into the Mode of Action of a Putative Zinc Transporter CzrB in Thermus thermophilus
Structure, 16, 2008
3BYP
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BU of 3byp by Molmil
Mode of Action of a Putative Zinc Transporter CzrB
Descriptor: CzrB protein, SULFATE ION
Authors:Cherezov, V, Srinivasan, V, Szebenyi, D.M.E, Caffrey, M.
Deposit date:2008-01-16
Release date:2008-09-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Insights into the Mode of Action of a Putative Zinc Transporter CzrB in Thermus thermophilus
Structure, 16, 2008
8Q2O
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BU of 8q2o by Molmil
Structure of alginate transporter AlgE from P. aeruginosa PAO1 by using Se-MAG for the the lipid cubic phase crystallization
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, Alginate production protein AlgE, ...
Authors:Huang, C.-Y, Boland, C, Kaki, S.S, Wang, M, Olieric, V, Caffrey, M.
Deposit date:2023-08-03
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Se-MAG Is a Convenient Additive for Experimental Phasing and Structure Determination of Membrane Proteins Crystallised by the Lipid Cubic Phase (In Meso) Method
Crystals, 2023
8Q2P
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BU of 8q2p by Molmil
Structure of the membrane integral lipoprotein N-acyltransferase Lnt from E. coli by using Se-MAG for the the lipid cubic phase crystallization
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, Apolipoprotein N-acyltransferase, ...
Authors:Huang, C.-Y, Boland, C, Kaki, S.S, Wang, M, Olieric, V, Caffrey, M.
Deposit date:2023-08-03
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Se-MAG Is a Convenient Additive for Experimental Phasing and Structure Determination of Membrane Proteins Crystallised by the Lipid Cubic Phase (In Meso) Method
Crystals, 2023
6VMZ
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BU of 6vmz by Molmil
Crystal Structure of a H5N1 influenza virus hemagglutinin with CBS1117
Descriptor: 2,6-dichloro-N-[1-(propan-2-yl)piperidin-4-yl]benzamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
Authors:Antanasijevic, A, Durst, M.A, Lavie, A, Caffrey, M.
Deposit date:2020-01-28
Release date:2020-07-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of avian influenza hemagglutinin in complex with a small molecule entry inhibitor.
Life Sci Alliance, 3, 2020
3ZE3
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BU of 3ze3 by Molmil
Crystal structure of the integral membrane diacylglycerol kinase - delta7
Descriptor: (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, ACETATE ION, ...
Authors:Li, D, Pye, V.E, Lyons, J.A, Vogeley, L, Aragao, D, Caffrey, M.
Deposit date:2012-12-03
Release date:2013-05-22
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal Structure of the Integral Membrane Diacylglycerol Kinase.
Nature, 497, 2013
5V54
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BU of 5v54 by Molmil
Crystal structure of 5-HT1B receptor in complex with methiothepin
Descriptor: 1-methyl-4-[(5~{S})-3-methylsulfanyl-5,6-dihydrobenzo[b][1]benzothiepin-5-yl]piperazine, 5-hydroxytryptamine receptor 1B,OB-1 fused 5-HT1b receptor,5-hydroxytryptamine receptor 1B
Authors:Yin, W.C, Zhou, X.E, Yang, D, de Waal, P, Wang, M.T, Dai, A, Cai, X, Huang, C.Y, Liu, P, Yin, Y, Liu, B, Caffrey, M, Melcher, K, Xu, Y, Wang, M.W, Xu, H.E, Jiang, Y.
Deposit date:2017-03-13
Release date:2018-02-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:A common antagonistic mechanism for class A GPCRs revealed by the structure of the human 5-HT1B serotonin receptor bound to an antagonist
Cell Discov, 2018
3ZE5
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BU of 3ze5 by Molmil
Crystal structure of the integral membrane diacylglycerol kinase - delta4
Descriptor: DIACYLGLYCEROL KINASE
Authors:Li, D, Vogeley, L, Pye, V.E, Lyons, J.A, Aragao, D, Caffrey, M.
Deposit date:2012-12-03
Release date:2013-05-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.101 Å)
Cite:Crystal Structure of the Integral Membrane Diacylglycerol Kinase.
Nature, 497, 2013
3ZE4
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BU of 3ze4 by Molmil
Crystal structure of the integral membrane diacylglycerol kinase - wild-type
Descriptor: DIACYLGLYCEROL KINASE
Authors:Li, D, Lyons, J.A, Pye, V.E, Vogeley, L, Aragao, D, Caffrey, M.
Deposit date:2012-12-03
Release date:2013-05-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.702 Å)
Cite:Crystal Structure of the Integral Membrane Diacylglycerol Kinase.
Nature, 497, 2013
2VDF
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BU of 2vdf by Molmil
Structure of the OpcA adhesion from Neisseria meningitidis determined by crystallization from the cubic mesophase
Descriptor: N-OCTANE, OUTER MEMBRANE PROTEIN, SULFATE ION
Authors:Cherezov, V, Liu, W, Derrick, J.P, Luan, B, Aksimentiev, A, Katritch, V, Caffrey, M.
Deposit date:2007-10-05
Release date:2007-10-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:In meso crystal structure and docking simulations suggest an alternative proteoglycan binding site in the OpcA outer membrane adhesin.
Proteins, 71, 2008
1C2N
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BU of 1c2n by Molmil
CYTOCHROME C2, NMR, 20 STRUCTURES
Descriptor: CYTOCHROME C2, HEME C
Authors:Cordier, F, Caffrey, M.S, Brutscher, B, Cusanovich, M.A, Marion, D, Blackledge, M.
Deposit date:1998-04-27
Release date:1999-03-23
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Solution structure, rotational diffusion anisotropy and local backbone dynamics of Rhodobacter capsulatus cytochrome c2.
J.Mol.Biol., 281, 1998
4ZWJ
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BU of 4zwj by Molmil
Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser
Descriptor: Chimera protein of human Rhodopsin, mouse S-arrestin, and T4 Endolysin
Authors:Kang, Y, Zhou, X.E, Gao, X, He, Y, Liu, W, Ishchenko, A, Barty, A, White, T.A, Yefanov, O, Han, G.W, Xu, Q, de Waal, P.W, Ke, J, Tan, M.H.E, Zhang, C, Moeller, A, West, G.M, Pascal, B, Eps, N.V, Caro, L.N, Vishnivetskiy, S.A, Lee, R.J, Suino-Powell, K.M, Gu, X, Pal, K, Ma, J, Zhi, X, Boutet, S, Williams, G.J, Messerschmidt, M, Gati, C, Zatsepin, N.A, Wang, D, James, D, Basu, S, Roy-Chowdhury, S, Conrad, C, Coe, J, Liu, H, Lisova, S, Kupitz, C, Grotjohann, I, Fromme, R, Jiang, Y, Tan, M, Yang, H, Li, J, Wang, M, Zheng, Z, Li, D, Howe, N, Zhao, Y, Standfuss, J, Diederichs, K, Dong, Y, Potter, C.S, Carragher, B, Caffrey, M, Jiang, H, Chapman, H.N, Spence, J.C.H, Fromme, P, Weierstall, U, Ernst, O.P, Katritch, V, Gurevich, V.V, Griffin, P.R, Hubbell, W.L, Stevens, R.C, Cherezov, V, Melcher, K, Xu, H.E, GPCR Network (GPCR)
Deposit date:2015-05-19
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.302 Å)
Cite:Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser.
Nature, 523, 2015

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