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PDB: 100 件

4RZQ
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Structural Analysis of Substrate, Reaction Intermediate and Product Binding in Haemophilus influenzae Biotin Carboxylase
分子名称: ADENOSINE-5'-DIPHOSPHATE, Biotin carboxylase, methyl (3aS,4S,6aR)-4-(5-methoxy-5-oxopentyl)-2-oxohexahydro-1H-thieno[3,4-d]imidazole-1-carboxylate
著者Broussard, T.C, Pakhomova, S, Neau, D.B, Champion, T.S, Bonnot, R, Waldrop, G.L.
登録日2014-12-23
公開日2015-06-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structural Analysis of Substrate, Reaction Intermediate, and Product Binding in Haemophilus influenzae Biotin Carboxylase.
Biochemistry, 54, 2015
4X9Q
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MnSOD-3 Room Temperature Structure
分子名称: MALONATE ION, MANGANESE (II) ION, SULFATE ION, ...
著者Hunter, G.J, Trinh, C.H, Hunter, T, Bonetta, R, Stewart, E.E.
登録日2014-12-11
公開日2015-11-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献The structure of the Caenorhabditis elegans manganese superoxide dismutase MnSOD-3-azide complex.
Protein Sci., 24, 2015
4RDV
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The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-formimino-L-Aspartate
分子名称: 1,2-ETHANEDIOL, GLYCEROL, N-FORMIMINO-L-GLUTAMATE IMINOHYDROLASE, ...
著者Fedorov, A.A, Fedorov, E.V, Marti-Arbona, R, Raushel, F.M, Almo, S.C.
登録日2014-09-19
公開日2014-10-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-formimino-L-Aspartate
To be Published
5UG3
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NMR SOLUTION STRUCTURE OF ALPHA-CONOTOXIN GID MUTANT A10V
分子名称: Alpha-conotoxin GID
著者Hussein, A.K, Leffler, A.E, Zebroski, H.A, Powell, S.R, Kuryatov, A, Filipenko, P, Gorson, J, Heizmann, A, Lyskov, S, Nicke, A, Lindstrom, J, Rudy, B, Bonneau, R, Holford, M, Poget, S.F.
登録日2017-01-06
公開日2017-09-06
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Discovery of peptide ligands through docking and virtual screening at nicotinic acetylcholine receptor homology models.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5UG5
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NMR SOLUTION STRUCTURE OF THE ALPHA-CONOTOXIN GID MUTANT V13Y
分子名称: Alpha-conotoxin GID
著者Hussein, A, Leffler, A.E, Kuryatov, A, Zebroski, H.A, Powell, S.R, Filipenko, P, Gorson, J, Heizmann, A, Lyskov, S, Nicke, A, Lindstrom, J, Rudy, B, Bonneau, R, Holford, M, Poget, S.F.
登録日2017-01-06
公開日2017-09-06
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Discovery of peptide ligands through docking and virtual screening at nicotinic acetylcholine receptor homology models.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7LPR
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BU of 7lpr by Molmil
STRUCTURAL BASIS FOR BROAD SPECIFICITY IN ALPHA-LYTIC PROTEASE MUTANTS
分子名称: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-LEUCINE BORONIC ACID INHIBITOR, SULFATE ION
著者Fujishige, A, Bone, R, Agard, D.A.
登録日1991-08-05
公開日1993-01-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis for broad specificity in alpha-lytic protease mutants.
Biochemistry, 30, 1991
3MDW
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The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-formimino-L-Aspartate
分子名称: GLYCEROL, N-[(E)-iminomethyl]-L-aspartic acid, N-formimino-L-Glutamate Iminohydrolase, ...
著者Fedorov, A.A, Fedorov, E.V, Marti-Arbona, R, Raushel, F.M, Almo, S.C.
登録日2010-03-30
公開日2011-03-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8979 Å)
主引用文献Structure of N-Formimino-l-glutamate Iminohydrolase from Pseudomonas aeruginosa.
Biochemistry, 54, 2015
3MDU
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The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-Guanidino-L-Glutamate
分子名称: GLYCEROL, N-carbamimidoyl-L-glutamic acid, N-formimino-L-Glutamate Iminohydrolase, ...
著者Fedorov, A.A, Fedorov, E.V, Marti-Arbona, R, Raushel, F.M, Almo, S.C.
登録日2010-03-30
公開日2011-03-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.4003 Å)
主引用文献Structure of N-Formimino-l-glutamate Iminohydrolase from Pseudomonas aeruginosa.
Biochemistry, 54, 2015
4YIN
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BU of 4yin by Molmil
Crystal structure of the extended-spectrum beta-lactamase OXA-145
分子名称: Beta-lactamase, CITRATE ANION
著者Meziane-Cherif, D, Bonnet, R, Haouz, A, Courvalin, P.
登録日2015-03-02
公開日2016-02-10
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural insights into the loss of penicillinase and the gain of ceftazidimase activities by OXA-145 beta-lactamase in Pseudomonas aeruginosa.
J. Antimicrob. Chemother., 71, 2016
4GDN
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BU of 4gdn by Molmil
Structure of FmtA-like protein
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Protein flp
著者Cougnoux, A, Gibold, L, Delmas, J, Robin, F, Dalmasso, G, Bonnet, R.
登録日2012-08-01
公開日2012-10-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Analysis of Structure-Function Relationships in the Colibactin-Maturating Enzyme ClbP.
J.Mol.Biol., 424, 2012
6DGU
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PER-2 class A extended-spectrum beta-lactamase crystal structure at 2.69 Angstrom resolution
分子名称: Beta-lactamase
著者Power, P, Ruggiero, M, Gutkind, G, Bonomo, R, Klinke, S.
登録日2018-05-18
公開日2019-05-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.691 Å)
主引用文献Structural Insights into the Inhibition of the Extended-Spectrum beta-Lactamase PER-2 by Avibactam.
Antimicrob.Agents Chemother., 63, 2019
4E6W
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ClbP in complex with 3-aminophenyl boronic acid
分子名称: ClbP peptidase, M-AMINOPHENYLBORONIC ACID, PHOSPHATE ION
著者Cougnoux, A, Delmas, J, Bonnet, R.
登録日2012-03-16
公開日2013-03-27
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献The NRP peptidase ClbP as a target for the inhibition of genotoxicity, cell proliferation and tumorogenesis mediated by pks-harboring bacteria
To be Published
5LPR
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STRUCTURAL BASIS FOR BROAD SPECIFICITY IN ALPHA-LYTIC PROTEASE MUTANTS
分子名称: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-ALANINE BORONIC ACID INHIBITOR, SULFATE ION
著者Fujishige, A, Bone, R, Agard, D.A.
登録日1991-08-05
公開日1993-01-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Structural basis for broad specificity in alpha-lytic protease mutants.
Biochemistry, 30, 1991
5AG2
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SOD-3 azide complex
分子名称: ACETATE ION, AZIDE ION, MALONATE ION, ...
著者Hunter, G.J, Trinh, C.H, Bonetta, R, Stewart, E.E, Cabelli, D.E, Hunter, T.
登録日2015-01-27
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献The Structure of the Caenorhabditis Elegans Manganese Superoxide Dismutase Mnsod-3-Azide Complex.
Protein Sci., 24, 2015
6C6I
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BU of 6c6i by Molmil
Crystal structure of a chimeric NDM-1 metallo-beta-lactamase harboring the IMP-1 L3 loop
分子名称: Metallo-beta-lactamase type 2 chimera, ZINC ION
著者Otero, L, Giannini, E, Klinke, S, Palacios, A, Mojica, M, Bonomo, R, Llarrull, L, Vila, A.
登録日2018-01-18
公開日2018-10-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The Reaction Mechanism of Metallo-beta-Lactamases Is Tuned by the Conformation of an Active-Site Mobile Loop.
Antimicrob. Agents Chemother., 63, 2019
6CAC
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BU of 6cac by Molmil
Crystal structure of NDM-1 metallo-beta-lactamase harboring an insertion of a Pro residue in L3 loop
分子名称: CADMIUM ION, CALCIUM ION, COBALT (II) ION, ...
著者Alzari, P.M, Giannini, E, Palacios, A, Mojica, M, Bonomo, R, Llarrull, L, Vila, A.
登録日2018-01-30
公開日2018-10-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献The Reaction Mechanism of Metallo-beta-Lactamases Is Tuned by the Conformation of an Active-Site Mobile Loop.
Antimicrob. Agents Chemother., 63, 2019
6D3G
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BU of 6d3g by Molmil
PER-2 class A extended-spectrum beta-lactamase crystal structure in complex with avibactam at 2.4 Angstrom resolution
分子名称: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, Beta-lactamase, TETRAETHYLENE GLYCOL
著者Power, P, Ruggiero, M, Gutkind, G, Bonomo, R, Klinke, S.
登録日2018-04-16
公開日2019-04-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.398 Å)
主引用文献Structural Insights into the Inhibition of the Extended-Spectrum beta-Lactamase PER-2 by Avibactam.
Antimicrob.Agents Chemother., 63, 2019
2AQV
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BU of 2aqv by Molmil
Crystal Structure of E. coli Isoaspartyl Dipeptidase mutant Y137F
分子名称: Isoaspartyl dipeptidase, ZINC ION
著者Marti-Arbona, R, Thoden, J.B, Holden, H.M, Raushel, F.M.
登録日2005-08-18
公開日2005-12-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Functional significance of Glu-77 and Tyr-137 within the active site of isoaspartyl dipeptidase.
Bioorg.Chem., 33, 2005
4E6X
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ClbP in complex boron-based inhibitor
分子名称: ({[(chloromethyl)sulfonyl]amino}methyl)boronic acid, ClbP peptidase, PHOSPHATE ION
著者Cougnoux, A, Delmas, J, Bonnet, R.
登録日2012-03-16
公開日2013-03-27
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献The NRP peptidase ClbP as a target for the inhibition of genotoxicity, cell proliferation and tumorogenesis mediated by pks-harboring bacteria
To be Published
2PLM
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Crystal structure of the protein TM0936 from Thermotoga maritima complexed with ZN and S-inosylhomocysteine
分子名称: (2S)-2-AMINO-4-({[(2S,3S,4R,5R)-3,4-DIHYDROXY-5-(6-OXO-1,6-DIHYDRO-9H-PURIN-9-YL)TETRAHYDROFURAN-2-YL]METHYL}THIO)BUTANOIC ACID, Uncharacterized protein, ZINC ION
著者Fedorov, A.A, Fedorov, E.V, Hermann, J.C, Marti-Arbona, R, Shoichet, B.K, Raushel, F.M, Almo, S.C.
登録日2007-04-20
公開日2007-07-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-based activity prediction for an enzyme of unknown function
Nature, 448, 2007
2BO9
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Human carboxypeptidase A4 in complex with human latexin.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETONE, ...
著者Pallares, I, Bonet, R, Garcia-Castellanos, R, Ventura, S, Aviles, F.X, Vendrell, J, Gomis-Rueth, F.X.
登録日2005-04-08
公開日2005-04-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of Human Carboxypeptidase A4 with its Endogenous Protein Inhibitor, Latexin.
Proc.Natl.Acad.Sci.USA, 102, 2005
3HUO
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BU of 3huo by Molmil
X-ray crystallographic structure of CTX-M-9 S70G in complex with benzylpenicillin
分子名称: (2R,4S)-2-{(R)-carboxy[(phenylacetyl)amino]methyl}-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, CTX-M-9 extended-spectrum beta-lactamase, PENICILLIN G
著者Delmas, J, Leyssene, D, Dubois, D, Robin, F, Bonnet, R.
登録日2009-06-15
公開日2010-05-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Dynamic view of the early and late steps of the catalytic mechanism mediated by the emerging enzymes CTX-M.
To be Published
3HRE
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X-ray crystallographic structure of CTX-M-9 S70G
分子名称: CTX-M-9 extended-spectrum beta-lactamase, PHOSPHATE ION
著者Delmas, J, Leyssene, D, Dubois, D, Vazeille, E, Robin, F, Bonnet, R.
登録日2009-06-09
公開日2010-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural insights into substrate recognition and product expulsion in CTX-M enzymes.
J.Mol.Biol., 400, 2010
3HLW
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CTX-M-9 S70G in complex with cefotaxime
分子名称: (6R,7R)-3-(acetyloxymethyl)-7-[[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-methoxyimino-ethanoyl]amino]-8-oxo-5-thia-1-azabicy clo[4.2.0]oct-2-ene-2-carboxylic acid, CTX-M-9 extended-spectrum beta-lactamase
著者Delmas, J, Leyssne, D, Dubois, D, Vazeille, E, Robin, F, Bonnet, R.
登録日2009-05-28
公開日2010-06-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural insights into substrate recognition and product expulsion in CTX-M enzymes.
J.Mol.Biol., 400, 2010
3HVF
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BU of 3hvf by Molmil
X-ray crystallographic structure of CTX-M-9 S70G in complex with hydrolyzed benzylpenicillin
分子名称: (2R,4S)-2-{(R)-carboxy[(phenylacetyl)amino]methyl}-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, CTX-M-9 extended-spectrum beta-lactamase
著者Delmas, J, Leyssene, D, Dubois, D, Vazeille, E, Robin, F, Bonnet, R.
登録日2009-06-16
公開日2010-05-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural insights into substrate recognition and product expulsion in CTX-M enzymes.
J.Mol.Biol., 400, 2010

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