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PDB: 2226 results

6L9H
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The Human Telomeric Nucleosome Displays Distinct Structural and Dynamic Properties
Descriptor: Histone H2A type 1-B/E, Histone H2B type 1-K, Histone H3.1, ...
Authors:Soman, A, Liew, C.W, Teo, H.L, Berezhnoy, N, Korolev, N, Rhodes, D, Nordenskiold, L.
Deposit date:2019-11-10
Release date:2020-04-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The human telomeric nucleosome displays distinct structural and dynamic properties.
Nucleic Acids Res., 48, 2020
6LX0
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Structure of Leptospira santarosai serovar shermani LRR protein LSS11580
Descriptor: Membrane protein
Authors:Chu, C.H, Hsu, S.H, Yang, C.W, Sun, Y.J.
Deposit date:2020-02-10
Release date:2020-12-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Crystal structure of Leptospira leucine-rich repeat 20 reveals a novel E-cadherin binding protein to induce NGAL expression in HK2 cells.
Biochem.J., 477, 2020
6LVP
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Enoyl-CoA hydratase (HyECH) from Hymenobacter sp. PAMC 26628
Descriptor: Enoyl-CoA hydratase
Authors:Hwang, J.S, Jung, C, Lee, C.W, Lee, J.H.
Deposit date:2020-02-04
Release date:2020-04-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structural and sequence comparisons of bacterial enoyl-CoA isomerase and enoyl-CoA hydratase.
J.Microbiol, 58, 2020
6UGJ
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Crystal structure of a fragment of E. coli tRNA(Asp) consisting of its acceptor stem/T stem-loop. Short unit cell.
Descriptor: DIPHOSPHATE, SULFATE ION, URACIL, ...
Authors:Chan, C.W, Mondragon, A.
Deposit date:2019-09-26
Release date:2020-01-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of an unmodified bacterial tRNA reveal intrinsic structural flexibility and plasticity as general properties of unbound tRNAs.
Rna, 26, 2020
6UGG
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Structure of unmodified E. coli tRNA(Asp)
Descriptor: tRNAasp
Authors:Chan, C.W, Mondragon, A.
Deposit date:2019-09-26
Release date:2020-01-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures of an unmodified bacterial tRNA reveal intrinsic structural flexibility and plasticity as general properties of unbound tRNAs.
Rna, 26, 2020
6UGI
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Crystal structure of a fragment of E. coli tRNA(Asp) consisting of its acceptor stem/T stem-loop. Long unit cell.
Descriptor: SULFATE ION, tRNA(Asp) acceptor stem/T stem-loop
Authors:Chan, C.W, Mondragon, A.
Deposit date:2019-09-26
Release date:2020-01-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structures of an unmodified bacterial tRNA reveal intrinsic structural flexibility and plasticity as general properties of unbound tRNAs.
Rna, 26, 2020
6URF
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Malic enzyme from Mycobacterium tuberculosis
Descriptor: GLYCEROL, NAD-dependent malic enzyme
Authors:Cuthbert, B.J, Burley, K.H, Goulding, C.W, Mathews, E.I, Beste, D.J.
Deposit date:2019-10-23
Release date:2020-10-28
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural and Molecular Dynamics of Mycobacterium tuberculosis Malic Enzyme, a Potential Anti-TB Drug Target.
Acs Infect Dis., 7, 2021
6VEK
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BU of 6vek by Molmil
Contact-dependent growth inhibition toxin-immunity protein complex from from E. coli 3006, full-length
Descriptor: contact-dependent immunity protein CdiI, contact-dependent toxin CdiA
Authors:Michalska, K, Stols, L, Eschenfeldt, W, Hayes, C.S, Goulding, C.W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes (UC4CDI), Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-01-02
Release date:2021-01-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Contact-dependent growth inhibition toxin-immunity protein complex from from E. coli 3006, full-length
To Be Published
8PX2
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C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH 1,3-dimethyl-5-(1-((tetrahydro-2H-pyran-4-yl)methyl)-1H-benzo[d]imidazol-2-yl)pyridin-2(1H)-one
Descriptor: 1,3-dimethyl-5-[1-(oxan-4-ylmethyl)benzimidazol-2-yl]pyridin-2-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Bromodomain-containing protein 2
Authors:Chung, C.W.
Deposit date:2023-07-22
Release date:2023-10-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.622 Å)
Cite:Structure-Guided Design of a Domain-Selective Bromodomain and Extra Terminal N-Terminal Bromodomain Chemical Probe.
J.Med.Chem., 66, 2023
8PXM
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N-TERMINAL BROMODOMAIN OF HUMAN BRD4 WITH (1R,1'R)-7,7'-(pentane-1,5-diylbis(oxy))bis(1,3-dimethyl-1,3-dihydro-2H-benzo[d]azepin-2-one)
Descriptor: (1R)-7-[5-[[(1R)-1,3-dimethyl-2-oxidanylidene-1H-3-benzazepin-7-yl]oxy]pentoxy]-1,3-dimethyl-1H-3-benzazepin-2-one, 1,2-ETHANEDIOL, Bromodomain-containing protein 4
Authors:Chung, C.W.
Deposit date:2023-07-23
Release date:2023-10-04
Method:X-RAY DIFFRACTION (2.378 Å)
Cite:Design and Characterization of 1,3-Dihydro-2 H -benzo[ d ]azepin-2-ones as Rule-of-5 Compliant Bivalent BET Inhibitors.
Acs Med.Chem.Lett., 14, 2023
8PX8
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BU of 8px8 by Molmil
C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH (S)-5-(1-((1-acetylpiperidin-3-yl)methyl)-5-bromo-1H-benzo[d]imidazol-2-yl)-1,3-dimethylpyridin-2(1H)-one
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5-[5-bromanyl-1-[[(3~{S})-1-ethanoylpiperidin-3-yl]methyl]benzimidazol-2-yl]-1,3-dimethyl-pyridin-2-one, ...
Authors:Chung, C.W.
Deposit date:2023-07-22
Release date:2023-10-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.603 Å)
Cite:Structure-Guided Design of a Domain-Selective Bromodomain and Extra Terminal N-Terminal Bromodomain Chemical Probe.
J.Med.Chem., 66, 2023
6VMY
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BU of 6vmy by Molmil
Structure of the B. subtilis cobalamin riboswitch
Descriptor: Adenosylcobalamin, B. subtilis cobalamin riboswitch, COBALT HEXAMMINE(III), ...
Authors:Chan, C.W, Mondragon, A.
Deposit date:2020-01-28
Release date:2020-06-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Crystal structure of an atypical cobalamin riboswitch reveals RNA structural adaptability as basis for promiscuous ligand binding.
Nucleic Acids Res., 48, 2020
8PVQ
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Crystal Structure of Human PTX3 C-terminal domain
Descriptor: Pentraxin-related protein PTX3
Authors:Levy, C.W.
Deposit date:2023-07-18
Release date:2024-07-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Pentraxin 3 mediated crosslinking of heavy chain hyaluronan complexes: new insights from structural and biophysical studies
To Be Published
3UPU
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BU of 3upu by Molmil
Crystal structure of the T4 Phage SF1B Helicase Dda
Descriptor: 5'-D(*TP*TP*TP*TP*TP*TP*TP*T)-3', ATP-dependent DNA helicase dda
Authors:He, X, Yun, M.K, Pemble IV, C.W, Kreuzer, K.N, Raney, K.D, White, S.W.
Deposit date:2011-11-18
Release date:2012-06-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.299 Å)
Cite:The T4 Phage SF1B Helicase Dda Is Structurally Optimized to Perform DNA Strand Separation.
Structure, 20, 2012
8QHE
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BU of 8qhe by Molmil
Crystal structure IR-09
Descriptor: 6-phosphogluconate dehydrogenase NADP-binding domain-containing protein, MAGNESIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Levy, C.W.
Deposit date:2023-09-07
Release date:2023-10-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Biocatalysis in Drug Design: Engineered Reductive Aminases (RedAms) Are Used to Access Chiral Building Blocks with Multiple Stereocenters.
J.Am.Chem.Soc., 145, 2023
3UNO
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BU of 3uno by Molmil
Mycobacterium tuberculosis ferritin homolog, BfrB
Descriptor: Probable bacterioferritin BfrB
Authors:McMath, L.M, Contreras, H, Goulding, C.W, TB Structural Genomics Consortium (TBSGC)
Deposit date:2011-11-16
Release date:2012-11-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Mycobacterium tuberculosis ferritin homolog, BfrB
To be Published
1E95
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BU of 1e95 by Molmil
Solution structure of the pseudoknot of SRV-1 RNA, involved in ribosomal frameshifting
Descriptor: RNA (5'-(*GP*CP*GP*GP*CP*CP*AP*GP*CP*UP*CP* CP*AP*GP*GP*CP*CP*GP*CP*CP*AP*AP*AP*CP* AP*AP*UP*AP*UP*GP*GP*AP*GP*CP*AP*C)-3')
Authors:Michiels, P.J.A, Versleyen, A, Pleij, C.W.A, Hilbers, C.W, Heus, H.A.
Deposit date:2000-10-09
Release date:2001-08-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of the Pseudoknot of Srv-1 RNA, Involved in Ribosomal Frameshifting
J.Mol.Biol., 310, 2001
7AEA
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BU of 7aea by Molmil
Cryo-EM structure of human RNA Polymerase III elongation complex 2
Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
Authors:Girbig, M, Misiaszek, A.D, Vorlaender, M.K, Mueller, C.W.
Deposit date:2020-09-17
Release date:2021-02-03
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structures of human RNA polymerase III in its unbound and transcribing states.
Nat.Struct.Mol.Biol., 28, 2021
8HGJ
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BU of 8hgj by Molmil
Toxascaris leonina galectin (Tl-gal) and Human T-cell immunoglobulin mucin-3 (Tim3) complex
Descriptor: Galectin, Hepatitis A virus cellular receptor 2
Authors:Han, C.W, Jang, S.B.
Deposit date:2022-11-14
Release date:2023-11-22
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (4.82 Å)
Cite:Toxascaris leonina galectin (Tl-gal) and Human T-cell immunoglobulin mucin-3 (Tim3) complex
To Be Published
7AE1
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Cryo-EM structure of human RNA Polymerase III elongation complex 1
Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
Authors:Girbig, M, Misiaszek, A.D, Vorlaender, M.K, Mueller, C.W.
Deposit date:2020-09-17
Release date:2021-02-03
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structures of human RNA polymerase III in its unbound and transcribing states.
Nat.Struct.Mol.Biol., 28, 2021
8I9M
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BU of 8i9m by Molmil
The RAGE and HMGB1 complex
Descriptor: Advanced glycosylation end product-specific receptor, High mobility group protein B1
Authors:Han, C.W, Kim, H.J.
Deposit date:2023-02-07
Release date:2024-02-14
Method:ELECTRON MICROSCOPY (5.19 Å)
Cite:The RAGE and HMGB1 complex
To Be Published
7AE3
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Cryo-EM structure of human RNA Polymerase III elongation complex 3
Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
Authors:Girbig, M, Misiaszek, A.D, Vorlaender, M.K, Mueller, C.W.
Deposit date:2020-09-17
Release date:2021-02-03
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures of human RNA polymerase III in its unbound and transcribing states.
Nat.Struct.Mol.Biol., 28, 2021
8I9J
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BU of 8i9j by Molmil
The PKR and E3L complex
Descriptor: Interferon-induced, double-stranded RNA-activated protein kinase, RNA-binding protein E3
Authors:Han, C.W, Kim, H.J.
Deposit date:2023-02-07
Release date:2023-06-28
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (6.39 Å)
Cite:Structural study of novel vaccinia virus E3L and dsRNA-dependent protein kinase complex.
Biochem.Biophys.Res.Commun., 665, 2023
7A6H
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Cryo-EM structure of human apo RNA Polymerase III
Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
Authors:Girbig, M, Misiaszek, A.D, Vorlaender, M.K, Mueller, C.W.
Deposit date:2020-08-25
Release date:2021-02-03
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of human RNA polymerase III in its unbound and transcribing states.
Nat.Struct.Mol.Biol., 28, 2021
8G6H
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H2BK120ub+H3K79me2-modified nucleosome ubiquitin position 6
Descriptor: 601 DNA (185-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Hicks, C.W, Wolberger, C, Keogh, M.
Deposit date:2023-02-15
Release date:2024-02-21
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.
Nucleic Acids Res., 52, 2024

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PDB entries from 2024-10-30

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