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PDB: 37 results

3BQJ
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BU of 3bqj by Molmil
VA387 polypeptide
Descriptor: va387 polypeptide
Authors:Bu, W, Mamedova, A, Tan, M, Jiang, J, Hegde, R.
Deposit date:2007-12-20
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for the receptor binding specificity of Norwalk virus.
J.Virol., 82, 2008
4DE6
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BU of 4de6 by Molmil
Horse spleen apo-ferritin complex with arachidonic acid
Descriptor: ARACHIDONIC ACID, CADMIUM ION, Ferritin light chain, ...
Authors:Bu, W, Liu, R, Dmochowski, I.J, Loll, P.J, Eckenhoff, R.G.
Deposit date:2012-01-19
Release date:2012-03-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Ferritin couples iron and fatty acid metabolism.
Faseb J., 26, 2012
1TGY
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BU of 1tgy by Molmil
Structure of E. coli Uridine Phosphorylase complexed with uracil and ribose 1-phosphate
Descriptor: 1-O-phosphono-alpha-D-ribofuranose, POTASSIUM ION, URACIL, ...
Authors:Bu, W, Settembre, E.C, Sanders, J.M, Begley, T.P, Ealick, S.E.
Deposit date:2004-05-31
Release date:2005-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of E. coli Uridine Phosphorylase
To be Published, 2004
1U1G
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BU of 1u1g by Molmil
Structure of E. coli uridine phosphorylase complexed to 5-(m-(benzyloxy)benzyl)barbituric acid (BBBA)
Descriptor: 1-((2-HYDROXYETHOXY)METHYL)-5-(3-(BENZYLOXY)BENZYL)-6-HYDROXYPYRIMIDINE-2,4(1H,3H)-DIONE, POTASSIUM ION, Uridine phosphorylase
Authors:Bu, W, Settembre, E.C, Ealick, S.E.
Deposit date:2004-07-15
Release date:2005-07-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines.
Acta Crystallogr.,Sect.D, 61, 2005
1U1D
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BU of 1u1d by Molmil
Structure of e. coli uridine phosphorylase complexed to 5-(phenylthio)acyclouridine (ptau)
Descriptor: 1-((2-HYDROXYETHOXY)METHYL)-5-(PHENYLTHIO)PYRIMIDINE-2,4(1H,3H)-DIONE, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Bu, W, Settembre, E.C, Ealick, S.E.
Deposit date:2004-07-15
Release date:2005-07-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines.
Acta Crystallogr.,Sect.D, 61, 2005
1U1E
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BU of 1u1e by Molmil
Structure of e. coli uridine phosphorylase complexed to 5(phenylseleno)acyclouridine (PSAU)
Descriptor: 1-((2-HYDROXYETHOXY)METHYL)-5-(PHENYLSELANYL)PYRIMIDINE-2,4(1H,3H)-DIONE, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Bu, W, Settembre, E.C, Ealick, S.E.
Deposit date:2004-07-15
Release date:2005-07-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines.
Acta Crystallogr.,Sect.D, 61, 2005
1U1C
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BU of 1u1c by Molmil
Structure of E. coli uridine phosphorylase complexed to 5-benzylacyclouridine (BAU)
Descriptor: 1-((2-HYDROXYETHOXY)METHYL)-5-BENZYLPYRIMIDINE-2,4(1H,3H)-DIONE, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Bu, W, Settembre, E.C, Ealick, S.E.
Deposit date:2004-07-15
Release date:2005-07-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines.
Acta Crystallogr.,Sect.D, 61, 2005
1TGV
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BU of 1tgv by Molmil
Structure of E. coli Uridine Phosphorylase complexed with 5-Fluorouridine and sulfate
Descriptor: 5-FLUOROURIDINE, POTASSIUM ION, SULFATE ION, ...
Authors:Bu, W, Settembre, E.C, Sanders, J.M, Begley, T.P, Ealick, S.E.
Deposit date:2004-05-31
Release date:2005-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of E. coli Uridine Phosphorylase
To be Published, 2004
1U1F
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BU of 1u1f by Molmil
Structure of e. coli uridine phosphorylase complexed to 5-(m-(benzyloxy)benzyl)acyclouridine (BBAU)
Descriptor: 1-((2-HYDROXYETHOXY)METHYL)-5-(3-(BENZYLOXY)BENZYL)PYRIMIDINE-2,4(1H,3H)-DIONE, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Bu, W, Settembre, E.C, Ealick, S.E.
Deposit date:2004-07-15
Release date:2005-07-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines.
Acta Crystallogr.,Sect.D, 61, 2005
8TOO
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BU of 8too by Molmil
Crystal structure of Epstein-Barr virus gp42 in complex with antibody 4C12
Descriptor: 4C12 heavy chain, 4C12 light chain, Glycoprotein 42
Authors:Bu, W, Kumar, A, Board, N, Kim, J, Dowdell, K, Zhang, S, Lei, Y, Hostal, A, Krogmann, T, Wang, Y, Pittaluga, S, Marcotrigiano, J, Cohen, J.I.
Deposit date:2023-08-03
Release date:2024-03-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Epstein-Barr virus gp42 antibodies reveal sites of vulnerability for receptor binding and fusion to B cells.
Immunity, 57, 2024
8TNN
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BU of 8tnn by Molmil
Crystal structure of Epstein-Barr virus gH/gL/gp42 in complex with gp42 antibody A10
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, A10 heavy chain, A10 light chain, ...
Authors:Bu, W, Kumar, A, Board, N, Kim, J, Dowdell, K, Zhang, S, Lei, Y, Hostal, A, Krogmann, T, Wang, Y, Pittaluga, S, Marcotrigiano, J, Cohen, J.I.
Deposit date:2023-08-02
Release date:2024-03-27
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.36 Å)
Cite:Epstein-Barr virus gp42 antibodies reveal sites of vulnerability for receptor binding and fusion to B cells.
Immunity, 57, 2024
8TNT
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BU of 8tnt by Molmil
Crystal structure of Epstein-Barr virus gH/gL/gp42 in complex with antibodies F-2-1 and 769C2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 769C2 heavy chain, 769C2 light chain, ...
Authors:Bu, W, Kumar, A, Board, N, Kim, J, Dowdell, K, Zhang, S, Lei, Y, Hostal, A, Krogmann, T, Wang, Y, Pittaluga, S, Marcotrigiano, J, Cohen, J.I.
Deposit date:2023-08-02
Release date:2024-03-27
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Epstein-Barr virus gp42 antibodies reveal sites of vulnerability for receptor binding and fusion to B cells.
Immunity, 57, 2024
7C3M
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BU of 7c3m by Molmil
Structure of FERM protein
Descriptor: Fermitin family homolog 3,Fermitin family homolog 3,Fermitin family homolog 3
Authors:Bu, W, Loh, Z.Y, Jin, S, Basu, S, Ero, R, Park, J.E, Yan, X, Wang, M, Sze, S.K, Tan, S.M, Gao, Y.G.
Deposit date:2020-05-13
Release date:2020-06-03
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural basis of human full-length kindlin-3 homotrimer in an auto-inhibited state.
Plos Biol., 18, 2020
3ZJT
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BU of 3zjt by Molmil
Ternary complex of E.coli leucyl-tRNA synthetase, tRNA(Leu)574 and the benzoxaborole AN3017 in the editing conformation
Descriptor: LEUCYL-TRNA SYNTHETASE, MAGNESIUM ION, TRNALEU5 UAA ISOACCEPTOR
Authors:Cusack, S, Palencia, A, Crepin, T, Hernandez, V, Akama, T, Baker, S.J, Bu, W, Feng, L, Freund, Y.R, Liu, L, Meewan, M, Mohan, M, Mao, W, Rock, F.L, Sexton, H, Sheoran, A, Zhang, Y, Zhang, Y, Zhou, Y, Nieman, J.A, Anugula, M.R, Keramane, E.M, Savariraj, K, Reddy, D.S, Sharma, R, Subedi, R, Singh, R, OLeary, A, Simon, N.L, DeMarsh, P.L, Mushtaq, S, Warner, M, Livermore, D.M, Alley, M.R.K, Plattner, J.J.
Deposit date:2013-01-18
Release date:2013-04-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of a Novel Class of Boron-Based Antibacterials with Activity Against Gram-Negative Bacteria.
Antimicrob.Agents Chemother., 57, 2013
3ZJV
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BU of 3zjv by Molmil
Ternary complex of E .coli leucyl-tRNA synthetase, tRNA(Leu) and the benzoxaborole AN3213 in the editing conformation
Descriptor: LEUCINE--TRNA LIGASE, TRNALEU5 UAA ISOACCEPTOR
Authors:Cusack, S, Palencia, A, Crepin, T, Hernandez, V, Akama, T, Baker, S.J, Bu, W, Feng, L, Freund, Y.R, Liu, L, Meewan, M, Mohan, M, Mao, W, Rock, F.L, Sexton, H, Sheoran, A, Zhang, Y, Zhang, Y, Zhou, Y, Nieman, J.A, Anugula, M.R, Keramane, E.M, Savariraj, K, Reddy, D.S, Sharma, R, Subedi, R, Singh, R, OLeary, A, Simon, N.L, DeMarsh, P.L, Mushtaq, S, Warner, M, Livermore, D.M, Alley, M.R.K, Plattner, J.J.
Deposit date:2013-01-18
Release date:2013-04-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Discovery of a Novel Class of Boron-Based Antibacterials with Activity Against Gram-Negative Bacteria.
Antimicrob.Agents Chemother., 57, 2013
3ZJU
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BU of 3zju by Molmil
Ternary complex of E .coli leucyl-tRNA synthetase, tRNA(Leu) and the benzoxaborole AN3016 in the editing conformation
Descriptor: LEUCYL-TRNA SYNTHETASE, MAGNESIUM ION, TRNALEU5 UAA ISOACCEPTOR
Authors:Cusack, S, Palencia, A, Crepin, T, Hernandez, V, Akama, T, Baker, S.J, Bu, W, Feng, L, Freund, Y.R, Liu, L, Meewan, M, Mohan, M, Mao, W, Rock, F.L, Sexton, H, Sheoran, A, Zhang, Y, Zhang, Y, Zhou, Y, Nieman, J.A, Anugula, M.R, Keramane, E.M, Savariraj, K, Reddy, D.S, Sharma, R, Subedi, R, Singh, R, OLeary, A, Simon, N.L, DeMarsh, P.L, Mushtaq, S, Warner, M, Livermore, D.M, Alley, M.R.K, Plattner, J.J.
Deposit date:2013-01-18
Release date:2013-04-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery of a Novel Class of Boron-Based Antibacterials with Activity Against Gram-Negative Bacteria.
Antimicrob.Agents Chemother., 57, 2013
3BY2
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BU of 3by2 by Molmil
Norwalk P polypeptide (228-523)
Descriptor: 58 kd capsid protein
Authors:Hegde, R, Bu, W.
Deposit date:2008-01-15
Release date:2008-04-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the receptor binding specificity of Norwalk virus.
J.Virol., 82, 2008
3KU4
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BU of 3ku4 by Molmil
Trapping of an oxocarbenium ion intermediate in UP crystals
Descriptor: SULFATE ION, Uridine phosphorylase
Authors:Paul, D, O'Leary, S, Rajashankar, K, Bu, W, Toms, A, Settembre, E, Sanders, J, Begley, T.P, Ealick, S.E.
Deposit date:2009-11-26
Release date:2010-04-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Glycal formation in crystals of uridine phosphorylase.
Biochemistry, 49, 2010
3U90
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BU of 3u90 by Molmil
apoferritin: complex with SDS
Descriptor: CADMIUM ION, DODECYL SULFATE, Ferritin light chain
Authors:Liu, R, Bu, W, Xi, J, Mortazavi, S.R, Cheung-Lau, J.C, Dmochowski, I.J, Loll, P.J.
Deposit date:2011-10-17
Release date:2012-04-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Beyond the detergent effect: a binding site for sodium dodecyl sulfate (SDS) in mammalian apoferritin.
Acta Crystallogr.,Sect.D, 68, 2012
3BY1
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BU of 3by1 by Molmil
Unliganded Norvalk Virus P domain
Descriptor: 58 kd capsid protein
Authors:Hegde, R, Bu, W.
Deposit date:2008-01-15
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structural basis for the receptor binding specificity of Norwalk virus.
J.Virol., 82, 2008
3D26
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BU of 3d26 by Molmil
Norwalk P domain A-trisaccharide complex
Descriptor: 58 kd capsid protein, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)]beta-D-galactopyranose
Authors:Hegde, R, Bu, W.
Deposit date:2008-05-07
Release date:2008-06-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the receptor binding specificity of Norwalk virus.
J.Virol., 82, 2008
3KUK
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BU of 3kuk by Molmil
Trapping of an oxocarbenium ion intermediate in UP crystals
Descriptor: 2'-DEOXYURIDINE, SULFATE ION, Uridine phosphorylase
Authors:Paul, D, O'Leary, S, Rajashankar, K, Bu, W, Toms, A, Settembre, E, Sanders, J, Begley, T.P, Ealick, S.E.
Deposit date:2009-11-27
Release date:2010-04-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.783 Å)
Cite:Glycal formation in crystals of uridine phosphorylase.
Biochemistry, 49, 2010
3KVY
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BU of 3kvy by Molmil
Trapping of an oxocarbenium ion intermediate in UP crystals
Descriptor: 1,4-anhydro-D-erythro-pent-1-enitol, SULFATE ION, URACIL, ...
Authors:Paul, D, O'Leary, S, Rajashankar, K, Bu, W, Toms, A, Settembre, E, Sanders, J, Begley, T.P, Ealick, S.E.
Deposit date:2009-11-30
Release date:2010-04-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Glycal formation in crystals of uridine phosphorylase.
Biochemistry, 49, 2010
3KVR
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BU of 3kvr by Molmil
Trapping of an oxocarbenium ion intermediate in UP crystals
Descriptor: 2,5-anhydro-4-deoxy-D-erythro-pent-4-enitol, 5-FLUOROURACIL, SULFATE ION, ...
Authors:Paul, D, O'Leary, S, Rajashankar, K, Bu, W, Toms, A, Settembre, E, Sanders, J, Begley, T.P, Ealick, S.E.
Deposit date:2009-11-30
Release date:2010-04-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Glycal formation in crystals of uridine phosphorylase.
Biochemistry, 49, 2010
3KVV
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BU of 3kvv by Molmil
Trapping of an oxocarbenium ion intermediate in UP crystals
Descriptor: 1,4-anhydro-D-erythro-pent-1-enitol, 5-FLUOROURACIL, SULFATE ION, ...
Authors:Paul, D, O'Leary, S, Rajashankar, K, Bu, W, Toms, A, Settembre, E, Sanders, J, Begley, T.P, Ealick, S.E.
Deposit date:2009-11-30
Release date:2010-04-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Glycal formation in crystals of uridine phosphorylase.
Biochemistry, 49, 2010

 

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